mRNA_P-wetherbeei_contig627.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig627.2.2
Unique NamemRNA_P-wetherbeei_contig627.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: F2TX10_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TX10_SALR5)

HSP 1 Score: 139 bits (349), Expect = 1.100e-31
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 2 
Query:  251 FASRALSEDEQRRIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAIMRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRKEA 715
            F   A SEDE+ RIQ+ L   L  D I  R G GG ++ YV       +AN+ FGFNGWS  +  +  D    D+  S Y++GVSA++RVTLKDG+YHED+GYG AIM +  QAM+KAKKQAVTD  KR+L++FG+  G  +N+K+    IR  A
Sbjct:   22 FGGVAFSEDERDRIQKALNMKLGADFISYRPGAGGNEIAYVQQWMVFDIANHTFGFNGWSRSIRAVNIDYA--DKKGSKYEVGVSAIIRVTLKDGAYHEDIGYGNAIMPTRHQAMEKAKKQAVTDGTKRSLKMFGQIFGQCLNDKDYQRFIRPHA 174
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A2P6NCY6_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCY6_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 2.540e-30
Identity = 69/153 (45.10%), Postives = 104/153 (67.97%), Query Frame = 2 
Query:  251 FASRALSEDEQRRIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAIMRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            F   ++SE+E+  I E L + L  D++++R G  G+   Y+   + + +AN IFGFNGWSC+V  +  D    +Q   M+KIGV+A+V+V LKDG+YHED+G+G    + +  A++KAKK+AVTDARKRALR+FG  LGN + NK+ +  ++K
Sbjct:    8 FGHISISEEERAHITEQLRRKLTPDEVKTRPGTHGE-FTYIEGWKAVELANEIFGFNGWSCQVVVVVIDF--VEQVGEMFKIGVTAIVKVVLKDGAYHEDVGFGTGEDKRKGIAIEKAKKEAVTDARKRALRIFGNRLGNCLYNKQYLSEMKK 157
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A550CBP6_9AGAR (Uncharacterized protein (Fragment) n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550CBP6_9AGAR)

HSP 1 Score: 125 bits (314), Expect = 9.490e-30
Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 2 
Query:  194 GSINVKDNMASPGGAADGAFASRALSEDEQRRIQ---ETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAIMR-SETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            G + +K   A    +A  A  +  L+ D Q  IQ     L Q L  + + +R G GG K+ Y    + I +AN +FGFNGWS  V  L TD    D+ +  Y +GV+++VRVTL+DG++HED+GYG+   + ++ QA+DKAKK+AVTD  KRALR FG  LGN + +K   + + K
Sbjct:    4 GGLQIKQESAVASTSASAASHAGGLTTDSQFNIQAFKHKLNQKLGPEYLSTRPGGGGTKLTYTAGWQIINLANEVFGFNGWSTNVISLTTDF--IDEKNGRYSVGVTSIVRVTLRDGAFHEDIGYGQGDNQPNKGQALDKAKKEAVTDGMKRALRHFGNVLGNCLYDKSYTDRVAK 177
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A166WH72_9AGAM (Recombination protein Rad52 (Fragment) n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166WH72_9AGAM)

HSP 1 Score: 125 bits (313), Expect = 1.100e-29
Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 2 
Query:  287 RIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAIMRSETQ--AMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            R+Q  L Q L  + I  R GPGG+K+ Y    + I +AN +FGFNGWS  +  L  D   F++ S  + +GVSA+VRVTL+DG++HED+GYG  +  S+T+  A+DK KK+AVTDA KRALR FG  +GN + +K   + + K
Sbjct:   24 RLQAKLNQKLGPEYISQRPGPGGQKLTYAEGWKIINLANEVFGFNGWSSSIVNLSIDTTDFNEESRKWSVGVSAIVRVTLRDGTFHEDIGYG-ILENSKTKGPALDKCKKEAVTDALKRALRNFGNLMGNCLYDKSYTQEVVK 165
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A8C6WCS8_NANGA (RAD52 homolog, DNA repair protein n=1 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6WCS8_NANGA)

HSP 1 Score: 126 bits (317), Expect = 4.480e-29
Identity = 71/167 (42.51%), Postives = 105/167 (62.87%), Query Frame = 2 
Query:  212 DNMASPGGAADGAFASRALSEDEQRRIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAI-MRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            D+  S GG +   F     + +E + IQ+ L Q L  + I SR+  GG+KV Y+     I++AN +FG+NGW+  +TQ   D    D  +  + +GV A VRV LKDGSYHED+GYG +  ++S+  +++KA+K+AVTD  KRALR FG ALGN I +K+ + ++ K
Sbjct:   13 DSHPSAGGKSVLCFGQNQYTAEEYQAIQKALRQRLGPEYISSRISGGGQKVSYIEGHRVISLANEMFGYNGWAHSITQQNVDF--VDLNNGKFYVGVCAFVRVQLKDGSYHEDVGYGVSEGLKSKALSLEKARKEAVTDGLKRALRCFGNALGNCILDKDYLRSLNK 177
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A120E6U7_9BASI (Uncharacterized protein n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A120E6U7_9BASI)

HSP 1 Score: 124 bits (311), Expect = 4.800e-29
Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 2 
Query:  287 RIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAI-MRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIR 706
            ++Q+ L + L  D I SR G GG K++Y+     I +AN +FGFNGW   +  L+ D   FD  S  + +GV+A+VRV L+DGS HED+GYG+    RS+ +A+DK+KK+AVTD  KRALR FG+ LGN + +K  +E I+
Sbjct:   11 KLQQILNKTLGADYIASRQGGGGSKLNYLEGWRAINLANEVFGFNGWFTDIKYLEADFVDFDPASERWHVGVTAIVRVRLQDGSSHEDVGYGKMENCRSKGEALDKSKKEAVTDGLKRALRHFGKLLGNCLYDKHYLEHIK 151
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: M2QTS8_CERS8 (Uncharacterized protein (Fragment) n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QTS8_CERS8)

HSP 1 Score: 122 bits (306), Expect = 6.420e-29
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 2 
Query:  266 LSEDEQRRI---QETLEQGLQGDQIRSRLGPGG-KKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAIMRSETQ--AMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            L+ED  ++I   Q  L++ L  + I +R GPGG  K+ Y    + I +AN +FGFNGWS  V  L TD   F++ S  Y +GV+AVVRVTL+DG YHED+GYG  +  S+T+  A+DK KK+AVTDA KRALR FG  LGN + +K+  + + K
Sbjct:    3 LTEDTAKKIATLQAKLDRKLGPEYISTRPGPGGGPKLTYAEGWKIINLANEVFGFNGWSSSVVNLTTDYVDFNEESKRYNVGVTAVVRVTLRDGVYHEDVGYGN-LENSKTKGPALDKCKKEAVTDAVKRALRNFGNLLGNCLYDKQYAQEVVK 155
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: C6H831_AJECH (RAD52 DNA repair protein RADC n=1 Tax=Ajellomyces capsulatus (strain H143) TaxID=544712 RepID=C6H831_AJECH)

HSP 1 Score: 123 bits (309), Expect = 9.550e-29
Identity = 64/141 (45.39%), Postives = 92/141 (65.25%), Query Frame = 2 
Query:  290 IQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAI-MRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            +Q  L++ L  + I SR GPGG+KV Y+ A + I +AN +FGFNGWS  +  +Q D    +  ++   +G+S +VRVTLKDG++HED+GYG     +S+  A +KAKK+  TDA KRALR FG  LGN + +KE +  + K
Sbjct:   46 LQSRLDKRLGPEYISSRQGPGGQKVHYLAAEKCINLANEVFGFNGWSSSIQNIQIDFVDENPNTAKISLGLSVIVRVTLKDGTFHEDIGYGHCENSKSKALAFEKAKKEGTTDALKRALRTFGNVLGNCVYDKEYLSRVTK 186
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A4P9WT04_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WT04_9FUNG)

HSP 1 Score: 123 bits (308), Expect = 9.710e-29
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 2 
Query:  245 GAFASRALSEDEQRRIQETLEQGLQGDQIRSRLGPGGKKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAI-MRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            G F +   ++DE   +   L+Q L  + I  R GPGG K+ Y+  G+ + +AN IFG+NGWS  V +   D    D G     +G+S +VRVTLKDG++HED+GYG     RS+  A +KAKK+AV+D  KRALRLFG ++GN + +K  I  I+K
Sbjct:   10 GTFGTHVFTDDEAHLMSAKLKQRLGPEFISERSGPGGAKISYLEIGKALDLANEIFGYNGWSSSVGETVIDYVDPDHGK--ISLGISCIVRVTLKDGTFHEDIGYGSIENARSKGMAFEKAKKEAVSDGIKRALRLFGNSVGNCLYDKGFIAKIKK 163
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BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Match: A0A0J1B315_9TREE (Uncharacterized protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J1B315_9TREE)

HSP 1 Score: 125 bits (313), Expect = 1.220e-28
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 2 
Query:  269 SEDEQRRIQETLEQGLQGDQIRSRLGPGG-KKVDYVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVRVTLKDGSYHEDLGYGEAI-MRSETQAMDKAKKQAVTDARKRALRLFGEALGNSINNKEKIEAIRK 709
            SED+   +Q  L++ L  + +  R GPGG  K+ Y+   + I +AN +FGFNGWS  +T+LQTD    D    + K+G++A++R+TLKDG YHEDLGYG A  +R +  A++KA+K+AVTD  KRAL+ FG  LGN + ++E  + ++K
Sbjct:    9 SEDKVATLQARLQKKLGPEYVTQRAGPGGGPKLSYIEGWKVINLANEVFGFNGWSSSITRLQTDFLDVDANERV-KVGITAIIRITLKDGCYHEDLGYGHAENIRGKAMALEKAQKEAVTDGIKRALKHFGNVLGNCLYDREYTKEVQK 156
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig627.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2TX10_SALR51.100e-3149.03Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A2P6NCY6_9EUKA2.540e-3045.10Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A550CBP6_9AGAR9.490e-3041.48Uncharacterized protein (Fragment) n=1 Tax=Auricul... [more]
A0A166WH72_9AGAM1.100e-2946.85Recombination protein Rad52 (Fragment) n=1 Tax=Fib... [more]
A0A8C6WCS8_NANGA4.480e-2942.51RAD52 homolog, DNA repair protein n=1 Tax=Nannospa... [more]
A0A120E6U7_9BASI4.800e-2946.81Uncharacterized protein n=1 Tax=Rhodotorula sp. JG... [more]
M2QTS8_CERS86.420e-2948.05Uncharacterized protein (Fragment) n=1 Tax=Ceripor... [more]
C6H831_AJECH9.550e-2945.39RAD52 DNA repair protein RADC n=1 Tax=Ajellomyces ... [more]
A0A4P9WT04_9FUNG9.710e-2944.23Uncharacterized protein n=1 Tax=Blyttiomyces helic... [more]
A0A0J1B315_9TREE1.220e-2844.97Uncharacterized protein n=1 Tax=Cutaneotrichosporo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig627contigP-wetherbeei_contig627:3044..5699 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog946362.XP_004998095.1
Preferred nameRAD52
PFAMsRad52_Rad22
Model size1789
Max annot lvl33154|Opisthokonta
KEGG koko:K10873
KEGG Pathwayko03440,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000150,GO:0000228,GO:0000278,GO:0000280,GO:0000709,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000727,GO:0000729,GO:0000730,GO:0000733,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006277,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007530,GO:0007531,GO:0007533,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010520,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010639,GO:0010792,GO:0010946,GO:0010947,GO:0010948,GO:0016043,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0031297,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032200,GO:0032392,GO:0032502,GO:0032505,GO:0032991,GO:0032993,GO:0033043,GO:0033260,GO:0033554,GO:0034599,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0035861,GO:0040020,GO:0042221,GO:0042592,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0044786,GO:0045002,GO:0045003,GO:0045005,GO:0045027,GO:0045128,GO:0045165,GO:0045786,GO:0045835,GO:0045910,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060249,GO:0060255,GO:0060631,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090329,GO:0090734,GO:0090735,GO:0097159,GO:0097617,GO:0110026,GO:0110027,GO:0110029,GO:0140013,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902298,GO:1902969,GO:1903046,GO:1903047,GO:1990426,GO:1990505,GO:1990814,GO:2000104,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2000819,GO:2001020
Exons4
Evalue2.79e-33
EggNOG OGsCOG5055@1|root,KOG4141@2759|Eukaryota,395YF@33154|Opisthokonta
Descriptiondouble-strand break repair via single-strand annealing
Cds size1365
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig627.2.2prot_P-wetherbeei_contig627.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig627 3251..5482 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186901.4290242-UTR-P-wetherbeei_contig627:3043..32501683186901.4290242-UTR-P-wetherbeei_contig627:3043..3250Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig627 3044..3250 -
1683186901.4822748-UTR-P-wetherbeei_contig627:5482..56991683186901.4822748-UTR-P-wetherbeei_contig627:5482..5699Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig627 5483..5699 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186901.4411855-CDS-P-wetherbeei_contig627:3250..42061683186901.4411855-CDS-P-wetherbeei_contig627:3250..4206Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 3251..4206 -
1683186901.451535-CDS-P-wetherbeei_contig627:4561..47271683186901.451535-CDS-P-wetherbeei_contig627:4561..4727Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 4562..4727 -
1683186901.4624717-CDS-P-wetherbeei_contig627:5083..52451683186901.4624717-CDS-P-wetherbeei_contig627:5083..5245Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 5084..5245 -
1683186901.4727867-CDS-P-wetherbeei_contig627:5401..54821683186901.4727867-CDS-P-wetherbeei_contig627:5401..5482Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig627 5402..5482 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig627.2.2

>prot_P-wetherbeei_contig627.2.2 ID=prot_P-wetherbeei_contig627.2.2|Name=mRNA_P-wetherbeei_contig627.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp
MASPGGAADGAFASRALSEDEQRRIQETLEQGLQGDQIRSRLGPGGKKVD
YVMAGEQIAMANNIFGFNGWSCRVTQLQTDVHRFDQGSSMYKIGVSAVVR
VTLKDGSYHEDLGYGEAIMRSETQAMDKAKKQAVTDARKRALRLFGEALG
NSINNKEKIEAIRKEAAGSAAAGAARLYHQQGGRGGGGGGRGGTGSDGQA
GPQGNVAVPRHRPPTAFVPGPQHAPTMRAAPVPVVAVGAAAAPPKAAVTA
VPAPPAKSAAPVASAPGTGAGPAATSSGTPPTAAPEQQPAQLQQSTRQSP
PVLQVQQQQQAGRPLQGRENQQHPQQHQYQPSPPQQQQQQLDFSRQQQQQ
QHRQYHPQQLQQPQQHHHHQQQRAPPIEQGASVAGYNYQTAAAMFGPAGP
GTPAKGTAQPQPASSIGPASPASGQDEFGWPEGLDFPTETGAGSDGNPAK
RQRQ*
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mRNA from alignment at P-wetherbeei_contig627:3044..5699-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig627.2.2 ID=mRNA_P-wetherbeei_contig627.2.2|Name=mRNA_P-wetherbeei_contig627.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2656bp|location=Sequence derived from alignment at P-wetherbeei_contig627:3044..5699- (Phaeothamnion wetherbeei SAG_119_79)
GACTCTTCCCGCGTGCTCTCTCGAAAGCCTAGGAGAAGCGCAAAAAGCGG
TGGTCAGAGACGGCATAGGCGGGCAGAGTCGCCGGACGAGGCTGGAAGTG
AATTCGCTGTGACAGGGACAGACAGAGAAAGTCTCCAACGGTGGCTTGCA
CCTTCCTCGTTTACGCCGTCGTCCGGTTCTGCACTTGGGCTTTGGGAGCA
TCAACGTTAAGGACAATATGGCGTCGCCCGGTGGGGCGGCAGACGGAGCG
TTCGCCTCTCGCGCGCTCTCCGAAGACGAGCAACGCAGGATTCAGGAGGT
GTGTGGGCGATCAACTGAAAACCTTCCTGATTCCTGCAACACATTCCAAT
TGAGAAGAAAAGTCGCCGTGCCTGCTGCTCCCCGCCGACGCGTACGTGCT
GCTCCATGTCGACACTTTGCGTGCTGCACCGCACCGACGCTTTCCGCGCT
GCAGACTCTGGAACAAGGGCTTCAGGGAGACCAAATCCGATCGCGCTTGG
GCCCTGGGGGAAAGAAAGTTGACTATGTGATGGCAGGAGAGCAAATCGCA
ATGGCGAACAACATCTTCGGTTTCAACGGCTGGTCTTGTCGAGTGACACA
GCTGCAGACCGACGTGGTGAGCCACAATCCACGGCAATATGGTTGCGGTG
GCATCGCTTTGCAAGGAAGCATTCCATGCTTGATGCTTCCTTATAAAGAT
GTACCTCTATAGCTTTATTGCGCTGCCTCTGTTGTGTCAAAACGGACTAA
ATTCGCTTCGATACTCCGCGTGCCACCATCCGACTTTTCCCCTTTGTCAC
CTGTCGCCGGTTGCCGCTGCCATTGCCGCCGCCGCCTCCTCCTCCTGCCA
CTGCCCCCGCCGCCGCGCGCTGCGGCCACTGCCGACGCCAGCTGCCGCCC
CGCCACTGCTCTCAACCGCCGCACCACTCCGCGCCGTCGCCGCCGCCGCC
GCCGCCACTGCCACCGTGACAGCACCGATTCGATCAAGGGAGCAGCATGT
ACAAGATCGGCGTGTCGGCGGTCGTCCGCGTGACGCTCAAAGACGGCAGC
TACCACGAAGACTTGGGATACGGGGAGGCCATCATGCGCTCCGAGACGCA
GGCAATGGACAAGGCGAAAAAGCAGGCCGTGACCGATGGTGAGCCGACCG
ACCGAGCCGCCCAACTGATCGGAGGGCGCTTTTTGCTTTTTCTCCCGTTC
CGGCCGGTTGTCTCTTTCCTCTTGGCAGAAGGGGAAAGATGCCCGACAAA
TGCCGGCGGCGTGGCAGAGCTCTGGCTCGCGGGAAGTTTACGGCACCAGA
AGCGCTGACGAGGGTGCAAAGTTTGCGGCATTTTGTGCGCATGATAGTTG
TTTAGCCGCTCATCTCCTCTTCTCCTGTCGATGCCTGCCGCTCTTGTCAT
TTTGTCTTCTCCCACCTCGCCCCGCCGCGACGGCCGCCGTCTTCTCTCGC
TGCTGCTGCTGCCGCCGCTCCCGCCTGCGCGCCGCCGCCGCAGCTCGCAA
GCGGGCGCTGCGGCTGTTCGGCGAGGCCCTCGGCAACTCCATCAACAATA
AGGAGAAGATTGAGGCCATCCGTAAGGAGGCGGCGGGATCGGCGGCGGCG
GGCGCGGCACGCCTGTACCATCAGCAGGGCGGCCGTGGCGGCGGCGGGGG
CGGTCGCGGCGGGACCGGAAGCGACGGCCAGGCGGGGCCACAAGGCAACG
TCGCCGTCCCTCGGCACCGGCCGCCGACCGCATTCGTTCCGGGGCCGCAG
CACGCGCCAACCATGCGCGCAGCGCCTGTACCGGTGGTAGCGGTGGGTGC
GGCGGCTGCGCCACCAAAAGCAGCAGTGACGGCGGTGCCGGCGCCGCCCG
CGAAATCGGCGGCCCCAGTGGCGTCGGCCCCCGGTACTGGGGCCGGGCCA
GCTGCGACTTCAAGTGGCACTCCGCCAACGGCAGCGCCGGAGCAGCAGCC
TGCCCAGCTGCAGCAGTCAACTCGGCAGTCGCCGCCCGTGCTGCAGGTGC
AGCAGCAGCAACAGGCGGGGCGGCCTCTGCAGGGTAGGGAGAACCAGCAG
CACCCGCAGCAGCATCAGTACCAGCCATCGCCACCGCAGCAGCAGCAACA
GCAGCTTGACTTCTCACGCCAGCAACAGCAGCAGCAGCACCGTCAGTACC
ACCCGCAGCAGCTACAGCAACCGCAACAGCACCATCACCACCAGCAGCAG
CGCGCGCCGCCAATCGAGCAGGGGGCTTCCGTGGCGGGTTACAACTACCA
GACCGCCGCCGCCATGTTTGGCCCGGCTGGCCCGGGCACGCCAGCGAAGG
GGACGGCGCAACCGCAGCCGGCATCGTCGATCGGCCCTGCGTCACCGGCA
AGCGGCCAGGACGAATTCGGCTGGCCGGAAGGCCTCGATTTCCCGACAGA
GACAGGAGCGGGTAGCGACGGCAACCCCGCAAAGCGGCAGCGGCAGTGAG
GCCCGTGCAATACCGGCTCGGCGCGGGCCTGCAGCACAAGCACATCAATG
TGTACATGGGGAGAGCTGCTCGCGGCGCCGCGGATGCCAGGTTGCAGCGC
TGGCCGTCTGGGGCGGGCGACAGAAAAGGGATGGTGGGGAAGCGGGCGGG
AGAGCGGCTTGGAGCGTTGTCTGAGGGCGGAGCTTCTCAACACATTGTTC
TTGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig627:3044..5699-

>mRNA_P-wetherbeei_contig627.2.2 ID=mRNA_P-wetherbeei_contig627.2.2|Name=mRNA_P-wetherbeei_contig627.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig627:3044..5699- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTCGCCCGGTGGGGCGGCAGACGGAGCGTTCGCCTCTCGCGCGCT
CTCCGAAGACGAGCAACGCAGGATTCAGGAGACTCTGGAACAAGGGCTTC
AGGGAGACCAAATCCGATCGCGCTTGGGCCCTGGGGGAAAGAAAGTTGAC
TATGTGATGGCAGGAGAGCAAATCGCAATGGCGAACAACATCTTCGGTTT
CAACGGCTGGTCTTGTCGAGTGACACAGCTGCAGACCGACGTGCACCGAT
TCGATCAAGGGAGCAGCATGTACAAGATCGGCGTGTCGGCGGTCGTCCGC
GTGACGCTCAAAGACGGCAGCTACCACGAAGACTTGGGATACGGGGAGGC
CATCATGCGCTCCGAGACGCAGGCAATGGACAAGGCGAAAAAGCAGGCCG
TGACCGATGCTCGCAAGCGGGCGCTGCGGCTGTTCGGCGAGGCCCTCGGC
AACTCCATCAACAATAAGGAGAAGATTGAGGCCATCCGTAAGGAGGCGGC
GGGATCGGCGGCGGCGGGCGCGGCACGCCTGTACCATCAGCAGGGCGGCC
GTGGCGGCGGCGGGGGCGGTCGCGGCGGGACCGGAAGCGACGGCCAGGCG
GGGCCACAAGGCAACGTCGCCGTCCCTCGGCACCGGCCGCCGACCGCATT
CGTTCCGGGGCCGCAGCACGCGCCAACCATGCGCGCAGCGCCTGTACCGG
TGGTAGCGGTGGGTGCGGCGGCTGCGCCACCAAAAGCAGCAGTGACGGCG
GTGCCGGCGCCGCCCGCGAAATCGGCGGCCCCAGTGGCGTCGGCCCCCGG
TACTGGGGCCGGGCCAGCTGCGACTTCAAGTGGCACTCCGCCAACGGCAG
CGCCGGAGCAGCAGCCTGCCCAGCTGCAGCAGTCAACTCGGCAGTCGCCG
CCCGTGCTGCAGGTGCAGCAGCAGCAACAGGCGGGGCGGCCTCTGCAGGG
TAGGGAGAACCAGCAGCACCCGCAGCAGCATCAGTACCAGCCATCGCCAC
CGCAGCAGCAGCAACAGCAGCTTGACTTCTCACGCCAGCAACAGCAGCAG
CAGCACCGTCAGTACCACCCGCAGCAGCTACAGCAACCGCAACAGCACCA
TCACCACCAGCAGCAGCGCGCGCCGCCAATCGAGCAGGGGGCTTCCGTGG
CGGGTTACAACTACCAGACCGCCGCCGCCATGTTTGGCCCGGCTGGCCCG
GGCACGCCAGCGAAGGGGACGGCGCAACCGCAGCCGGCATCGTCGATCGG
CCCTGCGTCACCGGCAAGCGGCCAGGACGAATTCGGCTGGCCGGAAGGCC
TCGATTTCCCGACAGAGACAGGAGCGGGTAGCGACGGCAACCCCGCAAAG
CGGCAGCGGCAGTGA
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