mRNA_P-wetherbeei_contig63.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig63.3.1
Unique NamemRNA_P-wetherbeei_contig63.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A7S1BRL8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRL8_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.010e-15
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 1
Query:  223 LREIF-------QEIVALAAARSALSHWAPAVD------ISTPALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSGALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKLQ 543
            LR+IF       +EIVAL+ A  AL    P           TP     +N YFVLL+S+ W  R+WSGP  Y+D SG L +   D  LI+D SFK +VD Y  +D  F++++AAA QKL+
Sbjct:   45 LRDIFYRMGFDDREIVALSGAH-ALGRCHPTASGFDGPWTFTPT--TFNNQYFVLLKSIPWKEREWSGPFQYEDSSGKLMMLATDLVLIQDKSFKKYVDKYAKDDSMFQKDFAAAFQKLE 161          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: C1MYM9_MICPC (L-ascorbate peroxidase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MYM9_MICPC)

HSP 1 Score: 68.6 bits (166), Expect = 3.640e-10
Identity = 51/131 (38.93%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  223 LREIF-------QEIVALAAARSALSHWAPAVDI-----STPALLALDNSYFVLLRSLHWTPRD------------WSGPALYQDGSGALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKLQ 543
            +RE+F       QEIVAL+ A +     A A         TP L   +NSYFVLL+ L WTP D            WS    Y D SG L + P D ALIED  FK +VD Y  + +KF  +++ A  KL+
Sbjct:  139 IREVFNRMGFDDQEIVALSGAHALGRCHADASGYVGPWSGTPTLF--NNSYFVLLKGLKWTPNDKAAKFQARSIAHWSPYDRYTDPSGNLMMLPSDIALIEDPKFKKYVDVYAKDQKKFFDDFSKAFNKLE 267          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A2C5X658_9PEZI (Peroxidase n=2 Tax=Ceratocystis TaxID=5157 RepID=A0A2C5X658_9PEZI)

HSP 1 Score: 56.6 bits (135), Expect = 7.240e-6
Identity = 38/117 (32.48%), Postives = 60/117 (51.28%), Query Frame = 1
Query:  223 LREIF-------QEIVALAAARSALSHWAPAVDISTPALLA---LDNSYFVLLRSLHWTPRDWSGPALYQDGSG-ALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKL 540
            LR+IF       QEIVALA A +             P   +   + N ++ LL    W  R W+GP  Y++ S  +L + P D +LI+D SF+ HV+AY  ++  F +++++   KL
Sbjct:  214 LRDIFYRMGFNDQEIVALAGAHALGRCHTSRSGFDGPWTFSPTVMTNDFYTLLLDEKWQQRKWNGPMQYENKSSKSLMMLPTDLSLIQDKSFRKHVEAYAKDNELFFKDFSSVCLKL 330          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A317XKF1_9BASI (Peroxidase n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XKF1_9BASI)

HSP 1 Score: 56.6 bits (135), Expect = 7.890e-6
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  307 TPALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSG-ALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKL 540
            T A  +  N Y+ LL +  W  R W+GP  ++D S  +L +   D AL++D SFK+HV  Y  ++ +F ++++AA  KL
Sbjct:  288 TFAPTSFTNEYYNLLMNEKWNFRKWNGPPQFEDKSTKSLMMLMTDMALVQDKSFKSHVQRYAKSEDEFFKDFSAAFAKL 366          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A4U7KSW2_9BASI (Peroxidase n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7KSW2_9BASI)

HSP 1 Score: 55.8 bits (133), Expect = 1.430e-5
Identity = 48/163 (29.45%), Postives = 70/163 (42.94%), Query Frame = 1
Query:  187 QDAVAYTIPSLVLREIFQEIVALAAARSALSHWAPAVDISTP---ALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSG-ALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKLQKR*LQH**VKKESKAQFSGRESELLRLFLLLSPAGVPFPF 663
            QD + Y    +   +  QEIVAL+ A +     A       P   A  +  N YF LL +  W  R W+GP  ++D S  +L +   D AL++D SFK HV  Y  ++ +F  ++  A  KL +                 G  +E  +LF      G PF F
Sbjct:  243 QDHLRYIFYKMGFND--QEIVALSGAHALGRCHADRSGFDGPWTFAPTSFTNEYFNLLMNEKWNLRKWNGPPQFEDKSTKSLMMLMTDMALVQDPSFKKHVQRYAKSEDEFFNDFRGAFAKLLE----------------LGVPAENFKLFETKLDGGKPFEF 387          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A081CED2_PSEA2 (Peroxidase n=4 Tax=Ustilaginaceae TaxID=5268 RepID=A0A081CED2_PSEA2)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-5
Identity = 40/117 (34.19%), Postives = 57/117 (48.72%), Query Frame = 1
Query:  223 LREIF-------QEIVALAAARSALSHWAPAVDISTP---ALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSG-ALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKL 540
            LR IF       QEIVAL+ A +             P   A  +  N YF LL    W  R W+GP  ++D S  +L +   D AL++D SFK HV  Y  ++ +F  ++++A  KL
Sbjct:  248 LRHIFYKMGFNDQEIVALSGAHALGRCHTDRSGFEGPWTFAPTSFTNEYFNLLMKEKWNMRKWNGPPQFEDKSTKSLMMLMTDMALVQDKSFKQHVQRYAKSEDEFFTDFSSAFAKL 364          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: CCPR_USTMA (Cytochrome c peroxidase, mitochondrial n=10 Tax=Ustilaginaceae TaxID=5268 RepID=CCPR_USTMA)

HSP 1 Score: 53.9 bits (128), Expect = 6.350e-5
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 1
Query:  307 TPALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSG-ALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKL 540
            T A  +  N YF LL +  W  R W+GP  ++D S  +L +   D AL++D SFK HV  Y  ++ +F  ++ +A  KL
Sbjct:  285 TFAPTSFTNEYFNLLMNEKWNIRKWNGPPQFEDKSTKSLMMLMTDMALVQDPSFKKHVQRYAKSEDEFFNDFRSAYAKL 363          
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Match: A0A316YNB6_9BASI (Peroxidase n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YNB6_9BASI)

HSP 1 Score: 53.5 bits (127), Expect = 8.560e-5
Identity = 27/71 (38.03%), Postives = 40/71 (56.34%), Query Frame = 1
Query:  331 NSYFVLLRSLHWTPRDWSGPALYQDG-SGALTVDPLDRALIEDSSFKAHVDAYGANDRKFRRNYAAALQKL 540
            N Y+ LL +  W  + W+GP  Y D  +G+L +   D AL+EDSSFK HV+ Y  ++  F   ++    KL
Sbjct:  293 NEYYNLLLTEPWVLKKWNGPKQYVDKKTGSLMMLTTDMALVEDSSFKKHVERYAKDEDTFFNEFSNVYAKL 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig63.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A7S1BRL8_9STRA1.010e-1542.50Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
C1MYM9_MICPC3.640e-1038.93L-ascorbate peroxidase n=1 Tax=Micromonas pusilla ... [more]
A0A2C5X658_9PEZI7.240e-632.48Peroxidase n=2 Tax=Ceratocystis TaxID=5157 RepID=A... [more]
A0A317XKF1_9BASI7.890e-636.71Peroxidase n=1 Tax=Testicularia cyperi TaxID=18824... [more]
A0A4U7KSW2_9BASI1.430e-529.45Peroxidase n=1 Tax=Sporisorium graminicola TaxID=2... [more]
A0A081CED2_PSEA22.600e-534.19Peroxidase n=4 Tax=Ustilaginaceae TaxID=5268 RepID... [more]
CCPR_USTMA6.350e-536.71Cytochrome c peroxidase, mitochondrial n=10 Tax=Us... [more]
A0A316YNB6_9BASI8.560e-538.03Peroxidase n=1 Tax=Acaromyces ingoldii TaxID=21525... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig63contigP-wetherbeei_contig63:10037..10839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296587.XP_002505127.1
PFAMsperoxidase
Model size678
Max annot lvl3041|Chlorophyta
KEGG koko:K00428
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.03e-13
EggNOG OGsCOG0685@1|root,2QR1E@2759|Eukaryota,37RD2@33090|Viridiplantae,34KCG@3041|Chlorophyta
EC1.11.1.5
DescriptionBelongs to the peroxidase family
Cds size552
COG categoryE
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186903.0338075-CDS-P-wetherbeei_contig63:10036..104381683186903.0338075-CDS-P-wetherbeei_contig63:10036..10438Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig63 10037..10438 +
1683186903.0429878-CDS-P-wetherbeei_contig63:10563..107131683186903.0429878-CDS-P-wetherbeei_contig63:10563..10713Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig63 10564..10713 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186903.055462-UTR-P-wetherbeei_contig63:10713..108391683186903.055462-UTR-P-wetherbeei_contig63:10713..10839Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig63 10714..10839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig63.3.1prot_P-wetherbeei_contig63.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig63 10037..10713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig63.3.1

>prot_P-wetherbeei_contig63.3.1 ID=prot_P-wetherbeei_contig63.3.1|Name=mRNA_P-wetherbeei_contig63.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
MWRDIDLSSPSRAASSLRAAFHGTGIGDEVGSWRPACCVRQRLWFQLQHS
LQNGCVGFFLRVQDAVAYTIPSLVLREIFQEIVALAAARSALSHWAPAVD
ISTPALLALDNSYFVLLRSLHWTPRDWSGPALYQDGSGALTVDPLDRALI
EDSSFKAHVDAYGANDRKFRRNYAAALQKLQKR*
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mRNA from alignment at P-wetherbeei_contig63:10037..10839+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig63.3.1 ID=mRNA_P-wetherbeei_contig63.3.1|Name=mRNA_P-wetherbeei_contig63.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=803bp|location=Sequence derived from alignment at P-wetherbeei_contig63:10037..10839+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAGAGACATCGACTTGAGCTCTCCTTCACGCGCGGCTTCCAGCCT GCGCGCTGCGTTTCACGGGACAGGGATAGGCGACGAGGTAGGTTCTTGGC GACCTGCGTGTTGCGTTCGGCAGCGTTTATGGTTTCAGCTCCAGCATTCT CTTCAGAATGGCTGTGTTGGCTTCTTCTTGCGAGTCCAGGATGCAGTGGC GTATACAATCCCCTCGCTCGTTCTCCGTGAAATCTTCCAGGAGATTGTGG CGCTCGCCGCGGCTCGCTCCGCCCTCTCCCACTGGGCGCCCGCTGTGGAC ATATCAACACCCGCGCTGTTGGCTTTGGATAATTCGTATTTCGTGCTTCT GCGGAGCCTCCACTGGACACCGCGTGACTGGAGCGGCCCGGCCCTCTATC AGGTTCGCCCTAACATTCTAATGCCTTTTTTTCGGTCCTTGTGATCGCCG TGAGAAGCACAGCTGCCGAACGTGGTTTATTGCTGAAATACGCGCTTCCT GCACACCTCCTGTTACCTGCTATGCAGGATGGGAGCGGTGCGCTGACGGT GGATCCTCTGGACCGGGCACTGATCGAAGACTCCAGCTTCAAGGCGCATG TAGACGCGTACGGGGCAAATGACCGAAAGTTTCGGCGTAACTATGCAGCA GCGCTTCAGAAGCTGCAGAAGCGGTAATTGCAACACTGATAGGTTAAGAA GGAAAGCAAAGCCCAGTTTTCTGGCAGGGAGAGTGAGCTCTTGCGTCTTT TTTTACTCTTATCTCCAGCTGGGGTGCCTTTTCCTTTTCTTGGATGGCGC AGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig63:10037..10839+

>mRNA_P-wetherbeei_contig63.3.1 ID=mRNA_P-wetherbeei_contig63.3.1|Name=mRNA_P-wetherbeei_contig63.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig63:10037..10839+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAGAGACATCGACTTGAGCTCTCCTTCACGCGCGGCTTCCAGCCT
GCGCGCTGCGTTTCACGGGACAGGGATAGGCGACGAGGTAGGTTCTTGGC
GACCTGCGTGTTGCGTTCGGCAGCGTTTATGGTTTCAGCTCCAGCATTCT
CTTCAGAATGGCTGTGTTGGCTTCTTCTTGCGAGTCCAGGATGCAGTGGC
GTATACAATCCCCTCGCTCGTTCTCCGTGAAATCTTCCAGGAGATTGTGG
CGCTCGCCGCGGCTCGCTCCGCCCTCTCCCACTGGGCGCCCGCTGTGGAC
ATATCAACACCCGCGCTGTTGGCTTTGGATAATTCGTATTTCGTGCTTCT
GCGGAGCCTCCACTGGACACCGCGTGACTGGAGCGGCCCGGCCCTCTATC
AGGATGGGAGCGGTGCGCTGACGGTGGATCCTCTGGACCGGGCACTGATC
GAAGACTCCAGCTTCAAGGCGCATGTAGACGCGTACGGGGCAAATGACCG
AAAGTTTCGGCGTAACTATGCAGCAGCGCTTCAGAAGCTGCAGAAGCGGT
AA
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