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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2181 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2181 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186898.5063422-CDS-P-wetherbeei_contig6225:206..248 | 1683186898.5063422-CDS-P-wetherbeei_contig6225:206..248 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6225 207..248 + |
| 1683186898.515272-CDS-P-wetherbeei_contig6225:455..2396 | 1683186898.515272-CDS-P-wetherbeei_contig6225:455..2396 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6225 456..2396 + |
| 1683186898.5233345-CDS-P-wetherbeei_contig6225:2649..2847 | 1683186898.5233345-CDS-P-wetherbeei_contig6225:2649..2847 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6225 2650..2847 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6225.1.1 >prot_P-wetherbeei_contig6225.1.1 ID=prot_P-wetherbeei_contig6225.1.1|Name=mRNA_P-wetherbeei_contig6225.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=727bp
MANKPACAFGASGKIFWTIDDESVLVVYSANGAETLASWCLPRRPTATLE
FEAADRLVILAALPKGTSAAELWLLDPASGFILIKYRNLVSVPTCLALAQ
TLDCSMGSTSTPLVAVPPPSAGPVIAVAIGCDDGAVFRMNFFLDVERAIE
EQAETGAAIVVSLSDSEPDVPACSDGGAGGGGGNVAAVTALAAQGGGIAP
GGPALLAVGSAGGGVALWELSGKPAPLMAAWTTQNRAAVTALAFQPTPDS
EDPAAAAAAMAAATRPTKQVLLWAGVGPQAVLLCCALPEGSGDGGSGGDG
SDGADAEEAGASVHMRALAWTVPQANTVVARGGLVALLRRPVSSGGDRPR
AIIVLASARAGHWERSGFALSAYDATKAVQDARGGNSGGGGGGGRTGMSL
VSVLCGDTVNADAFWIEAESAATAAPHGNCEVEVPVAFVSVPLERYDPAG
QQAAKRHYIRTSGFKLAVELERLGPWAAFGGGDMVDSTLEQLACRAEEVC
GGAAGLWVGNFLFSGDGDGEGDEPDAGGPPRLSFAVRAALITMQAALMFG
KIALVREHILATEDAATVEEGGAGGGGWALKHPYMVQRWAHEALREILEA
VTRAGPVPAVAEMELTTAAAVAAAAAADHDGMTAGQLDAMLTRAESLRAV
LEALASRIELEVSLGHSADARAARRKRLAPSAADVDAALADAEATFSLCR
LARLAATDPAMGAVTGQSGVQLWAQTS back to topmRNA from alignment at P-wetherbeei_contig6225:207..2847+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig6225.1.1 ID=mRNA_P-wetherbeei_contig6225.1.1|Name=mRNA_P-wetherbeei_contig6225.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2641bp|location=Sequence derived from alignment at P-wetherbeei_contig6225:207..2847+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAACAAACCTGCGTGCGCCTTCGGTGCCTCCGGCAAGGTGAGCAA
AGCCGGCAAAAGGTTGGTGACATGGCTCGTTCTGCCCTCACAGTCCAATG
CAGTTTGGAGGGCTGCTGCTGCTGCCAGCCGGTCGGCCACGACCCTCGAG
CGAAGAAGTCATCCTTCGACCTCATTTGGAACGGCTTTTCCTTTCTCGTA
CTTCTCTTTGATTTTAAACGACTTCCTTCCCCTCCGTGCTTCAAAACAGA
TCTTTTGGACCATCGATGACGAGAGCGTTCTCGTAGTGTATAGCGCGAAC
GGCGCGGAGACGTTGGCGTCATGGTGTCTCCCGCGGCGCCCGACTGCGAC
GCTCGAATTTGAGGCTGCCGATCGCCTCGTCATCTTGGCGGCGCTCCCCA
AAGGCACTTCGGCAGCGGAGCTCTGGCTTCTCGACCCGGCGAGCGGCTTC
ATTTTGATAAAATATAGGAACCTCGTGAGTGTCCCGACCTGCCTGGCTCT
GGCACAGACGCTGGACTGCTCCATGGGCAGCACTTCGACGCCTCTCGTCG
CTGTGCCGCCGCCGTCGGCGGGTCCGGTGATCGCCGTCGCCATCGGTTGT
GACGACGGCGCGGTCTTCCGCATGAACTTTTTCCTGGACGTAGAGCGGGC
TATCGAGGAGCAGGCGGAGACCGGAGCGGCAATCGTGGTGAGCCTGTCGG
ACTCTGAGCCGGACGTGCCAGCTTGCAGCGACGGTGGAGCGGGCGGCGGC
GGCGGGAATGTTGCCGCCGTTACGGCCCTGGCGGCGCAGGGCGGCGGCAT
TGCGCCCGGGGGTCCTGCGCTGCTGGCGGTTGGGAGCGCCGGCGGCGGTG
TCGCCCTGTGGGAGCTTTCCGGTAAGCCGGCGCCGTTGATGGCAGCGTGG
ACTACACAGAACAGAGCCGCTGTCACGGCGCTCGCCTTTCAGCCGACCCC
CGACTCGGAGGATCCTGCCGCCGCCGCTGCTGCCATGGCGGCAGCGACTC
GGCCAACCAAGCAAGTGTTGCTTTGGGCGGGGGTCGGCCCGCAAGCGGTG
CTGCTGTGCTGTGCACTCCCCGAAGGCAGTGGTGACGGCGGCAGCGGCGG
CGACGGCTCTGACGGCGCCGACGCTGAAGAAGCTGGCGCATCAGTCCACA
TGCGAGCGCTAGCGTGGACGGTGCCTCAGGCCAACACGGTGGTGGCGCGC
GGCGGATTGGTGGCGCTGCTGCGGCGGCCCGTCAGCAGCGGCGGCGACCG
CCCGCGAGCCATCATTGTCCTCGCAAGCGCACGTGCTGGCCACTGGGAGC
GAAGCGGCTTTGCACTTTCGGCCTACGACGCCACCAAGGCCGTGCAGGAT
GCCAGAGGCGGGAACAGTGGCGGCGGTGGCGGCGGCGGCAGGACCGGCAT
GTCTCTCGTCTCCGTCCTGTGCGGCGACACTGTGAATGCCGATGCCTTCT
GGATCGAGGCAGAATCCGCTGCGACCGCCGCACCCCACGGCAACTGCGAG
GTCGAGGTGCCCGTGGCTTTCGTGTCGGTGCCGCTGGAACGTTACGACCC
CGCCGGCCAGCAGGCGGCCAAACGACACTATATCCGCACGTCTGGCTTCA
AGCTGGCCGTAGAATTGGAACGTCTCGGCCCGTGGGCTGCCTTCGGTGGC
GGCGACATGGTCGACTCGACGCTTGAACAATTGGCGTGCCGGGCGGAGGA
AGTCTGCGGCGGGGCGGCAGGCCTATGGGTGGGAAACTTTCTCTTTTCGG
GCGACGGTGACGGAGAAGGAGACGAACCGGATGCGGGCGGGCCTCCGCGA
CTTTCCTTTGCAGTCCGAGCGGCGCTGATCACCATGCAAGCCGCGCTGAT
GTTCGGCAAGATTGCGCTTGTGAGAGAGCACATTCTCGCCACCGAAGACG
CCGCGACCGTGGAAGAAGGCGGTGCCGGCGGCGGAGGGTGGGCGCTCAAG
CACCCCTACATGGTGCAGCGGTGGGCGCACGAGGCGCTGCGCGAGATTTT
GGAGGCTGTGACTCGCGCCGGGCCGGTTCCCGCTGTGGCGGAGATGGAGC
TGACCACAGCGGCGGCGGTGGCAGCGGCAGCCGCGGCAGACCATGACGGG
ATGACGGCGGGTCAGCTGGACGCCATGCTGACGCGCGCGGAGAGTCTTCG
CGCGGTTCTGGAGGCGCTGGCTTCCCGCATCGAGCTCGAGGCGCGTTTTG
CGTTTGTCTTTTCTGCTTGCTTGCCAAAGGGGGGCTTTTCCTTGTGTCTC
TGCGTGGAATATGGTGTTTTTGGCAATTTTTGCTTTCGACTGGCGGCGCC
AGGCAGATTTTTTTGACCATCTTAGAATGGTACATTCTCCATTTGTACGA
AGATGTTGAAAGCAATAGATAACCGCGGATCTCTCCACGTCAACCACACC
CATCAAACAACCTTACCACCCGTTACTTGTCAAACACAAATAGGTGTCTT
TGGGGCACTCCGCCGATGCCCGGGCGGCGCGCCGCAAACGGCTGGCGCCG
TCCGCCGCTGACGTCGACGCGGCGCTGGCGGACGCCGAAGCCACCTTCTC
CCTCTGCCGCCTCGCGCGGCTCGCCGCCACCGACCCGGCCATGGGCGCCG
TCACCGGCCAGTCCGGCGTGCAGCTCTGGGCGCAGACGAGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig6225:207..2847+ >mRNA_P-wetherbeei_contig6225.1.1 ID=mRNA_P-wetherbeei_contig6225.1.1|Name=mRNA_P-wetherbeei_contig6225.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2181bp|location=Sequence derived from alignment at P-wetherbeei_contig6225:207..2847+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAACAAACCTGCGTGCGCCTTCGGTGCCTCCGGCAAGATCTTTTG
GACCATCGATGACGAGAGCGTTCTCGTAGTGTATAGCGCGAACGGCGCGG
AGACGTTGGCGTCATGGTGTCTCCCGCGGCGCCCGACTGCGACGCTCGAA
TTTGAGGCTGCCGATCGCCTCGTCATCTTGGCGGCGCTCCCCAAAGGCAC
TTCGGCAGCGGAGCTCTGGCTTCTCGACCCGGCGAGCGGCTTCATTTTGA
TAAAATATAGGAACCTCGTGAGTGTCCCGACCTGCCTGGCTCTGGCACAG
ACGCTGGACTGCTCCATGGGCAGCACTTCGACGCCTCTCGTCGCTGTGCC
GCCGCCGTCGGCGGGTCCGGTGATCGCCGTCGCCATCGGTTGTGACGACG
GCGCGGTCTTCCGCATGAACTTTTTCCTGGACGTAGAGCGGGCTATCGAG
GAGCAGGCGGAGACCGGAGCGGCAATCGTGGTGAGCCTGTCGGACTCTGA
GCCGGACGTGCCAGCTTGCAGCGACGGTGGAGCGGGCGGCGGCGGCGGGA
ATGTTGCCGCCGTTACGGCCCTGGCGGCGCAGGGCGGCGGCATTGCGCCC
GGGGGTCCTGCGCTGCTGGCGGTTGGGAGCGCCGGCGGCGGTGTCGCCCT
GTGGGAGCTTTCCGGTAAGCCGGCGCCGTTGATGGCAGCGTGGACTACAC
AGAACAGAGCCGCTGTCACGGCGCTCGCCTTTCAGCCGACCCCCGACTCG
GAGGATCCTGCCGCCGCCGCTGCTGCCATGGCGGCAGCGACTCGGCCAAC
CAAGCAAGTGTTGCTTTGGGCGGGGGTCGGCCCGCAAGCGGTGCTGCTGT
GCTGTGCACTCCCCGAAGGCAGTGGTGACGGCGGCAGCGGCGGCGACGGC
TCTGACGGCGCCGACGCTGAAGAAGCTGGCGCATCAGTCCACATGCGAGC
GCTAGCGTGGACGGTGCCTCAGGCCAACACGGTGGTGGCGCGCGGCGGAT
TGGTGGCGCTGCTGCGGCGGCCCGTCAGCAGCGGCGGCGACCGCCCGCGA
GCCATCATTGTCCTCGCAAGCGCACGTGCTGGCCACTGGGAGCGAAGCGG
CTTTGCACTTTCGGCCTACGACGCCACCAAGGCCGTGCAGGATGCCAGAG
GCGGGAACAGTGGCGGCGGTGGCGGCGGCGGCAGGACCGGCATGTCTCTC
GTCTCCGTCCTGTGCGGCGACACTGTGAATGCCGATGCCTTCTGGATCGA
GGCAGAATCCGCTGCGACCGCCGCACCCCACGGCAACTGCGAGGTCGAGG
TGCCCGTGGCTTTCGTGTCGGTGCCGCTGGAACGTTACGACCCCGCCGGC
CAGCAGGCGGCCAAACGACACTATATCCGCACGTCTGGCTTCAAGCTGGC
CGTAGAATTGGAACGTCTCGGCCCGTGGGCTGCCTTCGGTGGCGGCGACA
TGGTCGACTCGACGCTTGAACAATTGGCGTGCCGGGCGGAGGAAGTCTGC
GGCGGGGCGGCAGGCCTATGGGTGGGAAACTTTCTCTTTTCGGGCGACGG
TGACGGAGAAGGAGACGAACCGGATGCGGGCGGGCCTCCGCGACTTTCCT
TTGCAGTCCGAGCGGCGCTGATCACCATGCAAGCCGCGCTGATGTTCGGC
AAGATTGCGCTTGTGAGAGAGCACATTCTCGCCACCGAAGACGCCGCGAC
CGTGGAAGAAGGCGGTGCCGGCGGCGGAGGGTGGGCGCTCAAGCACCCCT
ACATGGTGCAGCGGTGGGCGCACGAGGCGCTGCGCGAGATTTTGGAGGCT
GTGACTCGCGCCGGGCCGGTTCCCGCTGTGGCGGAGATGGAGCTGACCAC
AGCGGCGGCGGTGGCAGCGGCAGCCGCGGCAGACCATGACGGGATGACGG
CGGGTCAGCTGGACGCCATGCTGACGCGCGCGGAGAGTCTTCGCGCGGTT
CTGGAGGCGCTGGCTTCCCGCATCGAGCTCGAGGTGTCTTTGGGGCACTC
CGCCGATGCCCGGGCGGCGCGCCGCAAACGGCTGGCGCCGTCCGCCGCTG
ACGTCGACGCGGCGCTGGCGGACGCCGAAGCCACCTTCTCCCTCTGCCGC
CTCGCGCGGCTCGCCGCCACCGACCCGGCCATGGGCGCCGTCACCGGCCA
GTCCGGCGTGCAGCTCTGGGCGCAGACGAGC back to top
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