mRNA_P-wetherbeei_contig6252.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A485LI01_9STRA (Aste57867_19783 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI01_9STRA) HSP 1 Score: 106 bits (265), Expect = 6.610e-21 Identity = 58/117 (49.57%), Postives = 71/117 (60.68%), Query Frame = 3
Query: 351 LLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPLVAGKA 698
LL G+FTH +L NY+V +PWL C RL R V V +VHG P S+ N+ PPLP PYGTHH+KM +L T +RV + TANFV GDW K++G W QDFP V A
Sbjct: 52 LLDGDFTHAILTNYKVDVPWLFAQCARLAR--VPVLLVHGSH-PSSIQDACKAYTNVTPIAPPLPIPYGTHHTKMMILFHPTFVRVAIFTANFVAGDWNYKTQGLWTQDFPAVIATA 165
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: T0REF6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0REF6_SAPDV) HSP 1 Score: 104 bits (260), Expect = 2.350e-20 Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 3
Query: 345 RQLLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPL 683
R LL+G FTH +L NY+V +PWLL P+L V V + HG Q ++ N+R+ PPLP PYGTHH+KM +L + +RV + TANFV DW K++G W+QDFPL
Sbjct: 38 RDLLAGAFTHAILTNYKVDVPWLLEQSPQLT--SVPVLLCHGSDQT-TMRAACAACANIRVLAPPLPIPYGTHHTKMMVLFYAASVRVAIFTANFVASDWDAKTQGVWYQDFPL 148
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A024GDK2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDK2_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.430e-19 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 3
Query: 336 LAARQLLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPLV 686
+A + LL G FT LL NY ++PWL+ C RL++ V V +VHG+R L N++ P LP P+GTHHSKM ++L+ +RV + TANF+P DW K++G W+QDF L+
Sbjct: 26 IALKDLLKGEFTSCLLSNYMYNVPWLMQQCTRLQQ--VPVILVHGERDQQRLNQDCQKYTNIKAVAPYLPIPFGTHHSKMMIILYADKVRVAIFTANFLPIDWSNKTQGIWYQDFGLL 141
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: K3WH37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH37_GLOUD) HSP 1 Score: 99.4 bits (246), Expect = 2.020e-18 Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 3
Query: 351 LLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPL 683
LL+G FT VLL NY +PWL CPRL DV V +VHG+R ++ N+ L P LP PYGTHH+KM ++++ T +RV + TANF+ DW K++G W+QDF L
Sbjct: 69 LLAGEFTKVLLTNYMFDMPWLFGECPRLH--DVPVLLVHGERDRLAMANECKGYTNVSLVAPYLPIPYGTHHTKMMVVVYPTKVRVAIFTANFIAIDWNNKTQGVWFQDFEL 178
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 99.0 bits (245), Expect = 2.830e-18 Identity = 57/123 (46.34%), Postives = 74/123 (60.16%), Query Frame = 3
Query: 345 RQLLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPLVA-GKADGS 707
++L G +T LL NY LPWL CPRL DV V +VHG+R ++ N+ P LP PYGTHH+KMA+LL+ T RV + TANF+ DW K++G W+QDF L A G+ D S
Sbjct: 72 QELFEGEYTQCLLTNYMYDLPWLFASCPRLH--DVPVVLVHGERDRHAMTQECKGYGNVTPVAPYLPIPYGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKALGEDDAS 192
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A1V9Y5P7_9STRA (Tyrosyl-DNA phosphodiesterase 1-like isoform X1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5P7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.880e-18 Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 3
Query: 348 QLLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFP 680
++L+G+F+H +L NY V + WLL +L + V V + HG Q S+ P N+ PPLP PYGTHH+KMA+L T +RV V TANF+ GDW K++G W+QDFP
Sbjct: 42 EVLAGDFSHAILTNYHVDVAWLLAQSKQLTK--VPVLLCHGSNQS-SIRDACAPYANVTALAPPLPIPYGTHHTKMAVLFHATFVRVAVFTANFLAGDWATKTQGLWFQDFP 150
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 99.4 bits (246), Expect = 5.900e-18 Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 3
Query: 261 PTRIPARHCPIFFLSSRL--SPSSFLVLAA--RQLLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPLV 686
P+ P P+ F +RL +P++ + A LLSG F+ VLL NY L WL + CPRL DV V +VHG+R ++ N+ P LP YGTHH+KM ++++ T +RV + TANF+P DW K++G W+QDF L
Sbjct: 477 PSEAPRALAPLGFHLTRLQNAPAAHNLYAVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLA--DVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELA 621
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: W4H376_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H376_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.690e-18 Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 3
Query: 351 LLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDF 677
LL G FTH +L NY+V +PWL CPRL + V V +VHG Q S+ + + PPLP PYGTHH+KM + T +RV + TANFV DW K++G W QDF
Sbjct: 46 LLDGEFTHAILTNYKVDVPWLFGQCPRLAQ--VPVILVHGGHQE-SMQAACRQYKQVTVVAPPLPIPYGTHHTKMLIAFHSTFVRVAIFTANFVRNDWECKTQGLWTQDF 152
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A6G0X136_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X136_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.130e-16 Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 3
Query: 351 LLSGNFTHVLLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLP-PYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFP 680
LL G FT +L NY+V + WL RL+ V + VHG P S+ N+ + PPLP PYGTHH+KM +L F+T +RV + TANFV GDW K++G W Q+FP
Sbjct: 40 LLDGAFTEAILTNYKVDVDWLFAQSARLQVAPVLL--VHGS-SPASMSEACRQFKNVTVIAPPLPIPYGTHHTKMMILFFDTFVRVAIFTANFVAGDWESKTQGVWMQEFP 147
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Match: A0A835Z5B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.320e-16 Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 3
Query: 378 LLMNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKPPLPPYGTHHSKMALLLFETGIRVCVVTANFVPGDWLLKSEGCWWQDFPLV-AGKA 698
+L NY + W++ CPRL V V +L P++ L+ LPPYGTHHSKM +L FETG+RV V TANF DW KSEG WWQ+FPLV AG A
Sbjct: 48 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSA 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6252.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6252.1.1 >prot_P-wetherbeei_contig6252.1.1 ID=prot_P-wetherbeei_contig6252.1.1|Name=mRNA_P-wetherbeei_contig6252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp MNYEVHLPWLLHVCPRLRRPDVRVDVVHGQRQPPSLPPGEPPLPNLRLYKback to top mRNA from alignment at P-wetherbeei_contig6252:1468..3463+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6252.1.1 ID=mRNA_P-wetherbeei_contig6252.1.1|Name=mRNA_P-wetherbeei_contig6252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1996bp|location=Sequence derived from alignment at P-wetherbeei_contig6252:1468..3463+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6252:1468..3463+ >mRNA_P-wetherbeei_contig6252.1.1 ID=mRNA_P-wetherbeei_contig6252.1.1|Name=mRNA_P-wetherbeei_contig6252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig6252:1468..3463+ (Phaeothamnion wetherbeei SAG_119_79)back to top |