mRNA_P-wetherbeei_contig628.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: D8LK15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK15_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.610e-30 Identity = 140/416 (33.65%), Postives = 208/416 (50.00%), Query Frame = 2
Query: 416 KRPRQREDTCDGGS-HRGEDRPAAGPVASLGAIKGRQAVLATCYDGKEGRATKELLNILNAQADLLYPAETTVGNSIGGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA--LSIEEQIRREVLELRAGSGEHARFVPVRTDTRGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLLVAALPPL-----PLGPAAPGTTPGAAALASAMGTGVKTATNVAPSDAAENSDAMPVRPGRDSVSESAPASPMATAAASGSGAASEAARXLHXXXXXXXXXXXXXXXXXXXXXXXXXPKAAAPTEAPPDGSRRFRIDLHRRSTGPERVAVITALAALVPPCHRVDLGNPEVTVIVEMIRGLCGVSVVTDFVENCRYSVRQLQE 1639
KRPR+ E +GGS G +P +LG +KG QAV+ TC + +AT EL+++LN+ AD +YP ET ++ ++ XXXXXXX A +S+EE +++E LR+GS + RF V T +GVV CV+D +D+ RL+ + EIR T+ R+ RFL R++P+ T Y+ L+ + GP++ ALPP+ PL P A + A TG + A ++S V+ E G GAA+ A XXXXXXXXXXXXXXXXX D +FR D+ RR++G +R+ +I A V H V++ +PEVT++VE ++ + GVSV+ ++ N YS+ +LQ+
Sbjct: 14 KRPREGEQDGNGGSGDEGPKKPRRTAAINLGNVKGHQAVVGTCDVRHDRQATAELVDMLNSVADDMYP-ETDGDDAAAEDAATASPVAPTPSAEGKPGNGDSDGARAXXXXXXXPAGGAAEMSVEEMVKQEADALRSGSDKVHRFKSVNTSVKGVVMVCVVDPKVDILRLVDTLYDEIRTTKMRRSRFLERVTPLQVTAYSELDAIKEAVGPIVSKALPPVAEEVPPL--------PTAVRASGAKATGPAAVKTEKGTPAPKDSSGDKVKAAETEEKE-------------GEGAAASAPNGTGDXXXXXXXXXXXXXXXXXEGDVVSDGNEKKTC----DKRWKFRADIRRRNSGLKRLDLINAAVGSVGVGHSVNMTSPEVTIVVEAVKSVVGVSVLFNYARNHEYSISRLQD 403
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A485LP66_9STRA (Aste57867_24027 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP66_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 4.590e-9 Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 2
Query: 512 KGRQAVLATCYDGKEGRATKELLNILNAQADLLYPAETTVGNSIGGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSIEEQIRREVLELR--AGSGEHARFVPVRTDTRGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLL 1048
KG AVL TC KE + K++LNILN AD+LYP + + N+ XXXXXXXXXX S E ++ E+ L+ A +G+ RF + + +G++ LD +DV +++ F +++ T + RF+ R+ P+ CY ++ED+ A P +
Sbjct: 32 KGFSAVLVTCDKTKERQVVKDILNILNDTADILYPKK------VDENADDXXXXXXXXXXAKPK-----------------------SSAEMLQEEIAGLKKDAKAGKTGRFTALDSGVKGIILVQFLDESMDVKKVIDHIFQQVQNTMEFSSRFIQRMIPLEKMCYPSVEDITACATPFI 183
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: W4GL36_9STRA (THUMP domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GL36_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.900e-8 Identity = 47/181 (25.97%), Postives = 80/181 (44.20%), Query Frame = 2
Query: 512 KGRQAVLATCYDGKEGRATKELLNILNAQADLLYPA--ETTVGNSIGGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSIEEQIRREVLELRAGSGEHARFVPVRTDTRGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLL 1048
KG AVL TC KE + K++LNILN AD+LYP + V S N+ +A ++E+I L+ A + RF + + +G++ LD +DV +++ F ++++T + RF+ R+ P+ CY ++ED+ A P +
Sbjct: 31 KGFSAVLVTCDKTKERQCVKDILNILNDAADVLYPMKDDKVVDASAADNAATADDDESKPTKT-----------------------SADLLQEEIAG--LKKDAKDRKTGRFSALDSGVKGIILVQFLDESMDVKKVIDHIFEQVQKTMEFSSRFIQRMIPLEKLCYPSVEDITACATPFI 186
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A4Y7LEP0_PAPSO (THUMP domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LEP0_PAPSO) HSP 1 Score: 58.5 bits (140), Expect = 2.220e-7 Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 2
Query: 1448 RRSTGPERVAVITALAALVPPCHRVDLGNPEVTVIVEMIRGLCGVSVVTDFVENCRYSVRQL 1633
R +TG +R+ +I A+A VP H+VDL NP+ T+IVE+ + LC + VV + E +Y++RQL
Sbjct: 10 RANTGIDRMKIINAVAKSVPEPHKVDLSNPDKTIIVEICKTLCCIGVVEKYKELSKYNLRQL 71
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A6G0WID4_9STRA (THUMP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WID4_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.230e-7 Identity = 46/183 (25.14%), Postives = 77/183 (42.08%), Query Frame = 2
Query: 512 KGRQAVLATCYDGKEGRATKELLNILNAQADLLYPA--ETTVGNSIGGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSIEEQIRREVLELR--AGSGEHARFVPVRTDTRGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLL 1048
KG A+L TC KE + K++LNILN A+++YP E T S A + E ++ E+ L+ A G RF + + +G++ LD +DV R++ F ++ T++ RF+ R+ P+ CY ++ED+ A P +
Sbjct: 30 KGSSALLVTCDRIKERQVVKDILNILNDVAEVMYPGTKEDTAEKS---------------------------------------ESKAKTSAELLQDEIAGLKKDAKEGSTGRFAALDSGVKGIILVQFLDESMDVKRIVDHIFQQVVDTKEFASRFIQRMIPLEKLCYPSVEDIAECAKPFI 173
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A5A7UCI1_CUCME (THUMP domain-containing protein 1-like protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7UCI1_CUCME) HSP 1 Score: 58.5 bits (140), Expect = 3.640e-7 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 2
Query: 1448 RRSTGPERVAVITALAALVPPCHRVDLGNPEVTVIVEMIRGLCGVSVVTDFVENCRYSVRQL 1633
R +TG +R +I +A VP H+VDL NPE T++VE+++ +C + VV + E +Y++RQL
Sbjct: 29 RANTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGVVEKYKEFSKYNLRQL 90
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A7J6UZP4_THATH (Thump domain-containing protein 1-like protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6UZP4_THATH) HSP 1 Score: 61.6 bits (148), Expect = 4.170e-7 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 2
Query: 1397 PTEAPPDGSRRFRIDLHRRS-TGPERVAVITALAALVPPCHRVDLGNPEVTVIVEMIRGLCGVSVVTDFVENCRYSVRQL 1633
P EA +F + R+ TG +R+A+I A+A VP H+VDL NP+ ++IV++ + +C + VV + E C+Y++RQL
Sbjct: 137 PAEAEAQTPLKFAVLYDARANTGIDRMAIIKAVAKAVPAPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELCKYNLRQL 216
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A024TR85_9STRA (THUMP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TR85_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 7.120e-7 Identity = 54/179 (30.17%), Postives = 89/179 (49.72%), Query Frame = 2
Query: 512 KGRQAVLATCYDGKEGRATKELLNILNAQADLLYPAETTVGNSIGGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSIEEQIRREVLELRAGSGEHARFVPVRTDTRGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLL 1048
KG AVL TC KE + K++LNILN AD+LYP + + XXXXXXXXXXX +A ++E+I + L+ A + RF + + +G++ LD +DV +++ F ++++T + RF+ R+ P+ CY ++E++ A P +
Sbjct: 30 KGFSAVLVTCDKTKERQVVKDILNILNDAADVLYPTQDDEDDG-------------------------RXXXXXXXXXXXKPKSSAELLQEEI--DGLKNDAKIRKTGRFSALDSGVKGIILVQFLDQTMDVKKIIGHIFDQVQKTMEFSSRFIQRMIPLEKLCYPSVEEIAACATPFI 181
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A835Z5R2_9STRA (THUMP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.010e-6 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 2
Query: 863 RGVVAACVLDAGIDVSRLLSAAFVEIRRTRQRQCRFLVRLSPMTATCYAALEDVVRTAGPLL 1048
RGVV CVLD +D+ + + F ++R+T+ R+ RFL+R P+ TCY E +V A PL+
Sbjct: 2 RGVVVVCVLDKTLDIVSITAELFSDVRKTKVRRSRFLIRAVPLATTCYGDAESLVGIAKPLV 63
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Match: A0A2V0P2T2_9CHLO (THUMP domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2T2_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 1.840e-6 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 2
Query: 1430 FRIDLHRRS-TGPERVAVITALAALVPPCHRVDLGNPEVTVIVEMIRGLCGVSVVTDFVENCRYSVRQLQED 1642
F + + RRS G ++ ++ A VPP H+V+LG+P+ TV+V++IR +C V+V F E C+Y+VR ED
Sbjct: 211 FGVVVERRSFNGLDQKDIVDVFAKAVPPPHKVNLGDPDKTVLVQLIRNVCAVAVAPRFKELCKYNVRVAAED 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig628.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig628.4.1 >prot_P-wetherbeei_contig628.4.1 ID=prot_P-wetherbeei_contig628.4.1|Name=mRNA_P-wetherbeei_contig628.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=427bp MKRGHRSGGSGGGGGRGKRPRQREDTCDGGSHRGEDRPAAGPVASLGAIKback to top mRNA from alignment at P-wetherbeei_contig628:7685..9329+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig628.4.1 ID=mRNA_P-wetherbeei_contig628.4.1|Name=mRNA_P-wetherbeei_contig628.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1645bp|location=Sequence derived from alignment at P-wetherbeei_contig628:7685..9329+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig628:7685..9329+ >mRNA_P-wetherbeei_contig628.4.1 ID=mRNA_P-wetherbeei_contig628.4.1|Name=mRNA_P-wetherbeei_contig628.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig628:7685..9329+ (Phaeothamnion wetherbeei SAG_119_79)back to top |