mRNA_P-wetherbeei_contig6233.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: D8LK44_ECTSI (ABC transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK44_ECTSI) HSP 1 Score: 284 bits (727), Expect = 8.270e-89 Identity = 146/253 (57.71%), Postives = 184/253 (72.73%), Query Frame = 1
Query: 256 QAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLS 1014
+A TMDRM+ S+ + + LP SR +++RVL+M+++ G+SLA L+R G A R RIGK LL L+DAWG+MIF E L +ADPHPGNILIMPE + P+ GLLGLR P+LR+GLLDWGQTKEL R + A+L+LA+S + F LGVKL +P+D DSI KLA VMFDTR + GL+FNPFS NVLKLN++ +YPQDLYF+LRTVLMFRGMAQSLGV+FSLA +WAP AR +L+
Sbjct: 251 EATTMDRMHESLGE---HSRRINLPTSRSSTKRVLIMSYLEGESLAQLKRGGKERFNAARKRIGKSLLHELADAWGFMIFEEGLFNADPHPGNILIMPE---EQVGPIKRGFGLLGLRTPKLRIGLLDWGQTKELGRQDREKVANLILAVSSHASPDIVRCFNGLGVKLSNPDDADSIEKLALVMFDTRTIKGLDFNPFSDNNVLKLNSVLEYPQDLYFILRTVLMFRGMAQSLGVEFSLADKWAPHARRLLA 497
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A835Z9N8_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N8_9STRA) HSP 1 Score: 280 bits (717), Expect = 2.330e-87 Identity = 153/250 (61.20%), Postives = 183/250 (73.20%), Query Frame = 1
Query: 256 QAATMDRMYASMTQCQPADGTLV-LPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSD-TDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLA 999
+A MDRM S+ Q +G L+ +P S +A++R+LVM+FV GQSLAS++R +LR RIG RLL L+DAWGYMIF E L +AD HPGNI+IMPEGR +VL GLLGL P+LRVGLLDWGQ KELDVDSR RFA LV+A+SD + AF LG+ LE+P+D DSI KLA VMFDT+ + GLNFNPFS NVLKLN+++QYPQDLYFVLR LMFRGMAQSL V+FSLA W P A
Sbjct: 232 EARVMDRMRLSL-QNHVREGELITVPSSIMATKRLLVMSFVEGQSLASIKRGEHERFSSLRRRIGARLLQTLADAWGYMIFGEGLFNADLHPGNIVIMPEGRAWGLTGLVL--GLLGLNTPKLRVGLLDWGQVKELDVDSRTRFARLVIAISDGKGREEIVEAFKGLGIVLENPDDSDSIEKLALVMFDTKPIAGLNFNPFSEGNVLKLNSVKQYPQDLYFVLRAALMFRGMAQSLKVEFSLADIWEPHA 478
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: H6WB89_VAULI (ABC transporter-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB89_VAULI) HSP 1 Score: 260 bits (665), Expect = 4.260e-78 Identity = 139/253 (54.94%), Postives = 173/253 (68.38%), Query Frame = 1
Query: 256 QAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDT-DENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAML 1011
+++ M+RM S+ + +P S A+++VL+M+F+ GQSLAS+RRS + LR RIG RLL L+ AWGYMIF E L +AD HPGNI+IMPEGR PV L LGL+GL P L VGLLDWGQ KELD SR RFA LV A+++ ++ V AF LG+K+ DPN+ DSI KLA VMFD R + G N NPFS N++K N I+QYPQDLYFVLR +MFRGM++SL V FSLA WAP A L
Sbjct: 385 ESSVMERMKLSLAN---HSNIVSVPTSINATKKVLIMSFIEGQSLASIRRSEKERFRNLRKRIGGRLLKTLAGAWGYMIFQEGLFNADLHPGNIVIMPEGRAW--GPVGLVLGLVGLNTPALSVGLLDWGQVKELDEGSRERFARLVCAIANKKSQDEVVEAFKGLGIKIADPNNSDSIEKLALVMFDARNIDGANLNPFSQDNIMKQNRIKQYPQDLYFVLRAAIMFRGMSESLKVPFSLANAWAPYATKFL 632
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S4D6K6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6K6_HETAK) HSP 1 Score: 182 bits (462), Expect = 1.250e-50 Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 1
Query: 253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASL-------RRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENA-VAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSELG 1023
R+A MD + AS+ + L +P SRL +RR+LVM FV G L L RRS + R R G+ LL+ L+ A+G+M+F + +ADPHPGN+L+ G L VGLLDWGQTKEL ++ R AHLV ALS + + F +G+KLE+PND S + +A MFDTR++PG NPF ++N L+ NA++ +P DL+F+LR++ + +G++ L VDF L++ WAP A L+ G
Sbjct: 116 REARNMDLIGASLREA--FGQKLTVPQSRLVTRRMLVMDFVVGSPLPQLEAVFSSSRRSRGFLRRRARRRAGEALLARLAHAYGHMVFRCGVFNADPHPGNLLLRRAGPASGG----------------LAVGLLDWGQTKELGEEATARLAHLVKALSQKENKEDIVQRFYDMGMKLENPNDTTSAHAIAVTMFDTRRIPGFVTNPFDSRNALRSNAVKVFPPDLFFMLRSIQIIKGISHGLDVDFHLSRIWAPYADQYLASHG 362
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A836CNM3_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNM3_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.800e-49 Identity = 98/245 (40.00%), Postives = 145/245 (59.18%), Query Frame = 1
Query: 253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRW 987
++A +DRM+AS+ P+ +VLP + LASRRVLVMTFV G L + + GK++L+ L++AWG+M+F E +ADPHPGN+L+M + +++GLLDWGQ K +D + + A L+ A D + +A F+ LGVK+ +P D S+ +LA MF++R V G+ F+PFS N L N + +P +L+FVLR+V M RG+A +GVDFS+AQ W
Sbjct: 203 KEANNIDRMHASLASAVPS---VVLPETVLASRRVLVMTFVEGLPFTKLVVPTGFSRRLFASK-GKKMLNTLAEAWGHMLFVEGCFNADPHPGNMLLMRD----------------------MKIGLLDWGQVKSVDRALQVQLARLMRAFLADDPHQIAQEFLGLGVKVSNPEDSTSLRQLALSMFESRDVKGMVFSPFSPDNALASNQVTAFPPELFFVLRSVQMLRGLAHGMGVDFSVAQAW 421
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S4DCV0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCV0_HETAK) HSP 1 Score: 171 bits (434), Expect = 5.990e-45 Identity = 104/273 (38.10%), Postives = 156/273 (57.14%), Query Frame = 1
Query: 253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGAR------------DHKALRV--RIGK----RLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLN-FNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLS 1014
R+A MDR+ +M + + + +P S A ++L+M+F+ G L+ A D + RV R+GK R+L++L+ AWGYMIF E L + DPHPGN+L+MP GR R+GLLDWGQTK ++ + + A +LA+ + V F ALG ++++P D SI K+ R MFDTR++ G + NPF+ ++LKLN + Q P+D+YFVLR + MFRG++ +GV FSLA+ WAP AR +++
Sbjct: 303 REAGAMDRICLAMQKARMRK--IAVPKSVFAKPQLLIMSFLEGVPLSRFADEHALMGDTPEGLAASLDPRRPRVSGRVGKVVAARMLNILAKAWGYMIFKEGLFNGDPHPGNLLLMP-GR---------------------RIGLLDWGQTKVIEPGLQYKIAQTILAMRGGADAEVVRWFFALGFEVQNPGDHASIVKMVRGMFDTREILGKDDLNPFAEASLLKLNPVTQIPEDIYFVLRAIQMFRGLSTKVGVRFSLAEAWAPYAREVVA 551
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A0G4F3L2_VITBC (Protein kinase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F3L2_VITBC) HSP 1 Score: 172 bits (437), Expect = 6.230e-45 Identity = 93/239 (38.91%), Postives = 138/239 (57.74%), Query Frame = 1
Query: 325 LPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALR-------VRIGKRLLSLLSDAWGYMIFTE-ALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSE 1017
+P RLA++++L+M+F+ G + LR ++ A+R R+ +R+ ++DAWG MIF++ L HADPHPGN LIMP G +GLLDWGQ K LD +RR A VL L + +A + LG+ +EDP++ ++ ++A MFDTR++PG+ FN FS LK NA+ +PQDL+FVLR+ + RG++ L +D +L RWAP A+ L E
Sbjct: 313 VPQPRLATKKLLIMSFLDGVQITRLREVAESNNNAVRRLSPRMQQRLLRRITMRIADAWGVMIFSQDGLHHADPHPGNFLIMPRGH----------------------LGLLDWGQVKALDQPLQRRLASFVLDLKSRQRDRIAQGLLDLGIHVEDPSNNATLERMAVSMFDTRKMPGVCFNIFSPDYTLKSNAVLGFPQDLFFVLRSCQLLRGLSTGLSIDLALCDRWAPHAKRFLRE 529
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A1Y1HSN1_KLENI (Protein kinase superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSN1_KLENI) HSP 1 Score: 161 bits (408), Expect = 4.750e-41 Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 1
Query: 340 LASRRVLVMTFVTGQSLASL----RRSGARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGL-NFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGVDFSLAQRWAPLARAMLSELGEGEG 1035
L +R+VLVM F+ G + L ++ + R +R+L L+ A+G+MI + ADPHPGNI++ G+ VGLLD+GQTK L R ++A LVLAL++ DE A+ AF ALG++ E P DV S + +A +MFDTR + NPF+ ++ ++ N + ++P+DL+FVLRTV + RG+ +G+D+S+A+ W PLA +L+ELGE G
Sbjct: 372 LVTRQVLVMDFLDGVQITRLQDEMKKRRINPDGLVARRAKRRILEDLTAAYGHMILRDGFFQADPHPGNIIVCKGGK----------------------VGLLDYGQTKRLPERLRLQYARLVLALNERDELAITDAFRALGIRTEKPPDVHSFSNMAGLMFDTRMPKDRESLNPFTDESEIQKNPVTEFPKDLFFVLRTVQLLRGLTMGMGIDWSVAEAWKPLADEVLAELGEPSG 586
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A482RSK2_9ARCH (AarF/ABC1/UbiB kinase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSK2_9ARCH) HSP 1 Score: 157 bits (398), Expect = 2.410e-40 Identity = 89/258 (34.50%), Postives = 137/258 (53.10%), Query Frame = 1
Query: 253 RQAATMDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARDHKALRVR--IGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGV-DFSLAQRWAPLARAMLSE 1017
R+A MD M++S+ + +V+P S +R++LVM+F+ G +L + V+ IGKR+L+++S+AWG IF L H DPHPGNI I + + +GLLDWGQ K L R++A L++AL D+ + AF L VK+ P D+ ++ +A MFDTR NPF Q +K N++ P ++YF++R V + RGM + + D+SLA +W AR +L+E
Sbjct: 269 REAFNMDFMFSSLAHIKG----IVIPQSIFRTRKLLVMSFIEGDNLTKVAHKDVLHAMPTLVKRTIGKRILNVMSEAWGDQIFCLRLFHGDPHPGNICITRDSQ----------------------IGLLDWGQVKSLSSQIARQYAQLIVALHSRDQQQIVQAFFDLEVKVSKPYDLRTVEAIAVTMFDTRTHENFVMNPFDPQAAIKQNSVLSMPTEIYFIVRAVQLMRGMCSAFKLQDYSLADKWVVHARRVLAE 500
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Match: A0A7S2TJT0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJT0_9EUKA) HSP 1 Score: 142 bits (359), Expect = 2.040e-36 Identity = 72/194 (37.11%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 412 ARDHKALRVRIGKRLLSLLSDAWGYMIFTEALLHADPHPGNILIMPEGRGDTRNPVVLALGLLGLRAPRLRVGLLDWGQTKELDVDSRRRFAHLVLALSDTDENAVAAAFVALGVKLEDPNDVDSINKLARVMFDTRQVPGLNFNPFSAQNVLKLNAIRQYPQDLYFVLRTVLMFRGMAQSLGV-DFSLAQRWA 990
A++ + R+ G +++ +++ WG M+ + HADPHPGNI+++P+ + P V + ++G+LDWGQ KE+D +R + + +LS ++ A+ AF+ LG+K+E+ D+DSI +AR MFDT+ G N F A L NA++ P+D++F+LRT+ + RG+ LGV DFSLA WA
Sbjct: 86 AQNPRTRRI-FGGKIVKRMTEIWGRMVMEDGFFHADPHPGNIMLLPKTSRFSWLPFVP-------KTTGFKLGILDWGQVKEIDESFKRNMSDVFHSLSTQNQEAIKKAFLNLGIKVENETDLDSITTIARTMFDTKAYEGDCNNIFDADCALNKNAVKTMPRDIFFILRTIQIIRGLGFRLGVEDFSLASEWA 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6233.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6233.1.1 >prot_P-wetherbeei_contig6233.1.1 ID=prot_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MDRMYASMTQCQPADGTLVLPHSRLASRRVLVMTFVTGQSLASLRRSGARback to top mRNA from alignment at P-wetherbeei_contig6233:2..1526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6233.1.1 ID=mRNA_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1525bp|location=Sequence derived from alignment at P-wetherbeei_contig6233:2..1526+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6233:2..1526+ >mRNA_P-wetherbeei_contig6233.1.1 ID=mRNA_P-wetherbeei_contig6233.1.1|Name=mRNA_P-wetherbeei_contig6233.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig6233:2..1526+ (Phaeothamnion wetherbeei SAG_119_79)back to top |