mRNA_P-wetherbeei_contig6221.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6221.1.1
Unique NamemRNA_P-wetherbeei_contig6221.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: L8H708_ACACA (RNase NYN domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H708_ACACA)

HSP 1 Score: 107 bits (267), Expect = 5.540e-20
Identity = 61/182 (33.52%), Postives = 87/182 (47.80%), Query Frame = 2 
Query:  782 VERPMIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPDSSIMHVV 1327
            VE+P IVID  NVA  H       +  I+ A+ +++  G   +AFI   Y++R   PP                 D +        + D  E L  + D G V L P  D DD Y IEY +R G Y+++NDR+ DHI     R+  D  A + RW+  H + +T  + EFLPNPD + +  V
Sbjct:  605 VEKPEIVIDAPNVAMRHANNKKVSVRGIQLAIQYWQKKGHQVIAFIPEHYLHRKAPPP-----------------DKEQTLGEYMPMADNTELLAQLVDDGSVVLCPPQDYDDSYCIEYSKRHGAYIVTNDRYWDHIA----RQPEDQRAGVTRWLREHCISFTFAKNEFLPNPDFAFLPAV 765
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: UPI000644C6F7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C6F7)

HSP 1 Score: 90.5 bits (223), Expect = 1.040e-14
Identity = 55/172 (31.98%), Postives = 81/172 (47.09%), Query Frame = 2 
Query:  791 PMIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPD 1306
            PMIVIDG NVA  +G      + +IK A+ ++   GF  + F+      R P+ P                 D Q          D+++    + + G V +TP  D DD Y I+Y ++ G  +++NDR+ DHI   E    R  A   +R+I  H + +T  R EFLPNPD
Sbjct:  647 PMIVIDGPNVALKYGNSKTFSVLAIKKAIEYYSQRGFEVITFVPEHVATRKPSGP----------NAPMRITDFQPF-------VDDMKMFNELVEKGLVCMTPPQDYDDSYAIQYAKKHGAMIVTNDRYNDHINKQETEAERQKA---RRFIREHCISFTFARHEFLPNPD 798
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: K3W6K7_GLOUD (RNase NYN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K7_GLOUD)

HSP 1 Score: 82.0 bits (201), Expect = 6.260e-14
Identity = 54/179 (30.17%), Postives = 79/179 (44.13%), Query Frame = 2 
Query:  776 DSVERPMIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPDSS 1312
            D   + +IVID  NVA  HG         I+ A+ +F   G   V F+ +  V                       + S G       + D +  LQ + + G +  TP  D DD Y I+Y     G +++ND +RDH+  +     R VA  ++ W+ AHR+ YT V  EFLPNP+ S
Sbjct:   21 DDDPKCLIVIDAPNVAMRHGFHKKFSCIGIRLAIEYFVQRGHRVVGFLPDYLVEGDQV-------------GERKRMQSAGIDVPASKIPDNVALLQRLVEDGLLIPTPAQDYDDTYCIQYAGNHDGCVVTNDLYRDHVENMTGPRERKVA--MRSWLTAHRISYTWVGNEFLPNPNFS 184
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: A0A2R5G2I1_9STRA (NEDD4-binding protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2I1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.940e-14
Identity = 58/207 (28.02%), Postives = 92/207 (44.44%), Query Frame = 2 
Query:  764 LAGGDSVERPM-IVIDGANVAW------------HHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPDSSIMHVVDRIARS 1345
            + G  +  +P+ IV+D ANV+W              G  +   +  +   + FF+ YG   VA     + +                         QG          +   LQA+Q  G +  +P G+ DDLY+++YC R  G+L+SND++RDH      R  R++  +   WI A R+G+  VR  FLPNPD  IM + D + ++
Sbjct:    1 MLGAPAAAQPLSIVLDAANVSWAFVKAQPGWAQARSGAGIRPPVSGLVVCLEFFKSYGVSPVAICPTWWTHT----------------------KDQGIWGNPDWEAQDFARLQALQQEGTLFASPSGEHDDLYILDYCFRTDGFLVSNDKYRDH------RRERNLDPD---WIEARRIGFMFVRDSFLPNPDH-IMRLEDFVRQT 175
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: M2XZY7_GALSU (RNase NYN domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZY7_GALSU)

HSP 1 Score: 80.1 bits (196), Expect = 3.040e-12
Identity = 52/172 (30.23%), Postives = 74/172 (43.02%), Query Frame = 2 
Query:  788 RPMIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNP 1303
            +P+IV+DGAN+AW HG         I  A  FF    F  V F+  +Y        V                                 +L   +DT ++ LTP  D DD YM+ Y +R  G ++SNDRF DH   +EQ    +   +L +W++  RV +     EF+PNP
Sbjct:  187 KPLIVLDGANIAWKHGNHQKFSALGIVLAFEFFSQRQFECVCFLPETYWQPSTESSV-------------------------------WTQLAVWRDTHRLILTPVDDYDDSYMLFYAQRHSGLIVSNDRFLDH---MEQTSVDEQKRKLAKWLSRCRVTFVFGDNEFIPNP 324
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: W4FWI5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWI5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.710e-12
Identity = 51/171 (29.82%), Postives = 77/171 (45.03%), Query Frame = 2 
Query:  794 MIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPD 1306
            +IV+D ANVA  HG         I+    ++   G   +AF+ +  +                       + + G       + D++  LQAM+  G V  TP  D DD Y I+Y     G L++ND FRDH+  ++    R     ++ W+ AHR+ +T V  EFLPNPD
Sbjct:  800 LIVVDAANVAMRHGLNTKFSCRGIRLVFDYYIARGHKAIAFLPDYLLQY-------------ESVGAQKRMANVGFDVSPTKLPDDVTLLQAMKQEGLVIATPPQDYDDSYCIQYAGTHDGCLVTNDLFRDHLDNIKPSHKRGA---MRDWLKAHRISFTWVGDEFLPNPD 954
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: A0A7S1ERE9_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERE9_9RHOD)

HSP 1 Score: 76.6 bits (187), Expect = 5.340e-11
Identity = 52/173 (30.06%), Postives = 80/173 (46.24%), Query Frame = 2 
Query:  797 IVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGF-MVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHIL---ALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNP 1303
            +V+DG NV W HGQ V      I  A+ +F    F  +AFI  S ++                      L S+        M++ +LE    M     + +TP+ D DD+Y ++Y RR G  L+SND+  DH++   A+ ++   D    L  W++  R+ +T    EFLPNP
Sbjct:  199 VVLDGPNVGWRHGQNVKFSWNGIFLALHWFYSRKFYPIAFIPESRISA---------------------LRSESIQNSSLEMISKQLEYWTGMH---CIVVTPKDDYDDVYSLDYARRNGCLLVSNDKLDDHVIQAAAISEQNKMD----LSNWLDQCRLSFTFHVDEFLPNP 343
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: A0A0H5RBW3_9EUKA (RNase NYN domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBW3_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 5.950e-11
Identity = 49/176 (27.84%), Postives = 84/176 (47.73%), Query Frame = 2 
Query:  794 MIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFI-----LNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPD 1306
            ++VIDG NVA H G+     +  ++ A+++F   G     F+     +  +  +   P  P                        +   D+L  L  +   GQ+++TP GD DD Y++++  +  G +ISND+FRD +    +++GR   AEL +WI  H   ++ VR +F PNP+
Sbjct:  191 LVVIDGCNVAIHAGRTETFSVAGLQNAIAYFTKAGCRVETFLPQVCLIEGFKPKSKHPDEP------------------------WRPPDDLANLNRLFVEGQISVTPSGDYDDSYILQFAMQNDGIIISNDKFRDIV----KKQGR---AELSQWIKQHVCSFSYVRLDFFPNPN 335
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BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: A0A3R6VGX7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VGX7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.370e-10
Identity = 52/178 (29.21%), Postives = 78/178 (43.82%), Query Frame = 2 
Query:  794 MIVIDGANVAWHHGQRVGRRLESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYC---RRRGGYLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPDSSIM 1318
            +IV+D ANVA  HG         I+  +  +   G   +AF+ +  +                       + + G       + D++  LQAM   G +  TP  D DD Y I+Y    R   G +++ND FRDH+  ++  + R    E   W+ AHR+ +T V  EFLPNPD   M
Sbjct:  970 LIVVDAANVAMRHGLNAKFSCRGIRLVIDHYIARGHKVIAFLPDYLLKYETV-------------GAQKRMANVGYDVSPTKLPDDVTLLQAMVLEGLIIATPPQDYDDSYCIQYAGMARTHDGCVVTNDLFRDHLDNIKPSQKRSAMRE---WLKAHRISFTWVGDEFLPNPDFRYM 1131
[Close]
BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Match: A0EDN2_PARTE (RNase NYN domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EDN2_PARTE)

HSP 1 Score: 74.3 bits (181), Expect = 8.910e-10
Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 2 
Query:  788 RPMIVIDGANVAWHHGQRVGRRL----ESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGXXXXXXLDSQGXXXXGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGGYLISNDRFRDHILALE----QREGRDVAAELQRWINAHRVGYTIVRGEFLPNPD 1306
            R +I+IDG NVA  +GQ   +      + +K A+ F+   G   +  + +   N                      L +Q        + D+++ L  M++ G     P  + DD YMI+Y R +GG +++NDR+ DHI ALE    +RE       L+ WI  + + YT ++ E +PNPD
Sbjct:  508 RKLIIIDGMNVAMRYGQEQSQVAKFCSQGLKCALEFWVKRGHDVMIILPDFCFNE--------------SEISKKKLTNQNNANK---LPDDVKMLLEMKNKGYAYGVPNWNYDDSYMIQYAREKGGLILTNDRYNDHIRALENNIVERE------RLKEWIRNNCISYTFLQNELVPNPD 665
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6221.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
L8H708_ACACA5.540e-2033.52RNase NYN domain-containing protein n=1 Tax=Acanth... [more]
UPI000644C6F71.040e-1431.98hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
K3W6K7_GLOUD6.260e-1430.17RNase NYN domain-containing protein n=1 Tax=Globis... [more]
A0A2R5G2I1_9STRA6.940e-1428.02NEDD4-binding protein 1 n=1 Tax=Hondaea fermentalg... [more]
M2XZY7_GALSU3.040e-1230.23RNase NYN domain-containing protein n=1 Tax=Galdie... [more]
W4FWI5_9STRA3.710e-1229.82Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A7S1ERE9_9RHOD5.340e-1130.06Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A0H5RBW3_9EUKA5.950e-1127.84RNase NYN domain-containing protein (Fragment) n=1... [more]
A0A3R6VGX7_9STRA1.370e-1029.21Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0EDN2_PARTE8.910e-1028.73RNase NYN domain-containing protein n=2 Tax=Parame... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6221contigP-wetherbeei_contig6221:40..3520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G542
Preferred nameEBS1
PFAMsEST1,EST1_DNA_bind,RNase_Zc3h12a
Model size3241
Max annot lvl2759|Eukaryota
KEGG koko:K11124,ko:K11132,ko:K18668
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000184,GO:0000228,GO:0000723,GO:0000781,GO:0000784,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003824,GO:0004518,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005697,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006278,GO:0006310,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0010638,GO:0010639,GO:0010833,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0017148,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031503,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032207,GO:0032208,GO:0032210,GO:0032212,GO:0032268,GO:0032269,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034248,GO:0034249,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0042162,GO:0042592,GO:0042886,GO:0043021,GO:0043047,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045184,GO:0045910,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046907,GO:0048239,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051052,GO:0051053,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051276,GO:0051641,GO:0051649,GO:0060249,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070034,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0071897,GO:0071919,GO:0072695,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0098687,GO:0098847,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1904356,GO:1904358,GO:1905324,GO:1990904,GO:2000112,GO:2000113,GO:2000278,GO:2000573,GO:2001251,GO:2001252
Exons2
Evalue1.6e-16
EggNOG OGsKOG2162@1|root,KOG3777@1|root,KOG2162@2759|Eukaryota,KOG3777@2759|Eukaryota
Descriptionzinc finger CCCH-type containing
Cds size2721
COG categoryS
BRITEko00000,ko00001,ko01000,ko03019,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.2302878-UTR-P-wetherbeei_contig6221:39..4531683186898.2302878-UTR-P-wetherbeei_contig6221:39..453Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6221 40..453 -
1683186898.2579165-UTR-P-wetherbeei_contig6221:3414..35201683186898.2579165-UTR-P-wetherbeei_contig6221:3414..3520Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6221 3415..3520 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.2404044-CDS-P-wetherbeei_contig6221:453..21131683186898.2404044-CDS-P-wetherbeei_contig6221:453..2113Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6221 454..2113 -
1683186898.2485793-CDS-P-wetherbeei_contig6221:2353..34141683186898.2485793-CDS-P-wetherbeei_contig6221:2353..3414Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6221 2354..3414 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6221.1.1prot_P-wetherbeei_contig6221.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6221 454..3414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6221.1.1

>prot_P-wetherbeei_contig6221.1.1 ID=prot_P-wetherbeei_contig6221.1.1|Name=mRNA_P-wetherbeei_contig6221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=907bp
MSADEDDGQGAFPFLHSTPPSTGRPASPANDNDGGGGGDTPRSSGKKKCT
NKHGVPVAKVKPAGHGVVEWDGALYTTLGNAVDSLPPQQQQQPLRGRNAY
IIERVEGPPATDHCMGSEGSSGSGGGRNGGRRGKDGGVGDGGGGGGGGRS
GVGGGGAGSVNPDDMMDDETWQPPLPQQRQQQQQQQRAHSSRAQPLHPPS
IPPLAPYQGRSGASVNPAALAGGDSVERPMIVIDGANVAWHHGQRVGRRL
ESIKTAVSFFEGYGFPTVAFILNSYVNRPPAPPVPGPAGLLAGGGGGGGL
DSQGDGGGGFMVTDELEELQAMQDTGQVALTPEGDRDDLYMIEYCRRRGG
YLISNDRFRDHILALEQREGRDVAAELQRWINAHRVGYTIVRGEFLPNPD
SSIMHVVDRIARSQGAAGAVATGGGPGTSPPWMGRAGAGPRTAGAIAAGF
IAAGATAAVPAAPVPTLPAAAAGAYCAPAAFSATAGTASTGGMWSVGETV
AGDRNTDNGEGRDNDLSGKWNRDGGGDGGGVGGGDGGGCFGGSGGNCIRP
DGGKDGHGYPLGNAGRNDGHGYPQGNAGGGGGHCQGKASGSGGGGRMYGG
GGSYGGGYGSGYGDSYSGLRSATPPLSLPLYQGSHAPAGSTVAPSNGSAS
RDGAASAAAQLPLPPGLSQPPGLTPSPAGLPPSVGLWVPRELEWWLAEAA
RFAAAGLRAAAQSAYFHCLNQLPEPPRAAAVAPPPDAPAAVRDAAGRRLE
LHRVRSRCFVELGLIAHAVQEAADAMQLALGDDRSRADHSACLRRYVEAG
HVLDTEHFDAVLRREAAIMLAHTQQQDHHHQQHHQQYHQQQQHHQQHHQQ
HHQQQRQQQQHHQQQHHQEQHHQHRPQQVAHLGTPPLTPPPPSFGSSPAV
GRRPGL*
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mRNA from alignment at P-wetherbeei_contig6221:40..3520-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6221.1.1 ID=mRNA_P-wetherbeei_contig6221.1.1|Name=mRNA_P-wetherbeei_contig6221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3481bp|location=Sequence derived from alignment at P-wetherbeei_contig6221:40..3520- (Phaeothamnion wetherbeei SAG_119_79)
GGGCAGTGCAGCTGCTGTAGGACGCGGCAACGCGATCCCGGGCAGCAAGG
CGAAGAAGAACCAGAGCTCTCGAGGCCACGGGCAGCATGGCCCCGTGAAT
GACAACATGTCTGCCGATGAAGACGATGGACAAGGTGCGTTCCCCTTCCT
TCATTCGACGCCGCCAAGCACCGGGCGCCCTGCAAGCCCGGCGAACGACA
ACGACGGCGGTGGCGGCGGCGACACGCCGCGGTCATCGGGGAAGAAGAAG
TGCACGAACAAGCACGGCGTCCCCGTGGCGAAGGTAAAGCCGGCCGGACA
CGGAGTGGTCGAATGGGACGGCGCGCTCTATACGACGCTCGGCAACGCCG
TCGACTCACTGCCGCCGCAGCAGCAGCAGCAGCCGCTGCGGGGCCGGAAC
GCCTACATCATCGAGCGAGTGGAGGGGCCCCCTGCCACCGACCACTGCAT
GGGCAGTGAAGGCAGCAGCGGCAGCGGCGGCGGCCGCAACGGCGGGCGCC
GTGGTAAAGACGGGGGCGTGGGCGACGGCGGCGGCGGCGGCGGCGGCGGT
CGCAGTGGCGTGGGCGGCGGTGGTGCCGGCTCCGTGAACCCTGATGACAT
GATGGACGATGAGACGTGGCAACCGCCGTTGCCGCAGCAGCGCCAGCAGC
AGCAACAGCAGCAGCGTGCACACTCGTCGCGCGCGCAGCCGCTGCACCCG
CCTTCAATCCCGCCGCTGGCTCCGTACCAAGGCCGTTCCGGAGCGAGCGT
AAACCCGGCCGCCCTGGCAGGCGGCGACAGTGTCGAGCGCCCCATGATCG
TGATCGACGGCGCCAACGTGGCGTGGCACCACGGGCAGCGCGTCGGACGG
CGCCTCGAGAGCATCAAGACCGCCGTCAGCTTCTTTGAAGGATACGGCTT
CCCCACTGTAGCCTTCATCCTCAACTCGTACGTCAACCGGCCGCCGGCGC
CGCCGGTGCCGGGCCCCGCCGGTCTCCTCGCCGGTGGCGGCGGCGGCGGC
GGTTTGGATTCACAGGGCGACGGCGGCGGCGGGTTCATGGTGACGGACGA
ATTGGAGGAGCTGCAGGCGATGCAGGACACCGGGCAGGTAGCGCTGACGC
CGGAGGGCGACCGCGACGACTTGTACATGATCGAGTACTGCCGTCGGCGG
GGCGGCTACCTCATCAGGTGAGGCTTTTGCCATCTCCGGTCACGTGGACC
GGCCGAGCTCCCATAAGGACTTTTCCTGTTTGGAACATGGATTGGGCTCG
TGTATCTCTTTTCATTTTGCTCTTTGGGGTGAGATGGGGCTCATTGGGCC
AAAGAAGCGCATCCTTTCGCGCTTTGGCCGCAGTGCTCTGACTTTGGCTT
GCGTTGTAACAGAATCGCCGGCTCTTGCTCCCCTTCCCCGCATCCATTTG
TCCTCAGTAACGACCGCTTCCGGGACCACATCCTGGCGCTGGAGCAGCGC
GAAGGCCGCGACGTGGCGGCGGAGCTGCAGCGCTGGATCAACGCCCACCG
CGTCGGCTATACCATCGTTCGTGGCGAGTTCCTTCCAAACCCTGATTCCT
CCATAATGCACGTCGTCGATCGCATTGCCCGGTCTCAGGGGGCGGCCGGC
GCTGTGGCGACGGGTGGAGGGCCGGGAACGTCGCCGCCGTGGATGGGACG
GGCGGGGGCGGGGCCGAGGACGGCGGGAGCGATAGCGGCGGGGTTCATAG
CTGCTGGGGCCACGGCTGCAGTTCCAGCGGCGCCGGTGCCGACGTTGCCG
GCGGCGGCGGCAGGGGCGTACTGCGCGCCCGCCGCGTTCAGCGCGACGGC
AGGGACGGCGTCGACGGGGGGAATGTGGTCGGTGGGCGAGACGGTGGCGG
GAGACAGGAACACCGACAATGGCGAAGGGCGCGACAACGACCTCAGTGGG
AAGTGGAACCGTGACGGCGGCGGCGATGGCGGCGGCGTCGGCGGCGGTGA
TGGCGGCGGCTGTTTCGGCGGCAGTGGCGGCAACTGCATTCGCCCTGATG
GCGGCAAGGATGGCCATGGCTATCCTCTGGGTAATGCCGGCCGCAACGAT
GGCCATGGCTACCCTCAAGGCAACGCCGGCGGCGGCGGTGGTCACTGTCA
GGGCAAGGCGAGCGGCAGTGGCGGCGGCGGCCGCATGTACGGCGGCGGTG
GCAGCTATGGCGGCGGCTACGGCAGCGGCTACGGCGACAGCTACAGCGGT
CTCCGTTCGGCCACGCCTCCCTTGTCGCTGCCGCTGTACCAGGGCAGCCA
TGCGCCGGCAGGTTCCACCGTGGCGCCGAGCAACGGCAGCGCTTCCAGGG
ACGGCGCTGCCTCTGCTGCTGCTCAGCTGCCGCTGCCGCCGGGGCTGTCG
CAGCCGCCCGGGCTGACGCCATCGCCCGCGGGGCTGCCGCCGTCAGTGGG
GCTGTGGGTGCCACGCGAGCTCGAGTGGTGGCTGGCCGAGGCCGCTCGCT
TTGCCGCCGCGGGCCTCCGCGCGGCAGCTCAGTCGGCCTACTTCCACTGC
CTGAACCAGTTGCCCGAGCCCCCGCGCGCCGCCGCCGTCGCGCCACCTCC
AGACGCCCCGGCGGCGGTCCGCGACGCCGCGGGGCGCCGATTGGAGTTGC
ACCGGGTGCGTAGCCGCTGCTTTGTTGAGCTCGGCCTGATTGCACACGCA
GTCCAAGAGGCTGCCGACGCAATGCAGCTGGCGCTGGGTGATGACAGATC
CCGGGCGGACCACAGCGCGTGCCTGCGCCGCTACGTGGAGGCCGGACACG
TGCTGGATACGGAGCACTTCGATGCGGTCCTGCGGCGGGAGGCGGCGATA
ATGCTGGCCCATACGCAGCAGCAGGACCACCACCACCAGCAGCACCACCA
GCAGTACCACCAGCAGCAGCAGCACCATCAACAGCACCACCAGCAGCACC
ACCAGCAGCAGCGCCAGCAGCAACAGCACCACCAGCAGCAGCACCACCAG
GAGCAGCACCACCAGCACCGACCGCAGCAAGTGGCACACTTGGGAACGCC
GCCGCTGACGCCGCCGCCGCCGTCATTCGGTAGCAGCCCTGCTGTGGGGC
GCCGGCCGGGGCTCTAGCCCGGCGCTTGTTCGCTGCGAGCGCGTTCCTGC
GCGGCTTCCTCCGGCTGGCGGGCCGCCACGGCGCCACCGCCGTGCTTTGT
GTTGCATGGCGTTGCTGAAGCGGGCCCGGCGCGGCGCGGCCGGCGACGCC
TCGTGGATCCGCCAGGCCGCTTCGAAGCTGCCATCGGCTGGCTCCCTCCG
TCACGGCCTGGAATTTGCGTCCTGTTGCCGTCGATTACTGGCTTTTGCAG
AGGTATTGTTTTAAACAGAAGTGGTTAAAACGGGGAGGTGGAAATGTTAT
GAATTGGACATGGCAGCGGCACGGGGAACCAACAACTGGAGCTGGGCGGG
ATGCATCACTGGCGGAAAGGAGAGGTAGAAAAGAGCGATATGTTGGAAGA
CGGTGGGGGGTGGGTTGGGGCCATAAGAGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6221:40..3520-

>mRNA_P-wetherbeei_contig6221.1.1 ID=mRNA_P-wetherbeei_contig6221.1.1|Name=mRNA_P-wetherbeei_contig6221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2721bp|location=Sequence derived from alignment at P-wetherbeei_contig6221:40..3520- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGCCGATGAAGACGATGGACAAGGTGCGTTCCCCTTCCTTCATTC
GACGCCGCCAAGCACCGGGCGCCCTGCAAGCCCGGCGAACGACAACGACG
GCGGTGGCGGCGGCGACACGCCGCGGTCATCGGGGAAGAAGAAGTGCACG
AACAAGCACGGCGTCCCCGTGGCGAAGGTAAAGCCGGCCGGACACGGAGT
GGTCGAATGGGACGGCGCGCTCTATACGACGCTCGGCAACGCCGTCGACT
CACTGCCGCCGCAGCAGCAGCAGCAGCCGCTGCGGGGCCGGAACGCCTAC
ATCATCGAGCGAGTGGAGGGGCCCCCTGCCACCGACCACTGCATGGGCAG
TGAAGGCAGCAGCGGCAGCGGCGGCGGCCGCAACGGCGGGCGCCGTGGTA
AAGACGGGGGCGTGGGCGACGGCGGCGGCGGCGGCGGCGGCGGTCGCAGT
GGCGTGGGCGGCGGTGGTGCCGGCTCCGTGAACCCTGATGACATGATGGA
CGATGAGACGTGGCAACCGCCGTTGCCGCAGCAGCGCCAGCAGCAGCAAC
AGCAGCAGCGTGCACACTCGTCGCGCGCGCAGCCGCTGCACCCGCCTTCA
ATCCCGCCGCTGGCTCCGTACCAAGGCCGTTCCGGAGCGAGCGTAAACCC
GGCCGCCCTGGCAGGCGGCGACAGTGTCGAGCGCCCCATGATCGTGATCG
ACGGCGCCAACGTGGCGTGGCACCACGGGCAGCGCGTCGGACGGCGCCTC
GAGAGCATCAAGACCGCCGTCAGCTTCTTTGAAGGATACGGCTTCCCCAC
TGTAGCCTTCATCCTCAACTCGTACGTCAACCGGCCGCCGGCGCCGCCGG
TGCCGGGCCCCGCCGGTCTCCTCGCCGGTGGCGGCGGCGGCGGCGGTTTG
GATTCACAGGGCGACGGCGGCGGCGGGTTCATGGTGACGGACGAATTGGA
GGAGCTGCAGGCGATGCAGGACACCGGGCAGGTAGCGCTGACGCCGGAGG
GCGACCGCGACGACTTGTACATGATCGAGTACTGCCGTCGGCGGGGCGGC
TACCTCATCAGTAACGACCGCTTCCGGGACCACATCCTGGCGCTGGAGCA
GCGCGAAGGCCGCGACGTGGCGGCGGAGCTGCAGCGCTGGATCAACGCCC
ACCGCGTCGGCTATACCATCGTTCGTGGCGAGTTCCTTCCAAACCCTGAT
TCCTCCATAATGCACGTCGTCGATCGCATTGCCCGGTCTCAGGGGGCGGC
CGGCGCTGTGGCGACGGGTGGAGGGCCGGGAACGTCGCCGCCGTGGATGG
GACGGGCGGGGGCGGGGCCGAGGACGGCGGGAGCGATAGCGGCGGGGTTC
ATAGCTGCTGGGGCCACGGCTGCAGTTCCAGCGGCGCCGGTGCCGACGTT
GCCGGCGGCGGCGGCAGGGGCGTACTGCGCGCCCGCCGCGTTCAGCGCGA
CGGCAGGGACGGCGTCGACGGGGGGAATGTGGTCGGTGGGCGAGACGGTG
GCGGGAGACAGGAACACCGACAATGGCGAAGGGCGCGACAACGACCTCAG
TGGGAAGTGGAACCGTGACGGCGGCGGCGATGGCGGCGGCGTCGGCGGCG
GTGATGGCGGCGGCTGTTTCGGCGGCAGTGGCGGCAACTGCATTCGCCCT
GATGGCGGCAAGGATGGCCATGGCTATCCTCTGGGTAATGCCGGCCGCAA
CGATGGCCATGGCTACCCTCAAGGCAACGCCGGCGGCGGCGGTGGTCACT
GTCAGGGCAAGGCGAGCGGCAGTGGCGGCGGCGGCCGCATGTACGGCGGC
GGTGGCAGCTATGGCGGCGGCTACGGCAGCGGCTACGGCGACAGCTACAG
CGGTCTCCGTTCGGCCACGCCTCCCTTGTCGCTGCCGCTGTACCAGGGCA
GCCATGCGCCGGCAGGTTCCACCGTGGCGCCGAGCAACGGCAGCGCTTCC
AGGGACGGCGCTGCCTCTGCTGCTGCTCAGCTGCCGCTGCCGCCGGGGCT
GTCGCAGCCGCCCGGGCTGACGCCATCGCCCGCGGGGCTGCCGCCGTCAG
TGGGGCTGTGGGTGCCACGCGAGCTCGAGTGGTGGCTGGCCGAGGCCGCT
CGCTTTGCCGCCGCGGGCCTCCGCGCGGCAGCTCAGTCGGCCTACTTCCA
CTGCCTGAACCAGTTGCCCGAGCCCCCGCGCGCCGCCGCCGTCGCGCCAC
CTCCAGACGCCCCGGCGGCGGTCCGCGACGCCGCGGGGCGCCGATTGGAG
TTGCACCGGGTGCGTAGCCGCTGCTTTGTTGAGCTCGGCCTGATTGCACA
CGCAGTCCAAGAGGCTGCCGACGCAATGCAGCTGGCGCTGGGTGATGACA
GATCCCGGGCGGACCACAGCGCGTGCCTGCGCCGCTACGTGGAGGCCGGA
CACGTGCTGGATACGGAGCACTTCGATGCGGTCCTGCGGCGGGAGGCGGC
GATAATGCTGGCCCATACGCAGCAGCAGGACCACCACCACCAGCAGCACC
ACCAGCAGTACCACCAGCAGCAGCAGCACCATCAACAGCACCACCAGCAG
CACCACCAGCAGCAGCGCCAGCAGCAACAGCACCACCAGCAGCAGCACCA
CCAGGAGCAGCACCACCAGCACCGACCGCAGCAAGTGGCACACTTGGGAA
CGCCGCCGCTGACGCCGCCGCCGCCGTCATTCGGTAGCAGCCCTGCTGTG
GGGCGCCGGCCGGGGCTCTAG
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