mRNA_P-wetherbeei_contig6256.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6256.4.1
Unique NamemRNA_P-wetherbeei_contig6256.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A7Z9UC28_9BACT (FAD-binding PCMH-type domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UC28_9BACT)

HSP 1 Score: 231 bits (589), Expect = 8.240e-70
Identity = 117/274 (42.70%), Postives = 177/274 (64.60%), Query Frame = 1
Query:    4 LRNLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRAL 825
            +R+L+E+  P+++ +   K+ +Y  SA  IAGGTDIV EPP G+ CLID+  L    I E D  + IGA TTM  +  S   A L  GML  ++C GWP  +R+ ATIGGN+A    FADTPP LLAL A+ ++   +G R +P+ EFF+DYR+TA    IL  + +P  P + +GAF++ A   VDKA+VN  V   +V GRC+++R+A+GA+ R   R+ + E+ +  + L+ E I+ AA  +++ VEP+LD+RA A++RR + + + +RA+
Sbjct:    1 MRHLKELALPQSVDEFWEKKKQYGPSAVVIAGGTDIVSEPPEGVECLIDVRHLTSDSISETDEGITIGAATTMDALTKSPLAARLGCGMLREATCRGWPIPVRSAATIGGNVAGXXXFADTPPVLLALGAQFLIETPEGPRRVPVDEFFIDYRKTAAEGAILMAISVPHKPAEGKGAFVKVAPAAVDKAMVNLGVYSEIVNGRCSNVRVAVGAVTRIPHRVKKVEDLMSGEVLSTELIDEAAETLSQSVEPMLDMRAPAEHRRSLLSAVFKRAV 274          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A535FA07_9CHLR (Xanthine dehydrogenase family protein subunit M n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FA07_9CHLR)

HSP 1 Score: 191 bits (484), Expect = 4.610e-54
Identity = 114/269 (42.38%), Postives = 161/269 (59.85%), Query Frame = 1
Query:   31 PETLQDAVRKRAEYQGSAAPIAGGTDIVPEPP--PGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            P TL +A    AE +G    IAGGTD++  P    G+R ++D  RLGL+YI E +G +HIGA  TM+ VA   Q+ +LANG+L   +       IRN AT+ GN+ASA P ADTPP+L+AL+A+ V+    GER +PL+ FF+   ++     +++E+ +P      RG F +  +T  D ++VNAA  + + EG  T  R+ LGA+     R++ AEE LL+QP   ET +  A +V   V P+ D RASADYRR +S V   RAL Q
Sbjct:   10 PTTLDEAAALLAE-EGRTI-IAGGTDLLVNPRYMVGVREVVDNRRLGLNYIFEEEGWLHIGAGATMRSVARHRQVQALANGILARGAAVCGSPNIRNMATLAGNVASASPSADTPPSLIALNAQVVLVGVQGERSVPLNSFFVGPAKSVRERELIRELRLPLAENDGRGGFYKIGRTAEDISMVNAATTLSIQEGVITKARLVLGAVAPIPLRVIPAEEALLNQPATEETFQRIAEIVRNEVRPISDQRASADYRRRMSGVAAVRALRQ 276          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A1Q3SQM2_9CHLR (FAD-binding PCMH-type domain-containing protein n=1 Tax=Chloroflexi bacterium 54-19 TaxID=1895928 RepID=A0A1Q3SQM2_9CHLR)

HSP 1 Score: 182 bits (463), Expect = 5.840e-51
Identity = 118/282 (41.84%), Postives = 168/282 (59.57%), Query Frame = 1
Query:   10 NLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEP--PPGIRCLIDITRLGLSYIEERDGN-----VHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHL-VEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            N+ + + P ++++AV   A      A IAGGTD++  P    G+  L+DIT LGLSYI   +G+     + +GA TTM E+  S+ LAS+ANG+L  ++       IRN ATIGGN+ SA P  DT   LLALDA+  +  A+G RE+ L +FFL   +T + N ++ E+  P P      AF +  +T+ D ++VNAA  + L  EGR    RIA GA+  T  RI +AE+ LL +   P T+  AA L  E V+P+ D RA+A+YRR+++ V VRRAL Q
Sbjct:    3 NITDYHRPTSVKEAV---ALLTPGRAVIAGGTDLMVNPRYTQGVSELVDITGLGLSYIRLANGSKTRGTIFLGAATTMYEITGSSLLASVANGVLAQAAGTCGSPNIRNVATIGGNICSALPSGDTLTTLLALDARVTLEGANGPREVALVDFFLGPAKTVLQNELVVEIAFPVPELPSGAAFYKLGRTEEDISIVNAAARLRLDPEGRVIEARIAAGAVAPTPLRIFQAEDFLLGKLPEPATLAEAARLALEAVKPITDQRATAEYRRKVTGVCVRRALEQ 281          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A081C6J8_9BACT (Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Candidatus Vecturithrix granuli TaxID=1499967 RepID=A0A081C6J8_9BACT)

HSP 1 Score: 182 bits (461), Expect = 8.940e-51
Identity = 111/276 (40.22%), Postives = 165/276 (59.78%), Query Frame = 1
Query:    4 LRNLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            ++N+ E + P ++ +AV    EY G  A IAGGT+IV E  P +  L+D+  LGL+YI E +  +HIGA TT++++  S  + +LA+G+    +     RQIRN ATIGGN+A     ADT P L+A+DA+ +V   + ER +P+ EFF     T +   ++KE +IP+   Q RG FL+ A+T+ D ++V+   VV +  G C  +RIALGA+  T  RI +AE  L  Q    E IE AA  V   + P+ + RA A +R++IS    +RALS+
Sbjct:    1 MKNVREYFKPTSIPEAVNLLREYPGKGAFIAGGTNIVVEKDPTLDYLVDVNHLGLNYITEDEHLIHIGAGTTIEQLYASRLVNTLASGLFVQVASWFASRQIRNVATIGGNVAEGLSAADTVPPLMAMDAQ-IVLVGEIERTLPIMEFFRKEGLTVLNQELVKEFIIPKEFQQARGKFLKNARTREDISIVSVTTVVLMDGGVCRKVRIALGAVAPTPIRIPQAEALLEGQIPTKELIEQAADTVVAQIAPIDNFRAMAQFRKDISHTYTKRALSE 275          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A2G6KCU0_9BACT (FAD-binding PCMH-type domain-containing protein n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6KCU0_9BACT)

HSP 1 Score: 181 bits (459), Expect = 1.670e-50
Identity = 112/280 (40.00%), Postives = 164/280 (58.57%), Query Frame = 1
Query:    4 LRNLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQRLTL 843
            ++N+ E + P TL +AV    ++ G    IAGGT++V E  P +  LID+ +LGL YI E +  + IGA TT++ +  S    SLA+G+    +     +QIRN ATIGGN+A     ADT PALL +DA+A++   +GER IPL EFF     T +   ++KE ++P+   Q  G FL+ ++T  D ++V+    + +   RC  +RIALGA+     RI EAE  L  Q  + + +E AA +V E + P+ + RASA +R+EIS V   RALS  L L
Sbjct:    1 MKNITEYFIPTTLSEAVNLLQKHPGKGKFIAGGTNLVVEKDPTLNYLIDLHKLGLDYIHEDEQYIRIGACTTIEAIYHSQLANSLASGLFAQIASWFASKQIRNVATIGGNVAEGTSAADTAPALLVMDAQAILF-GEGERTIPLVEFFRPQGGTVLQKELIKEFLLPKDYQQANGKFLKNSKTHEDISIVSVTTTILMDGSRCQKVRIALGAVAPAPIRIPEAEAVLEGQIPSTDLVEQAAEMVVEHIHPIDNFRASAAFRKEISRVYTVRALSDCLKL 279          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A497KEM9_9ARCH (Xanthine dehydrogenase family protein subunit M n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497KEM9_9ARCH)

HSP 1 Score: 180 bits (457), Expect = 4.480e-50
Identity = 103/266 (38.72%), Postives = 157/266 (59.02%), Query Frame = 1
Query:   31 PETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNG-ILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRAL 825
            P+++++      +Y  +A  IAGGTD++ + P   R L+DIT L L YIE  +  +HIGAT T  ++  S  L      M+  ++ +     +RN AT+GGN+ +A P AD P AL+ALD + V++  + ER +PL   F   R+T++ +G  LKE+VIP  P     +F +  +T++D AL+N A  + L +G     RI LGA+  T  R  EAE+ L D+ + PE +E  A   AE   P+ D+R+SA+YRRE++ VL RRA+
Sbjct:   13 PKSIKETTNALMKYGKAAKIIAGGTDLLVDKPEETRVLVDITGLNLGYIEGTEQGLHIGATATFNKIHDSPFLIQQPYRMIAEAAWEVGHYNLRNIATVGGNICNAVPSADAPVALIALDTEVVISGPEVERNVPLLRLFRYVRETSLNSGEFLKELVIPPQPRNTGASFQKIGRTKIDIALINVACRLSLKKGAVHDSRIVLGAVAPTPLRAYEAEKGLKDEKVTPEIVEKVAGFAAEATRPIDDVRSSAEYRREMTRVLTRRAI 278          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A536GQ59_9CHLR (Xanthine dehydrogenase family protein subunit M n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536GQ59_9CHLR)

HSP 1 Score: 180 bits (457), Expect = 4.610e-50
Identity = 113/277 (40.79%), Postives = 163/277 (58.84%), Query Frame = 1
Query:   10 NLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPP--PGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPT-QRRGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            N+   + P+T+ +AV   AE   +   IAGGTD++  P    G+R ++DI  LGL YI   +G + +GA TTM+ VA   ++ +LA+G+L   +       IRN AT+ GN+ASA P ADTPP+LLAL+A  V+    GER +PL +FF+   ++     +++E+ IP   T  + G F +  +T  D ++VNAA ++ L +GR    R+ +GA+     R+V AEE L  QP   ET E    +V E V P+ D RASADYRR +S V V RAL Q
Sbjct:    3 NITAYHSPDTISEAVMLLAEEDCTV--IAGGTDLLVNPRYMVGVREVVDIRGLGLDYIHIENGWLSVGAGTTMRTVALHPEIQALADGILARGAAVCGSPNIRNMATLAGNVASALPSADTPPSLLALEAHVVLVGRKGERIVPLEQFFVGPGKSVRKRELIRELRIPVANTASKHGGFYKIGRTAEDISIVNAAAMLVLDKGRVVDARLIMGAVAPVPLRVVRAEEALKGQPATEETFERVGAIVREEVRPISDHRASADYRRRMSGVAVIRALRQ 277          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A352Y304_9CHLR (Xanthine dehydrogenase family protein subunit M n=3 Tax=Ktedonobacter sp. TaxID=1932716 RepID=A0A352Y304_9CHLR)

HSP 1 Score: 180 bits (456), Expect = 6.470e-50
Identity = 114/270 (42.22%), Postives = 160/270 (59.26%), Query Frame = 1
Query:   31 PETLQDAVRKRAEYQGSAAPIAGGTDIVPEPP--PGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQR-RGAFLRFAQTQVDKALVNAAVVVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            P TL +A    AE  G  A IAGGTD++  P    G+R ++DI RLGL+YI   +G ++IGA  TM+ VA   +L  LANG+L   +       IRN AT+ GN+ASA P ADTPPALLALDA+ V+    GER +PL  FF+   ++     +++E+ IP   +   RG F +  +T  D ++VNAA  + + +G+ +  R+ LGA+     R+  AEE L+ Q    ET +  A +V + V P+ D RA+A+YRR ISAV   RAL Q
Sbjct:   10 PTTLIEAAALLAE-DGRTA-IAGGTDLLVNPRYMVGVREVVDIRRLGLNYIRVENGWLYIGAGATMRTVAQRVELQGLANGILARGAAVCGSPNIRNMATLAGNIASALPSADTPPALLALDAEVVLVGMRGERVVPLDSFFVGPAKSVRERDLIRELRIPLAGSNALRGGFYKIGRTAEDISMVNAAATLKIQDGKISMARLVLGAVAPVPLRVSRAEEALVGQAATEETFQRVAEIVRDEVRPITDHRATAEYRRRISAVATVRALRQ 277          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: A0A2N9N058_9BACT (Putative 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha n=1 Tax=Candidatus Sulfopaludibacter sp. SbA3 TaxID=2043164 RepID=A0A2N9N058_9BACT)

HSP 1 Score: 178 bits (452), Expect = 2.310e-49
Identity = 116/280 (41.43%), Postives = 163/280 (58.21%), Query Frame = 1
Query:    1 MLRNLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNGILKEVVIPRPPTQRR--GAFLRFAQTQVDKALVNAAVVVHL-VEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQ 831
            M   +E  Y P  +++A++     +GSA  +AG TD++ E    +R LIDIT  GL+YI  ++ N  IGATTTM E+ T   L  LA G+L  ++      QIRN AT+GGN+A+  P AD    L+ALDA AVVA+    R+I ++++ L  R   + N +L EV    PP+  R   +FL+F +T VD +LVN A  + L   GR    RIALGA+  T  R+ +AE  +  + L+   I  A+  V   V P+ D+RASADYRRE+S VL  RAL +
Sbjct:    1 MFERVEAFYRPANVREALQLLQRGKGSARIVAGCTDVIVERDRSVRFLIDITHAGLTYIRRKNTNWAIGATTTMAEIXTPG-LLGLAGGILSRAAATCGSPQIRNMATVGGNMANGSPAADLATPLVALDAAAVVADGHWRRKILVADYMLVARCPELANSLLVEVTFDAPPSGSRCGWSFLKFGRTAVDISLVNVAAGLQLDARGRVKWARIALGAVAITPIRVPDAEGLMAGRVLDHALIAEASESVMRAVHPINDVRASADYRRELSRVLTGRALEE 279          
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Match: X0SHR7_9ZZZZ (FAD-binding PCMH-type domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0SHR7_9ZZZZ)

HSP 1 Score: 176 bits (445), Expect = 2.350e-48
Identity = 110/271 (40.59%), Postives = 160/271 (59.04%), Query Frame = 1
Query:   31 PETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLIDITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWPRQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFFLDYRQTAVGNG-ILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAV-VVHLVEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMVEPVLDLRASADYRREISAVLVRRALSQRL 837
            P TL++A+    ++ GSA  +AGGTD++ E P G+ CLID++ L L YI E    + IGA TT++ +  S  L      +   S+  G  R +RN ATIGGNL S+ P AD    L+ LD+ A +A   GER +PL EFF+  R+ A+    +L EV +P  PT+   AF +  +T VD ALVN AV +    +G C  +RIALG++  T  R   AE  L ++ L+   I+ AA  V+E + P+ D+R+SA+YRR+ S VL +R + + L
Sbjct:    9 PRTLEEALSLLGDHGGSAKILAGGTDLLVEKPGGVECLIDVSSLPLDYIREEGKGLRIGALTTIESINGSDILTGPFQVLTEASNLFGH-RNVRNLATIGGNLCSSVPSADMAAPLMVLDSSAHIASLRGERTVPLEEFFVFVRENALEEDEMLIEVQVPPQPTRIGTAFEKIGRTSVDIALVNVAVRLTRGEDGICRDIRIALGSVAPTPMRCPRAEGLLREKELDEALIDEAAQAVSEEIRPISDVRSSAEYRRDASRVLAKRCILRAL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6256.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9UC28_9BACT8.240e-7042.70FAD-binding PCMH-type domain-containing protein n=... [more]
A0A535FA07_9CHLR4.610e-5442.38Xanthine dehydrogenase family protein subunit M n=... [more]
A0A1Q3SQM2_9CHLR5.840e-5141.84FAD-binding PCMH-type domain-containing protein n=... [more]
A0A081C6J8_9BACT8.940e-5140.22Molybdopterin dehydrogenase FAD-binding protein n=... [more]
A0A2G6KCU0_9BACT1.670e-5040.00FAD-binding PCMH-type domain-containing protein n=... [more]
A0A497KEM9_9ARCH4.480e-5038.72Xanthine dehydrogenase family protein subunit M n=... [more]
A0A536GQ59_9CHLR4.610e-5040.79Xanthine dehydrogenase family protein subunit M n=... [more]
A0A352Y304_9CHLR6.470e-5042.22Xanthine dehydrogenase family protein subunit M n=... [more]
A0A2N9N058_9BACT2.310e-4941.43Putative 6-hydroxypseudooxynicotine dehydrogenase ... [more]
X0SHR7_9ZZZZ2.350e-4840.59FAD-binding PCMH-type domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6256contigP-wetherbeei_contig6256:1705..3045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1499967.BAYZ01000154_gene1445
PFAMsCO_deh_flav_C,FAD_binding_5
Model size1281
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.47e-51
EggNOG OGsCOG1319@1|root,COG1319@2|Bacteria
Descriptionxanthine dehydrogenase activity
Cds size1281
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186900.3181248-CDS-P-wetherbeei_contig6256:1704..25351683186900.3181248-CDS-P-wetherbeei_contig6256:1704..2535Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6256 1705..2535 +
1683186900.3334374-CDS-P-wetherbeei_contig6256:2595..30451683186900.3334374-CDS-P-wetherbeei_contig6256:2595..3045Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6256 2596..3045 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6256.4.1prot_P-wetherbeei_contig6256.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6256 1705..3045 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6256.4.1

>prot_P-wetherbeei_contig6256.4.1 ID=prot_P-wetherbeei_contig6256.4.1|Name=mRNA_P-wetherbeei_contig6256.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=427bp
MLRNLEEVYYPETLQDAVRKRAEYQGSAAPIAGGTDIVPEPPPGIRCLID
ITRLGLSYIEERDGNVHIGATTTMQEVATSAQLASLANGMLCTSSCDGWP
RQIRNTATIGGNLASAGPFADTPPALLALDAKAVVAEADGEREIPLSEFF
LDYRQTAVGNGILKEVVIPRPPTQRRGAFLRFAQTQVDKALVNAAVVVHL
VEGRCTHLRIALGAMGRTCRRIVEAEERLLDQPLNPETIEAAATLVAEMV
EPVLDLRASADYRREISAVLVRRALSQRLTLRRFHVLIDITINGQAHQLD
IHPGTLLLDLLRESGLQSMRDSDEALVDGKRIQTGIYLAAQAHKRNVLTV
EGLSIHNPVQAAILETCSAFTSPMLLAAYELLSATPNPTEADAQDALGGT
CAEVARVLQAAQRIREGRGALSLTAT*
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mRNA from alignment at P-wetherbeei_contig6256:1705..3045+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6256.4.1 ID=mRNA_P-wetherbeei_contig6256.4.1|Name=mRNA_P-wetherbeei_contig6256.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig6256:1705..3045+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGAAACCTTGAGGAAGTCTACTACCCTGAAACGCTCCAGGACGC TGTCCGCAAGCGCGCCGAATACCAGGGTTCCGCCGCCCCCATCGCGGGCG GCACAGACATCGTGCCCGAACCCCCTCCGGGAATTCGCTGCCTCATCGAT ATCACTCGCCTGGGCCTGAGCTACATCGAGGAACGCGACGGCAACGTCCA CATCGGTGCCACCACGACCATGCAAGAAGTGGCGACCTCGGCCCAGCTAG CCAGCCTGGCGAACGGAATGTTGTGTACCTCCAGTTGCGACGGCTGGCCC CGCCAGATCCGCAATACCGCCACCATCGGCGGTAACCTGGCCAGTGCTGG CCCCTTTGCCGACACACCGCCCGCCTTGCTCGCCCTCGACGCCAAAGCGG TCGTCGCCGAAGCGGACGGCGAGCGCGAAATCCCGCTTAGCGAGTTCTTT CTTGACTACCGCCAGACCGCAGTAGGCAACGGGATCCTCAAAGAAGTGGT CATTCCGCGCCCTCCCACCCAGCGGCGTGGGGCCTTCCTACGCTTCGCGC AAACCCAGGTGGACAAAGCTCTCGTCAACGCCGCCGTCGTCGTTCACCTG GTCGAAGGGCGCTGCACCCATCTGCGCATCGCCCTCGGCGCCATGGGACG AACCTGTCGGCGCATCGTCGAGGCCGAAGAACGCCTCCTGGATCAGCCGC TCAATCCCGAGACCATCGAGGCCGCAGCCACCCTCGTCGCCGAGATGGTC GAGCCCGTTCTCGATCTGCGGGCCAGCGCCGATTACCGTCGCGAAATCTC CGCAGTCCTTGTCCGGCGGGCTCTCTCGCAGGTGGCTCGCGCCAGCTGAA GCGAAGTTTGCCCGTCTCCTCTCGCGGGAATAATCCCCAAGCGACTTACG CTGAGGAGATTTCACGTGCTCATTGACATCACCATCAACGGCCAGGCTCA CCAGTTGGACATCCATCCCGGCACTCTGCTGCTCGATCTTCTCCGCGAGA GCGGATTGCAAAGCATGCGCGATTCCGACGAGGCGCTCGTCGATGGCAAA CGGATCCAGACCGGCATCTATCTTGCCGCCCAGGCCCACAAGCGCAACGT TCTGACCGTCGAGGGGCTGAGCATCCATAACCCCGTTCAGGCCGCAATCC TGGAAACGTGCTCAGCTTTCACTTCCCCAATGCTCCTGGCCGCCTACGAG TTGCTCTCCGCCACGCCAAATCCCACGGAGGCCGACGCCCAGGACGCTCT TGGCGGGACGTGCGCCGAAGTCGCCAGGGTGCTGCAGGCCGCTCAGCGTA TCCGCGAAGGCCGCGGCGCGCTCAGTCTTACTGCCACTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6256:1705..3045+

>mRNA_P-wetherbeei_contig6256.4.1 ID=mRNA_P-wetherbeei_contig6256.4.1|Name=mRNA_P-wetherbeei_contig6256.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig6256:1705..3045+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGAAACCTTGAGGAAGTCTACTACCCTGAAACGCTCCAGGACGC
TGTCCGCAAGCGCGCCGAATACCAGGGTTCCGCCGCCCCCATCGCGGGCG
GCACAGACATCGTGCCCGAACCCCCTCCGGGAATTCGCTGCCTCATCGAT
ATCACTCGCCTGGGCCTGAGCTACATCGAGGAACGCGACGGCAACGTCCA
CATCGGTGCCACCACGACCATGCAAGAAGTGGCGACCTCGGCCCAGCTAG
CCAGCCTGGCGAACGGAATGTTGTGTACCTCCAGTTGCGACGGCTGGCCC
CGCCAGATCCGCAATACCGCCACCATCGGCGGTAACCTGGCCAGTGCTGG
CCCCTTTGCCGACACACCGCCCGCCTTGCTCGCCCTCGACGCCAAAGCGG
TCGTCGCCGAAGCGGACGGCGAGCGCGAAATCCCGCTTAGCGAGTTCTTT
CTTGACTACCGCCAGACCGCAGTAGGCAACGGGATCCTCAAAGAAGTGGT
CATTCCGCGCCCTCCCACCCAGCGGCGTGGGGCCTTCCTACGCTTCGCGC
AAACCCAGGTGGACAAAGCTCTCGTCAACGCCGCCGTCGTCGTTCACCTG
GTCGAAGGGCGCTGCACCCATCTGCGCATCGCCCTCGGCGCCATGGGACG
AACCTGTCGGCGCATCGTCGAGGCCGAAGAACGCCTCCTGGATCAGCCGC
TCAATCCCGAGACCATCGAGGCCGCAGCCACCCTCGTCGCCGAGATGGTC
GAGCCCGTTCTCGATCTGCGGGCCAGCGCCGATTACCGTCGCGAAATCTC
CGCAGTCCTTGTCCGGCGGGCTCTCTCGCAGCGACTTACGCTGAGGAGAT
TTCACGTGCTCATTGACATCACCATCAACGGCCAGGCTCACCAGTTGGAC
ATCCATCCCGGCACTCTGCTGCTCGATCTTCTCCGCGAGAGCGGATTGCA
AAGCATGCGCGATTCCGACGAGGCGCTCGTCGATGGCAAACGGATCCAGA
CCGGCATCTATCTTGCCGCCCAGGCCCACAAGCGCAACGTTCTGACCGTC
GAGGGGCTGAGCATCCATAACCCCGTTCAGGCCGCAATCCTGGAAACGTG
CTCAGCTTTCACTTCCCCAATGCTCCTGGCCGCCTACGAGTTGCTCTCCG
CCACGCCAAATCCCACGGAGGCCGACGCCCAGGACGCTCTTGGCGGGACG
TGCGCCGAAGTCGCCAGGGTGCTGCAGGCCGCTCAGCGTATCCGCGAAGG
CCGCGGCGCGCTCAGTCTTACTGCCACTTAA
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