mRNA_P-wetherbeei_contig622.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig622.1.1
Unique NamemRNA_P-wetherbeei_contig622.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A8J2WWE3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWE3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 8.980e-37
Identity = 99/280 (35.36%), Postives = 143/280 (51.07%), Query Frame = 1
Query:  604 IEKAVRIAQQSIEAGRSYDSSPSHRLQPPPPVSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQAREALE--GIADDTCVVYIDAFDTLLLPSAKDIVRRFLWLGAD----IVFGAEVRCGPDDGLRLLYP-PHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGSTCVLHGNGNG-KGWLDVLTRDFGRAGWP 1419
            +++A  +   ++   R   S  + RL+P      L ++ +A+ E   L  LR S    G  L V GLG+ WRG G+K+      L+  G+A D  ++++DA+D LLLP+A  + +RF  L  +    +VF +EV C PD  +RLLY  P   A   FLN+G + GRA DVR ML  +A D++ HH + G D    DDQRWF RF +      H  +DA    F  L D+   D     GD   L    ++ +   +HGNGNG   + D+  R     GWP
Sbjct:  262 LDEATAVLNATLNNARGL-SVEARRLRPGG--GALRVVCVASSERAELTRLRASVKRLGAELTVLGLGQPWRGLGSKVALLAAHLDASGVAADDLILFLDAYDVLLLPAAAQLRKRFTALEREKQGAVVFNSEVNCAPDPSMRLLYGRPADGAPFRFLNSGIYLGRARDVRSMLAVVAADVEAHHASLGADPYRFDDQRWFNRFAIAFPERVH--LDARASFFHTLQDMDASDFDIVDGD---LVSRISEAAPMAVHGNGNGITAFHDLSRRLAADLGWP 533          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7S3JT65_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT65_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.060e-36
Identity = 116/352 (32.95%), Postives = 164/352 (46.59%), Query Frame = 1
Query:  505 LALD---EALEANPFFAETVHLYIDLAW-----------GLRKPRESIEKAVRIAQQSIEAG---RSYDSSPSHRLQPPPPVSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQAREAL-EGIADDTCVVYIDAFDTLLLPSAKDIVRRFLWL-----GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLP--------RPDVVAPPGDSALLRYTPTDGSTCVLHGNGNGKGWLDVLTRDFGR-AGWPPLPGGSSLTAAS*TL 1464
            +ALD    A   NP FA   HL  ++ +               P   +E+A  I  QS++        D+  +    P     +L ++ +++++   L+ LRRSA   G +LQ+ GL + WRG G+KI   +  L + I     V+++DA+D LLL  A +I + F+          IVFGAE+ C PD  LRL+YP    +   FLN+GT  GR  D+R ML  +  D++ HH  FG D    DDQRW+ RF L  A    A +D    LF  L+D           PD         LLR    +   C++HGNGNG      L+    R A WP  P  SSL   + T 
Sbjct:  205 IALDLLRTARNTNPKFAILSHLLANILYLKHIALHPNRIKRTDPAPLLEEARSILNQSLQDAVFPNVDDTCMTENKNP-----KLHVICVSSNDRPELQRLRRSAERLGWQLQILGLNQPWRGLGSKIELLQHYLSDSIPRSDMVLFVDAYDVLLLEPAINISQNFIQFIEPTRPGVIVFGAEMNCAPDPALRLMYPETAPSAFRFLNSGTILGRVHDIRYMLTAVRRDIEFHHVRFGADPFRFDDQRWYARFML--ANPHRAMLDITSRLFHTLHDTSPQHFDLSQHPDFE---NQHLLLRSKLFNTFPCLIHGNGNGIDTFHDLSEYLARNASWPDPP--SSLEGKTDTF 544          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7S2RJ31_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ31_9STRA)

HSP 1 Score: 108 bits (270), Expect = 9.710e-22
Identity = 74/222 (33.33%), Postives = 111/222 (50.00%), Query Frame = 1
Query:  706 LLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAW--RGFGTKIVQAREALE------GIADDTCVVYIDAFDTLLLPSAKD--IVRRFLWLGADIVFGAEVRCGPDDGLRLLYP-PHL------------------AAGRA-------FLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALN 1263
            ++++T+AT     LE LR+SA   G+ +++ G+G  +  +G GTK+    E L        + DDT V+++DA+D LLLPS     I  RF       +F  E  C PD G+   YP P+                   AAG         + N+G +  RA  +RRM+ E+ +D++RHH   GGD    DDQRW  R +LRH      A+D+   +FL+L+
Sbjct:  111 VVVVTVATDLGPELESLRQSAQIHGMDVEILGIGRVYGTKG-GTKLELMEEWLSPGGRGHDLPDDTLVLFVDAYDVLLLPSVSPEAIATRFAQFNVSAIFSGETGCWPDPGVAPGYPYPYFHHQPQFGDLYNVSNYRFPAAGGTPVAVPFPYPNSGGYLARAGYMRRMIIEVMDDMRRHHFVGGGDAKDADDQRWIQRHWLRHPED--VAIDSFAEIFLSLH 329          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A1I7VBN3_LOALO (Procollagen-lysine 5-dioxygenase n=1 Tax=Loa loa TaxID=7209 RepID=A0A1I7VBN3_LOALO)

HSP 1 Score: 93.6 bits (231), Expect = 1.830e-16
Identity = 74/248 (29.84%), Postives = 124/248 (50.00%), Query Frame = 1
Query:  697 VSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGFGTKIVQA--------REALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFL--RHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPT---DGSTCVLHGNGNGKGWLDVL 1389
            V +LL++T+AT E   L  L+R+A     RL+VFG+GE WRG  T++ Q         R++L    D  D  ++++DA+D +LL + + I+R+F     G  +VF +E  C P+  L   YP  +  G  +LN+G F G A ++  ++     D++ +           DDQ ++TR +L  +   S    +D+  VLF  LN       +   G+ + + +      +    V+HGNG  K +L+ L
Sbjct:   25 VPKLLVVTVATEETDGLRRLKRTAHTNHFRLEVFGMGEEWRGGNTRVEQGGGQKIRILRKSLGKYKDRDDLIILFVDAYDVILLGNEEQILRKFFTFFNGFRVVFSSEPFCWPNRNLAPKYPL-VNFGHRYLNSGVFMGFAPEIWSLISY--RDVEDND----------DDQLYYTRLYLDKQIRLSLKMTLDSMTVLFQNLNGASNDVKLEMSGERSGMYFIYNFIYNTHPLVIHGNGPSKLYLNHL 259          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: UPI001E270DCB (procollagen-lysine,2-oxoglutarate 5-dioxygenase n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E270DCB)

HSP 1 Score: 93.2 bits (230), Expect = 2.430e-16
Identity = 68/247 (27.53%), Postives = 116/247 (46.96%), Query Frame = 1
Query:  703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF-------GTKIVQAREALEGIAD----DTCVVYIDAFDTLLLPSAKDIVRRFLWLGADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGSTCVLHGNGNGKGWLDVLTRDFGRA 1410
            ++L+ T+AT +N  L+   RSA   G++++V GLG+ W+G        G K++  +E L  + D    DT +++ D++D + L    +IV RF      ++F AE  C PD  L   YP  + +  AFLN+G F G  ++V  +L       ++  + F   +   D+ R      L H  +    ++       AL+D+    VV    D   ++ T  +    +LHGNG  K  L+  +    +A
Sbjct:   26 DVLVFTVATEDNHGLQRYLRSANVYGIKVEVLGLGQQWKGGDMESPGGGQKVLLLKEKLNSLKDTVKKDTIILFTDSYDVVFLTDINEIVDRFKKTNKRLLFSAEPFCWPDHNLAKQYPD-IDSSNAFLNSGGFIGYYAEVLEVLNTKEITNEQDDQLFYTKIYLNDEYRNIFNMGLDHKCTIFQNLNG------ALSDVEL--VVNTTEDWPYIKNTAFNERPVILHGNGPSKLMLNQFSNYLAKA 263          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A0N5CLC2_THECL (Procollagen-lysine 5-dioxygenase n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CLC2_THECL)

HSP 1 Score: 91.7 bits (226), Expect = 7.590e-16
Identity = 75/249 (30.12%), Postives = 123/249 (49.40%), Query Frame = 1
Query:  697 VSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWLGAD--IVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRML--EEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALNDLPRPDVVAPPGDSALLRYTPTDGST--CVLHGNGNGKGWLDVL 1389
            + +L ++T+AT E   L+ L R+  A  ++L+VFGLGE WRG         G K+   R++L+   D  D  ++++D +DT+LL + ++I+ +FL    +  +VF AE  C P   L   YP  +  G  +LN+G F G A ++ ++L  E + +D               DDQ ++TR +L      S    +D+  VLF  L+ +     +    DS +        +T   V+HGNG  K  L+ L
Sbjct:   22 IPKLTVVTVATEETDGLKRLARTVEAKDMKLEVFGLGEEWRGGDVTKEMGGGQKVRILRKSLDKYKDQDDIVILFVDGYDTILLGNEEEILGKFLTFFEEFRVVFSAETFCWPQKSLAPSYPI-VNFGYRYLNSGVFMGYAPEIWKLLNYENVEDD--------------DDDQLYYTRLYLDKQIRNSLQMTLDSTGVLFQNLHGVSEDVTLELDNDSGVYSIHNIIYNTHPIVIHGNGLSKLHLNRL 255          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A7E4UXT6_PANRE (Procollagen-lysine 5-dioxygenase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4UXT6_PANRE)

HSP 1 Score: 89.7 bits (221), Expect = 3.150e-15
Identity = 73/244 (29.92%), Postives = 115/244 (47.13%), Query Frame = 1
Query:  703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF-------GTKIVQAREALEG--IADDTCVVYIDAFDTLLLPSAKDIVRRFL--WLGADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDD-QRWFTRFFLRHAASGHAAVDAGRV--LFLALNDLPRPDVVAPPGDSALLRYTPTDGS-TCVLHGNGNGKGWLDVL 1389
            +L L+T+AT E    + L+++A A G  L V GLGE W+G        G K+   R+      +  +T V++IDA+D L+L     I+RRFL  +  A I+FGAE  C PD  L   YP  +  G  +LN+G F G  +++ R++              GGD+   DD Q ++T+ +L        +++   +  +F  LN       +    D     Y     +   ++HGNG  K  L+ L
Sbjct:   26 KLYLITVATAETDGFKRLQKTAEAYGHELHVLGLGEKWQGGTMEGLGGGQKVRLLRQHFTDNQLDPNTIVMFIDAYDVLILEDPITILRRFLLEFPTAKILFGAEPYCWPDSTLAPKYPL-VTFGERYLNSGLFMGYITEIERLI------------TIGGDLYDFDDDQLYYTKIYLDPKLRAELSIELDSLSRIFQNLNGAVGQITIEHEDDGTSKLYNKEFNTHPAIVHGNGPSKISLNYL 256          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A1I8EDU4_WUCBA (Procollagen-lysine 5-dioxygenase n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A1I8EDU4_WUCBA)

HSP 1 Score: 87.8 bits (216), Expect = 1.560e-14
Identity = 65/201 (32.34%), Postives = 105/201 (52.24%), Query Frame = 1
Query:  703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
            ELL++T+AT E   L  L+R+A    VRL+VFG+GE WRG         G KI   R++LE   D  D  ++++DA+D + L + + I+R+F     G  +VF +E  C P+  L   YP  +  G  +LN+G F G A ++ +++    +D++ +           DDQ ++T  +L      S    +D+  +LF  LN
Sbjct:   30 ELLVVTVATEETDGLRRLKRTADINDVRLEVFGMGEQWRGGDIRVDEGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVIFLGNEEQILRKFFTFFDGFRLVFSSEPFCWPNRNLAPKYPL-VNFGYRYLNSGIFMGFAPEIWKLISY--KDVEDND----------DDQLYYTHLYLDEQIRISLKMTLDSMSILFQNLN 217          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A4E9FBW7_BRUMA (Procollagen-lysine 5-dioxygenase n=8 Tax=Onchocercidae TaxID=6296 RepID=A0A4E9FBW7_BRUMA)

HSP 1 Score: 87.4 bits (215), Expect = 1.720e-14
Identity = 66/201 (32.84%), Postives = 104/201 (51.74%), Query Frame = 1
Query:  703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
            ELL++T+AT E   L  L+R+A    V L+VFG+GE WRG         G KI   R++LE   D  D  ++++DA+D +LL + + I+R F     G  +VF +E  C P+  L   YP  +  G  +LN+G F G A ++  ++    +D++ +           DDQ ++TR +L      S    +D+  +LF  LN
Sbjct:   30 ELLVVTVATEETDGLRRLKRTADINDVGLEVFGMGEQWRGGDVRVDKGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVILLGNEEQILRNFFTFFDGFRLVFSSEPFCWPNRSLAPKYPL-VNFGYRYLNSGVFMGFAPEIWNLISY--KDVEDND----------DDQLYYTRLYLDEQIRMSLKMTLDSMSILFQNLN 217          
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Match: A0A158PQJ2_BRUPA (P4Hc domain-containing protein n=2 Tax=Brugia TaxID=6278 RepID=A0A158PQJ2_BRUPA)

HSP 1 Score: 87.0 bits (214), Expect = 3.180e-14
Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  703 ELLLLTLATHENRRLELLRRSAFAAGVRLQVFGLGEAWRGF--------GTKIVQAREALEGIAD--DTCVVYIDAFDTLLLPSAKDIVRRFLWL--GADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRMLEEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAA--SGHAAVDAGRVLFLALN 1263
            ELL++T+AT E   L  L+R+A    V L+VFG+GE WRG         G KI   R++LE   D  D  ++++DA+D +LL + + I+R F     G  +VF +E  C P+  L   YP  +  G  +LN+G F G A ++  ++     D++ +           DDQ ++TR +L      S    +D+  +LF  LN
Sbjct:   30 ELLVVTVATEETDGLRRLKRTADINDVGLEVFGMGEQWRGGDVRVDKGGGQKIRILRKSLEKYKDRNDLIILFVDAYDVILLGNEEQILRNFFTFFDGFRLVFSSEPFCWPNRSLAPKYPL-VNFGYRYLNSGVFMGFAPEIWNLISY--RDVEDND----------DDQLYYTRLYLDEQIRMSLKMTLDSMSILFQNLN 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig622.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A8J2WWE3_9STRA8.980e-3735.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JT65_9STRA4.060e-3632.95Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2RJ31_9STRA9.710e-2233.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1I7VBN3_LOALO1.830e-1629.84Procollagen-lysine 5-dioxygenase n=1 Tax=Loa loa T... [more]
UPI001E270DCB2.430e-1627.53procollagen-lysine,2-oxoglutarate 5-dioxygenase n=... [more]
A0A0N5CLC2_THECL7.590e-1630.12Procollagen-lysine 5-dioxygenase n=1 Tax=Thelazia ... [more]
A0A7E4UXT6_PANRE3.150e-1529.92Procollagen-lysine 5-dioxygenase n=1 Tax=Panagrell... [more]
A0A1I8EDU4_WUCBA1.560e-1432.34Procollagen-lysine 5-dioxygenase n=1 Tax=Wuchereri... [more]
A0A4E9FBW7_BRUMA1.720e-1432.84Procollagen-lysine 5-dioxygenase n=8 Tax=Onchocerc... [more]
A0A158PQJ2_BRUPA3.180e-1432.84P4Hc domain-containing protein n=2 Tax=Brugia TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig622contigP-wetherbeei_contig622:2185..4414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog43151.ADAC008050-PA
Preferred namePLOD1
PFAMs2OG-FeII_Oxy
Model size1508
Max annot lvl33208|Metazoa
KEGG rclassRC00005,RC00049,RC00397,RC00709
KEGG koko:K00473,ko:K13645,ko:K13646,ko:K13647,ko:K15174
KEGG ReactionR03376,R03380,R04491
KEGG Pathwayko00310,ko00514,ko04011,map00310,map00514,map04011
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001666,GO:0001701,GO:0001885,GO:0001886,GO:0002009,GO:0002064,GO:0003006,GO:0003008,GO:0003013,GO:0003018,GO:0003158,GO:0003382,GO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005794,GO:0005802,GO:0006011,GO:0006082,GO:0006139,GO:0006464,GO:0006486,GO:0006493,GO:0006520,GO:0006575,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007295,GO:0007399,GO:0008015,GO:0008104,GO:0008150,GO:0008152,GO:0008194,GO:0008198,GO:0008378,GO:0008475,GO:0008544,GO:0008652,GO:0009058,GO:0009059,GO:0009066,GO:0009067,GO:0009100,GO:0009101,GO:0009225,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016705,GO:0016706,GO:0016740,GO:0016757,GO:0016758,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0019842,GO:0019953,GO:0021915,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030198,GO:0030199,GO:0030246,GO:0030323,GO:0030324,GO:0030855,GO:0030867,GO:0031012,GO:0031090,GO:0031406,GO:0031418,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032963,GO:0032964,GO:0032989,GO:0032991,GO:0033036,GO:0033218,GO:0033823,GO:0034641,GO:0034645,GO:0035150,GO:0035250,GO:0035251,GO:0035295,GO:0035296,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042175,GO:0042221,GO:0042277,GO:0042311,GO:0042398,GO:0042802,GO:0042803,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045446,GO:0046394,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0046946,GO:0046947,GO:0046983,GO:0048029,GO:0048037,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048589,GO:0048609,GO:0048729,GO:0048730,GO:0048731,GO:0048856,GO:0048869,GO:0050211,GO:0050662,GO:0050880,GO:0050896,GO:0051179,GO:0051213,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060425,GO:0060429,GO:0060541,GO:0062023,GO:0065007,GO:0065008,GO:0070085,GO:0070482,GO:0070815,GO:0070831,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0071711,GO:0071840,GO:0090066,GO:0097359,GO:0097435,GO:0097746,GO:0097755,GO:0098588,GO:0098791,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
Exons4
Evalue7.41e-19
EggNOG OGsKOG1971@1|root,KOG1971@2759|Eukaryota,38DIW@33154|Opisthokonta,3BCUS@33208|Metazoa,3CS3C@33213|Bilateria,41TBU@6656|Arthropoda,3SHZJ@50557|Insecta,44X5M@7147|Diptera,45GX3@7148|Nematocera
EC1.14.11.4,2.4.1.50,2.4.1.66
DescriptionProcollagen-lysine,2-oxoglutarate 5-dioxygenase
Cds size1254
COG categoryE
BRITEko00000,ko00001,ko01000,ko01003,ko03021,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig622.1.1prot_P-wetherbeei_contig622.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig622 2389..4364 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.0266745-UTR-P-wetherbeei_contig622:2184..23881683186898.0266745-UTR-P-wetherbeei_contig622:2184..2388Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig622 2185..2388 +
1683186898.0868964-UTR-P-wetherbeei_contig622:4364..44141683186898.0868964-UTR-P-wetherbeei_contig622:4364..4414Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig622 4365..4414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.040368-CDS-P-wetherbeei_contig622:2388..25661683186898.040368-CDS-P-wetherbeei_contig622:2388..2566Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig622 2389..2566 +
1683186898.0506566-CDS-P-wetherbeei_contig622:2734..29851683186898.0506566-CDS-P-wetherbeei_contig622:2734..2985Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig622 2735..2985 +
1683186898.0685475-CDS-P-wetherbeei_contig622:3203..34531683186898.0685475-CDS-P-wetherbeei_contig622:3203..3453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig622 3204..3453 +
1683186898.077724-CDS-P-wetherbeei_contig622:3789..43641683186898.077724-CDS-P-wetherbeei_contig622:3789..4364Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig622 3790..4364 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig622.1.1

>prot_P-wetherbeei_contig622.1.1 ID=prot_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp
MQRFGLGSFAVTEPEGYKSAPQSFLDQTDGFGDEEPEPATVLHTSLAEEL
IMQELRTMNGTYLSISGFLPGTDAIGCLRRIPVIIDPVILRDASASSRLF
LALDEALEANPFFAETVHLYIDLAWGLRKPRESIEKAVRIAQQSIEAGRS
YDSSPSHRLQPPPPVSELLLLTLATHENRRLELLRRSAFAAGVRLQVFGL
GEAWRGFGTKIVQAREALEGIADDTCVVYIDAFDTLLLPSAKDIVRRFLW
LGADIVFGAEVRCGPDDGLRLLYPPHLAAGRAFLNAGTFAGRASDVRRML
EEIAEDLQRHHKAFGGDVLAVDDQRWFTRFFLRHAASGHAAVDAGRVLFL
ALNDLPRPDVVAPPGDSALLRYTPTDGSTCVLHGNGNGKGWLDVLTRDFG
RAGWPPLPGGSSLTAAS*
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mRNA from alignment at P-wetherbeei_contig622:2185..4414+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig622.1.1 ID=mRNA_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2230bp|location=Sequence derived from alignment at P-wetherbeei_contig622:2185..4414+ (Phaeothamnion wetherbeei SAG_119_79)
GCAGAAGGAGAAGAAGGTGCGCAAGGCGCTTCTTCGTGGTTTCACGTTTC TGGTGGCATCTCGGACGAGAGCGAATCGCTGGCCTATAACGCCCACCTTG TTTATTTGCAGAAAGGTCACGCAGCGGCATCGGATCCTGAGCAATTACTG TCAATCAGCATTTCCCGTTTCGACCTGGATGATCATCAGCTCGTGAAGGC GTACATGCAACGCTTTGGGCTCGGCAGCTTCGCAGTCACGGAACCTGAAG GCTACAAATCGGCCCCGCAATCTTTTTTGGACCAGACTGACGGTTTCGGC GACGAAGAACCCGAACCCGCGACCGTCCTGCATACATCCCTCGCCGAGGA ACTGATCATGCAAGAGTTGCGCACGATGAATGGTAAACTCGGGAGCTATT GTTCTTGAAGACCATGCAACTCTTCCAATGCACTCAATGCACGTGCAAGT GTGACACTTCATATACCTGGCGTCAATGCGTTGGCTTGCATTCTGATCTG CTCCCGTCCGTCCTTTTGCATCTCGGCCTCCTCTGACGCCGCGTTTACAG GGACGTACCTGAGCATCAGCGGCTTTCTGCCCGGCACGGACGCCATCGGC TGCCTCAGAAGAATACCCGTCATCATCGATCCCGTCATCCTGAGGGACGC CAGCGCGTCGTCACGCCTCTTTTTGGCCCTCGATGAAGCGCTTGAGGCGA ACCCTTTTTTTGCAGAGACGGTGCACCTATACATTGACCTAGCGTGGGGC CTGCGAAAGCCGCGGGAATCCATCGAGAAGGCCGTGCGCATCGCTCAACA GGCACGCCTTGTTTCAATCGGATCATTCAGCAGCAGTGGATCCTCATTTT CTTCAGATCCTTTTTATATAAACCGTTCTGCTTTACTCGTGTTGAAGGCT CTTTAACCGCTAATACGGGTCGCCGGTGCCACTGCGTTGATCTGCCGGTC GCAGCTTTGCTTTAGGGACTCTCTCTCGTCGATGGCTATCCGCCCGTTTG TTTCGTCCGTGCGTCGCAGTCCATTGAAGCGGGCAGAAGTTATGACTCGT CGCCGAGCCACCGCCTCCAGCCACCGCCGCCTGTCTCGGAGCTCCTGCTC CTCACGCTGGCCACGCATGAGAATCGCCGCCTGGAGCTGCTGCGGCGATC GGCGTTCGCCGCTGGGGTGCGCTTGCAAGTTTTCGGTCTGGGAGAAGCCT GGCGGGGCTTCGGCACCAAGATCGTCCAGGCACGAGAGGCTTTGGAAGGC ATCGCCGACGACACCTGTGGTGAGCGGCACTAAGCATTATACTAGCTTGC GGCGCGAAGGGGAAGCGGGATTGCAAAGGCGTGCTTGGAGTCCCTTCTGC TATAAGTTTAGGCTTCTGCTAACCTGACTGTAGTACCTCACGCGTCCGGC GTCCTTTCTCAGCGAGTGGATGCAATATCAGAGAGAGAAGGCTTTAGTGG AGGGGAGCTTTGTCGACAACGAGGAAATGAGGGAGGGAGGCTCGTAGGCC ACTTTTTGGCTCTCTCTGGGATCGCTGAACGAGATAGGGAAAGCAGTATT TCACAGATCCTGCCACAGCCGGCTGCTCTTTTCGTTCTTTCTTTTTCTTC CGCAGTGGTCTACATCGACGCCTTTGACACGCTGCTGCTGCCGTCGGCAA AGGATATCGTGCGCCGCTTCCTCTGGCTCGGCGCCGACATTGTCTTCGGG GCAGAAGTAAGGTGCGGCCCCGATGACGGGCTGCGGCTTTTGTACCCGCC GCACCTCGCCGCCGGTCGAGCATTCCTAAATGCTGGCACGTTTGCCGGTC GCGCGTCGGACGTCCGGCGCATGCTGGAAGAGATCGCCGAGGACCTTCAG CGGCACCACAAAGCCTTTGGCGGGGACGTCCTGGCCGTGGACGACCAGCG GTGGTTCACCCGCTTCTTCCTGCGGCACGCCGCCTCGGGCCACGCCGCGG TGGACGCCGGCCGCGTTCTTTTTCTGGCACTCAACGACTTGCCACGGCCC GACGTCGTCGCCCCCCCCGGAGACTCCGCGCTACTCCGGTATACCCCGAC AGACGGCTCGACGTGCGTGCTGCACGGGAATGGGAATGGAAAGGGCTGGC TCGACGTCTTGACGAGGGATTTTGGGCGCGCGGGCTGGCCGCCGCTGCCC GGAGGCAGCTCGTTGACTGCAGCCTCATGAACCTTATATAAGTTAGCCTT AGACTAATATGAGAGACGAAGGAATGAGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig622:2185..4414+

>mRNA_P-wetherbeei_contig622.1.1 ID=mRNA_P-wetherbeei_contig622.1.1|Name=mRNA_P-wetherbeei_contig622.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig622:2185..4414+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACGCTTTGGGCTCGGCAGCTTCGCAGTCACGGAACCTGAAGGCTA
CAAATCGGCCCCGCAATCTTTTTTGGACCAGACTGACGGTTTCGGCGACG
AAGAACCCGAACCCGCGACCGTCCTGCATACATCCCTCGCCGAGGAACTG
ATCATGCAAGAGTTGCGCACGATGAATGGGACGTACCTGAGCATCAGCGG
CTTTCTGCCCGGCACGGACGCCATCGGCTGCCTCAGAAGAATACCCGTCA
TCATCGATCCCGTCATCCTGAGGGACGCCAGCGCGTCGTCACGCCTCTTT
TTGGCCCTCGATGAAGCGCTTGAGGCGAACCCTTTTTTTGCAGAGACGGT
GCACCTATACATTGACCTAGCGTGGGGCCTGCGAAAGCCGCGGGAATCCA
TCGAGAAGGCCGTGCGCATCGCTCAACAGTCCATTGAAGCGGGCAGAAGT
TATGACTCGTCGCCGAGCCACCGCCTCCAGCCACCGCCGCCTGTCTCGGA
GCTCCTGCTCCTCACGCTGGCCACGCATGAGAATCGCCGCCTGGAGCTGC
TGCGGCGATCGGCGTTCGCCGCTGGGGTGCGCTTGCAAGTTTTCGGTCTG
GGAGAAGCCTGGCGGGGCTTCGGCACCAAGATCGTCCAGGCACGAGAGGC
TTTGGAAGGCATCGCCGACGACACCTGTGTGGTCTACATCGACGCCTTTG
ACACGCTGCTGCTGCCGTCGGCAAAGGATATCGTGCGCCGCTTCCTCTGG
CTCGGCGCCGACATTGTCTTCGGGGCAGAAGTAAGGTGCGGCCCCGATGA
CGGGCTGCGGCTTTTGTACCCGCCGCACCTCGCCGCCGGTCGAGCATTCC
TAAATGCTGGCACGTTTGCCGGTCGCGCGTCGGACGTCCGGCGCATGCTG
GAAGAGATCGCCGAGGACCTTCAGCGGCACCACAAAGCCTTTGGCGGGGA
CGTCCTGGCCGTGGACGACCAGCGGTGGTTCACCCGCTTCTTCCTGCGGC
ACGCCGCCTCGGGCCACGCCGCGGTGGACGCCGGCCGCGTTCTTTTTCTG
GCACTCAACGACTTGCCACGGCCCGACGTCGTCGCCCCCCCCGGAGACTC
CGCGCTACTCCGGTATACCCCGACAGACGGCTCGACGTGCGTGCTGCACG
GGAATGGGAATGGAAAGGGCTGGCTCGACGTCTTGACGAGGGATTTTGGG
CGCGCGGGCTGGCCGCCGCTGCCCGGAGGCAGCTCGTTGACTGCAGCCTC
ATGA
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