mRNA_P-wetherbeei_contig6260.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.600e-24 Identity = 105/230 (45.65%), Postives = 130/230 (56.52%), Query Frame = 1
Query: 1 LRLNTMNKVFPIMARAVNYLARVDRLTTSYPVWVPLAAWDDTVAKMTAPPGGGSLGSTAATAALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLH-VYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNGFLENHFLPERVHIGEPVTAVXXXXXXXXXXXXXXXXXXXXKMLSPEVKEHRRLVTIHHDQVRFRFTDI 687
LR+N + ++FP + A+N LA + S PV VPL A + A TA +L + P+ RA VACSAALT VL E G +Y G+NRWGQCG G DN+ V+ P RVG + +A+G Q + L G V+ WGKG RGQLG G E LPE V + V XXXXXXXXXXXXXXXXXXXX M EVK R V ++HDQ+ R D+
Sbjct: 95 LRINRIQRLFPFVVTAINALASSREVLPS-PVSVPLMA--EPAAASTASTVTAALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGG-EMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGR-VPVYHDQLYPRKVDV 319
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A329RXQ5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329RXQ5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.450e-19 Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
AL+++P G R K+ CS ALT +L ESG L+T G N +GQCG+G + + VY P V G +D+A G QH +A+ GTV+ WGKGERGQLG G
Sbjct: 132 ALLELPEGERVKKIVCSTALTFLLTESGKLFTLGANSYGQCGIGEEGVSVYPPTHVN---IDGDEIVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFG 227
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: W2KYK1_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KYK1_PHYPR) HSP 1 Score: 90.5 bits (223), Expect = 6.400e-18 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
AL+++P G R K+ CS ALT +L ESG L+T G N +GQCG+G + + V P V G +D+A G QH +A+ GTV++WGKGERGQLG G
Sbjct: 132 ALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIGEEGVSVQPPTHVN---IDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG 227
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A2P4X3W3_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3W3_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 8.070e-18 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
AL+++P G R K+ CS ALT +L ESG L+T G N +GQCG+G + + V P V G +D+A G QH +A+ GTV+ WGKGERGQLG G
Sbjct: 27 ALLELPEGERVKKIVCSTALTFLLTESGKLFTLGANSYGQCGVGEEGVSVQPPTHVD---IDGDEIVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFG 122
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A662X8L3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8L3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.870e-18 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 193 VKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
+++P G R K+ CS ALT +L ESG ++T G N +GQCG+G + + V P RV G +D+A G QH VAL A GTV+ WGKGERGQLG G
Sbjct: 123 LELPEGERVKKMVCSTALTFLLTESGKMFTLGANGYGQCGIGAEGVSVVPPTRVD---IDGDEIVDIAAGYQHGVALTADGTVFTWGKGERGQLGFG 216
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A662WND7_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WND7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.100e-17 Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 193 VKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNGFLENHFLPERVHI-GEPVTAVXXXXXXXXXXXXXXXXXXXXKMLSPEVK 627
+++P G R K+ CS ALT +L ESG ++T G N +GQCG+G + + V P RV G +D+A G QH VAL A GTV+ WGKGERGQLG G E + + G+ V +V K+L+P+ K
Sbjct: 354 LELPEGERVKKMVCSTALTFLLTESGKMFTLGANGYGQCGIGAEGVSVVPPTRVN---IDGDEIVDIAAGYQHGVALTADGTVFTWGKGERGQLGFGTGNTDAPQELIALKGKKVASVSAGFNHSCAVTEDGELFVWGKLLNPKGK 496
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.150e-17 Identity = 58/120 (48.33%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNGFLENHFLPERVHI-GEPVTAV 543
A V +P G RA K+ CSAALT VLAESG L+ FG N +GQCG + + P RV G +DVA G QHA+A+ G V+AWGKGERGQLG G E + + G+ V AV
Sbjct: 125 ARVALPEGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGVSEPEPVRV---ALDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAVAAV 241
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A0W8D701_PHYNI (FAS-associated factor 2-B n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D701_PHYNI) HSP 1 Score: 90.5 bits (223), Expect = 2.190e-17 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
AL+++P G R K+ CS ALT +L ESG L+T G N +GQCG+G + + V P V G +D+A G QH +A+ GTV++WGKGERGQLG G
Sbjct: 193 ALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIGEEGVSVQPPTHVN---IDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG 288
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: A0A0P1AMA9_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMA9_PLAHL) HSP 1 Score: 90.1 bits (222), Expect = 2.200e-17 Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNGFLENHFLPERVHI-GEPVTAVXXXXXXXXXXXXXXXXXXXXKMLSPEVK 627
AL+++P G R K+ CS ALT +L ESG L+T G N +GQCG+G + + V P V G +D+A G QH +A+ GTV+ WGKGERGQLG G E + + G+ +T V K+L+P+ K
Sbjct: 129 ALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANSYGQCGIGEEGISVPLPTHVN---IDGDEVIDIAAGYQHGLAVTRNGTVFCWGKGERGQLGFGTGNADAPQELIALRGKKITKVSAGFNHSCAVSEDGELYLWGKLLNPKGK 273
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Match: G4YKE6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKE6_PHYSP) HSP 1 Score: 89.0 bits (219), Expect = 5.660e-17 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 187 ALVKVPAGFRAAKVACSAALTAVLAESGALYTFGFNRWGQCGLGHDNLHVYGPHRVGPPVEHGGVWLDVALGLQHAVALAAGGTVWAWGKGERGQLGNG 483
AL+++P G + K+ CS ALT +L ESG L+T G N +GQCG+G +++ V P V G +D+A G QH +A+ GTV+ WGKGERGQLG G
Sbjct: 129 ALLELPEGEKVKKIVCSTALTFLLTESGKLFTLGANGYGQCGVGEESVSVQPPTHVD---IDGDEIVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFG 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6260.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6260.2.1 >prot_P-wetherbeei_contig6260.2.1 ID=prot_P-wetherbeei_contig6260.2.1|Name=mRNA_P-wetherbeei_contig6260.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MNKVFPIMARAVNYLARVDRLTTSYPVWVPLAAWDDTVAKMTAPPGGGSLback to top mRNA from alignment at P-wetherbeei_contig6260:1891..3396- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6260.2.1 ID=mRNA_P-wetherbeei_contig6260.2.1|Name=mRNA_P-wetherbeei_contig6260.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig6260:1891..3396- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6260:1891..3396- >mRNA_P-wetherbeei_contig6260.2.1 ID=mRNA_P-wetherbeei_contig6260.2.1|Name=mRNA_P-wetherbeei_contig6260.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig6260:1891..3396- (Phaeothamnion wetherbeei SAG_119_79)back to top |