mRNA_P-wetherbeei_contig622.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A8J2WWE3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWE3_9STRA) HSP 1 Score: 152 bits (385), Expect = 8.980e-37 Identity = 99/280 (35.36%), Postives = 143/280 (51.07%), Query Frame = 1
Query: 604 IEKAVRIAQQSIEAGRSYDSSPSHRLQPPPPVSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQAREALE--GIADDTCVVYIDAFDTLLLPSAKDIVRRFLWLGAD----IVFGAEVRCGPDDGLRLLYP-PHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGSTCVLHGNGNG-KGWLDVLTRDFGRAGWP 1419
+++A + ++ R S + RL+P L ++ +A+ E L LR S G L V GLG+ WRG G+K+ L+ G+A D ++++DA+D LLLP+A + +RF L + +VF +EV C PD +RLLY P A FLN+G + GRA DVR ML +A D++ HH + G D DDQRWF RF + H +DA F L D+ D GD L ++ + +HGNGNG + D+ R GWP
Sbjct: 262 LDEATAVLNATLNNARGL-SVEARRLRPGG--GALRVVCVASSERAELTRLRASVKRLGAELTVLGLGQPWRGLGSKVALLAAHLDASGVAADDLILFLDAYDVLLLPAAAQLRKRFTALEREKQGAVVFNSEVNCAPDPSMRLLYGRPADGAPFRFLNSGIYLGRARDVRSMLAVVAADVEAHHASLGADPYRFDDQRWFNRFAIAFPERVH--LDARASFFHTLQDMDASDFDIVDGD---LVSRISEAAPMAVHGNGNGITAFHDLSRRLAADLGWP 533
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7S3JT65_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT65_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.060e-36 Identity = 116/352 (32.95%), Postives = 164/352 (46.59%), Query Frame = 1
Query: 505 LALD---EALEANPFFAETVHLYIDLAW-----------GLRKPRESIEKAVRIAQQSIEAG---RSYDSSPSHRLQPPPPVSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQAREAL-EGIADDTCVVYIDAFDTLLLPSAKDIVRRFLWL-----GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLP--------RPDVVAPPGDSALLRYTPTDGSTCVLHGNGNGKGWLDVLTRDFGR-AGWPPLPGGSSLTAAS*TL 1464
+ALD A NP FA HL ++ + P +E+A I QS++ D+ + P +L ++ +++++ L+ LRRSA G +LQ+ GL + WRG G+KI + L + I V+++DA+D LLL A +I + F+ IVFGAE+ C PD LRL+YP + FLN+GT GR D+R ML + D++ HH FG D DDQRW+ RF L A A +D LF L+D PD LLR + C++HGNGNG L+ R A WP P SSL + T
Sbjct: 205 IALDLLRTARNTNPKFAILSHLLANILYLKHIALHPNRIKRTDPAPLLEEARSILNQSLQDAVFPNVDDTCMTENKNP-----KLHVICVSSNDRPELQRLRRSAERLGWQLQILGLNQPWRGLGSKIELLQHYLSDSIPRSDMVLFVDAYDVLLLEPAINISQNFIQFIEPTRPGVIVFGAEMNCAPDPALRLMYPETAPSAFRFLNSGTILGRVHDIRYMLTAVRRDIEFHHVRFGADPFRFDDQRWYARFML--ANPHRAMLDITSRLFHTLHDTSPQHFDLSQHPDFE---NQHLLLRSKLFNTFPCLIHGNGNGIDTFHDLSEYLARNASWPDPP--SSLEGKTDTF 544
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7S2RJ31_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ31_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.710e-22 Identity = 74/222 (33.33%), Postives = 111/222 (50.00%), Query Frame = 1
Query: 706 LLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAW--RGFGTKIVQAREALE------GIADDTCVVYIDAFDTLLLPSAKD--IVRRFLWLGADIVFGAEVRCGPDDGLRLLYP-PHL------------------AAGRA-------FLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALN 1263
++++T+AT LE LR+SA G+ +++ G+G + +G GTK+ E L + DDT V+++DA+D LLLPS I RF +F E C PD G+ YP P+ AAG + N+G + RA +RRM+ E+ +D++RHH GGD DDQRW R +LRH A+D+ +FL+L+
Sbjct: 111 VVVVTVATDLGPELESLRQSAQIHGMDVEILGIGRVYGTKG-GTKLELMEEWLSPGGRGHDLPDDTLVLFVDAYDVLLLPSVSPEAIATRFAQFNVSAIFSGETGCWPDPGVAPGYPYPYFHHQPQFGDLYNVSNYRFPAAGGTPVAVPFPYPNSGGYLARAGYMRRMIIEVMDDMRRHHFVGGGDAKDADDQRWIQRHWLRHPED--VAIDSFAEIFLSLH 329
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A1I7VBN3_LOALO (Procollagen-lysine 5-dioxygenase n=1 Tax=Loa loa TaxID=7209 RepID=A0A1I7VBN3_LOALO) HSP 1 Score: 93.6 bits (231), Expect = 1.830e-16 Identity = 74/248 (29.84%), Postives = 124/248 (50.00%), Query Frame = 1
Query: 697 VSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQA--------REALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFL--RHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPT---DGSTCVLHGNGNGKGWLDVL 1389
V +LL++T+AT E L L+R+A RL+VFG+GE WRG T++ Q R++L D D ++++DA+D +LL + + I+R+F G +VF +E C P+ L YP + G +LN+G F G A ++ ++ D++ + DDQ ++TR +L + S +D+ VLF LN + G+ + + + + V+HGNG K +L+ L
Sbjct: 25 VPKLLVVTVATEETDGLRRLKRTAHTNHFRLEVFGMGEEWRGGNTRVEQGGGQKIRILRKSLGKYKDRDDLIILFVDAYDVILLGNEEQILRKFFTFFNGFRVVFSSEPFCWPNRNLAPKYPL-VNFGHRYLNSGVFMGFAPEIWSLISY--RDVEDND----------DDQLYYTRLYLDKQIRLSLKMTLDSMTVLFQNLNGASNDVKLEMSGERSGMYFIYNFIYNTHPLVIHGNGPSKLYLNHL 259
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: UPI001E270DCB (procollagen-lysine,2-oxoglutarate 5-dioxygenase n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E270DCB) HSP 1 Score: 93.2 bits (230), Expect = 2.430e-16 Identity = 68/247 (27.53%), Postives = 116/247 (46.96%), Query Frame = 1
Query: 703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF-------GTKIVQAREALEGIAD----DTCVVYIDAFDTLLLPSAKDIVRRFLWLGADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGSTCVLHGNGNGKGWLDVLTRDFGRA 1410
++L+ T+AT +N L+ RSA G++++V GLG+ W+G G K++ +E L + D DT +++ D++D + L +IV RF ++F AE C PD L YP + + AFLN+G F G ++V +L ++ + F + D+ R L H + ++ AL+D+ VV D ++ T + +LHGNG K L+ + +A
Sbjct: 26 DVLVFTVATEDNHGLQRYLRSANVYGIKVEVLGLGQQWKGGDMESPGGGQKVLLLKEKLNSLKDTVKKDTIILFTDSYDVVFLTDINEIVDRFKKTNKRLLFSAEPFCWPDHNLAKQYPD-IDSSNAFLNSGGFIGYYAEVLEVLNTKEITNEQDDQLFYTKIYLNDEYRNIFNMGLDHKCTIFQNLNG------ALSDVEL--VVNTTEDWPYIKNTAFNERPVILHGNGPSKLMLNQFSNYLAKA 263
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A0N5CLC2_THECL (Procollagen-lysine 5-dioxygenase n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CLC2_THECL) HSP 1 Score: 91.7 bits (226), Expect = 7.590e-16 Identity = 75/249 (30.12%), Postives = 123/249 (49.40%), Query Frame = 1
Query: 697 VSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWLGAD--IVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRML--EEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGST--CVLHGNGNGKGWLDVL 1389
+ +L ++T+AT E L+ L R+ A ++L+VFGLGE WRG G K+ R++L+ D D ++++D +DT+LL + ++I+ +FL + +VF AE C P L YP + G +LN+G F G A ++ ++L E + +D DDQ ++TR +L S +D+ VLF L+ + + DS + +T V+HGNG K L+ L
Sbjct: 22 IPKLTVVTVATEETDGLKRLARTVEAKDMKLEVFGLGEEWRGGDVTKEMGGGQKVRILRKSLDKYKDQDDIVILFVDGYDTILLGNEEEILGKFLTFFEEFRVVFSAETFCWPQKSLAPSYPI-VNFGYRYLNSGVFMGYAPEIWKLLNYENVEDD--------------DDDQLYYTRLYLDKQIRNSLQMTLDSTGVLFQNLHGVSEDVTLELDNDSGVYSIHNIIYNTHPIVIHGNGLSKLHLNRL 255
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7E4UXT6_PANRE (Procollagen-lysine 5-dioxygenase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4UXT6_PANRE) HSP 1 Score: 89.7 bits (221), Expect = 3.150e-15 Identity = 73/244 (29.92%), Postives = 115/244 (47.13%), Query Frame = 1
Query: 703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF-------GTKIVQAREALEG--IADDTCVVYIDAFDTLLLPSAKDIVRRFL--WLGADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDD-QRWFTRFFLRHAASGHAAVDAGRV--LFLALNDLPRPDVVAPPGDSALLRYTPTDGS-TCVLHGNGNGKGWLDVL 1389
+L L+T+AT E + L+++A A G L V GLGE W+G G K+ R+ + +T V++IDA+D L+L I+RRFL + A I+FGAE C PD L YP + G +LN+G F G +++ R++ GGD+ DD Q ++T+ +L +++ + +F LN + D Y + ++HGNG K L+ L
Sbjct: 26 KLYLITVATAETDGFKRLQKTAEAYGHELHVLGLGEKWQGGTMEGLGGGQKVRLLRQHFTDNQLDPNTIVMFIDAYDVLILEDPITILRRFLLEFPTAKILFGAEPYCWPDSTLAPKYPL-VTFGERYLNSGLFMGYITEIERLI------------TIGGDLYDFDDDQLYYTKIYLDPKLRAELSIELDSLSRIFQNLNGAVGQITIEHEDDGTSKLYNKEFNTHPAIVHGNGPSKISLNYL 256
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A1I8EDU4_WUCBA (Procollagen-lysine 5-dioxygenase n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A1I8EDU4_WUCBA) HSP 1 Score: 87.8 bits (216), Expect = 1.560e-14 Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 1
Query: 703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
ELL++T+AT E L L+R+A VRL+VFG+GE WRG G KI R++LE D D ++++DA+D + L + + I+R+F G +VF +E C P+ L YP + G +LN+G F G A ++ +++ +D++ + DDQ ++T +L S +D+ +LF LN
Sbjct: 30 ELLVVTVATEETDGLRRLKRTADINDVRLEVFGMGEQWRGGDIRVDEGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVIFLGNEEQILRKFFTFFDGFRLVFSSEPFCWPNRNLAPKYPL-VNFGYRYLNSGIFMGFAPEIWKLISY--KDVEDND----------DDQLYYTHLYLDEQIRISLKMTLDSMSILFQNLN 217
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A4E9FBW7_BRUMA (Procollagen-lysine 5-dioxygenase n=8 Tax=Onchocercidae TaxID=6296 RepID=A0A4E9FBW7_BRUMA) HSP 1 Score: 87.4 bits (215), Expect = 1.720e-14 Identity = 66/201 (32.84%), Postives = 104/201 (51.74%), Query Frame = 1
Query: 703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
ELL++T+AT E L L+R+A V L+VFG+GE WRG G KI R++LE D D ++++DA+D +LL + + I+R F G +VF +E C P+ L YP + G +LN+G F G A ++ ++ +D++ + DDQ ++TR +L S +D+ +LF LN
Sbjct: 30 ELLVVTVATEETDGLRRLKRTADINDVGLEVFGMGEQWRGGDVRVDKGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVILLGNEEQILRNFFTFFDGFRLVFSSEPFCWPNRSLAPKYPL-VNFGYRYLNSGVFMGFAPEIWNLISY--KDVEDND----------DDQLYYTRLYLDEQIRMSLKMTLDSMSILFQNLN 217
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A158PQJ2_BRUPA (P4Hc domain-containing protein n=2 Tax=Brugia TaxID=6278 RepID=A0A158PQJ2_BRUPA) HSP 1 Score: 87.0 bits (214), Expect = 3.180e-14 Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query: 703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
ELL++T+AT E L L+R+A V L+VFG+GE WRG G KI R++LE D D ++++DA+D +LL + + I+R F G +VF +E C P+ L YP + G +LN+G F G A ++ ++ D++ + DDQ ++TR +L S +D+ +LF LN
Sbjct: 30 ELLVVTVATEETDGLRRLKRTADINDVGLEVFGMGEQWRGGDVRVDKGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVILLGNEEQILRNFFTFFDGFRLVFSSEPFCWPNRSLAPKYPL-VNFGYRYLNSGVFMGFAPEIWNLISY--RDVEDND----------DDQLYYTRLYLDEQIRMSLKMTLDSMSILFQNLN 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig622.1.1 >prot_P-wetherbeei_contig622.1.1 ID=prot_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp MQRFGLGSFAVTEPEGYKSAPQSFLDQTDGFGDEEPEPATVLHTSLAEELback to top mRNA from alignment at P-wetherbeei_contig622:2185..4414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig622.1.1 ID=mRNA_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2230bp|location=Sequence derived from alignment at P-wetherbeei_contig622:2185..4414+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig622:2185..4414+ >mRNA_P-wetherbeei_contig622.1.1 ID=mRNA_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig622:2185..4414+ (Phaeothamnion wetherbeei SAG_119_79)back to top |