mRNA_P-wetherbeei_contig6218.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A7S1G2R6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G2R6_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.530e-34 Identity = 76/195 (38.97%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 88 KALPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALCRNS---LGCPPFASAFWHMAAPVLVWCV-----------------------HALLHGLWVFVMPHHHLRSAPGYTNTFLYL 594
+ LP++Y+AE+ LV+IR YY+ HWH+F LDFCY NA LV Y++FFP S+RLFVV F +A+G + + +RN+L H L KMTSC+IH+ P V +ALRW + + ++ C ++ L P AS+ AAP +W + H LL+ L V V+P+ LR Y ++ YL
Sbjct: 16 RVLPYVYIAELLLLVSIRLVYYYQLHWHYFCLDFCYFGNATLVAYLLFFPHSERLFVVCFAIAHGPLLFAVVAYRNSLVPHSLDKMTSCFIHIAPPIVLFALRWHA-VAGWSTCAHADLVLDLPQRASSPAAPAAPAALWTLEDVCESPGSLVWLLVVPMAAFAGHQLLYFLIVQVLPNKTLREDKTYLTSYRYL 209
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: UPI0003F0C0ED (uncharacterized protein LOC102805840 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C0ED) HSP 1 Score: 116 bits (291), Expect = 4.520e-28 Identity = 63/187 (33.69%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 43 FFVIRTSFVFWLLD----SKALPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALCRNSLGCPPFASAFWHMAAPVLVWCVHALLHGLWVFVMPHHHLRSAPGYTNTFLY 591
F + TS V W LP+ Y + LV IR ++Y+ + W FLLDFCY NA ++YI P + +F++ F +ANG W +++RN+L FH L KMTS +IHLLPA + + LRW R + PP W + P+ C+ + HGL ++ H ++ + Y +++ Y
Sbjct: 118 FLISVTSLVLWAYGLFNYHWLLPYYYTVVLPLLVAIRVWIYWTKKWQWFLLDFCYFANAMTMIYIWVIPNHEFMFMLVFALANGPLIWAILIYRNSLVFHSLDKMTSVFIHLLPAYLSFGLRWYPESISLHWYRPFVIDPPPPDFIWLVVVPLS--CI--VFHGLVYLILVHLLIKPSEDYLDSYRY 300
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: V4BQD1_LOTGI (Glycerophosphocholine acyltransferase 1 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BQD1_LOTGI) HSP 1 Score: 108 bits (269), Expect = 8.770e-25 Identity = 54/158 (34.18%), Postives = 87/158 (55.06%), Query Frame = 1
Query: 94 LPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALCRNSLGCPPFASAFWHMAAPVLVWCVHALLHGLW--VFVMPHHHLRS 561
LP+ Y L+ IR +Y++ W++FLLDFCY N L++ +P+ +F+ +F +ANG W ++FRN+L H + K+TS YIH LPA + +ALRW S D+ ++ + S W + P L + +H++L +F P +L S
Sbjct: 89 LPYYYTISTPCLLLIRTIIYWKYKWNYFLLDFCYYGNVLWYLFLWIWPQHGNIFMASFAVANGPLLWAAVIFRNSLVLHSVDKVTSVYIHTLPAFLSFALRWYSEDTSMKWRKDFVPDINNWSVQWLIVVPFLGFVLHSILXXXLTSIFPPPEEYLTS 246
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: UPI001E1D3293 (glycerophosphocholine acyltransferase 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3293) HSP 1 Score: 106 bits (265), Expect = 2.690e-24 Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 1
Query: 94 LPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALCRNSLGCPPFASAFWHMAAPVLVWCVHALLHGLWVFVMPHHHLRSAPGYTNTFLYL 594
LPF+Y LV I+ Y+R W +F++DFCY N ++Y+ +FP + LF V F +ANG ++RN+L +H K+TSCYIH LPA + +++RW + + + P W AAP + +H+ L+ L V ++ +R Y ++ YL
Sbjct: 79 LPFIYATSTPILVGIKTICYWRYKWQYFMVDFCYFANTLTLIYL-WFPGEEDLFRVVFALANGPVLVAAAVYRNSLVYHHHDKITSCYIHFLPALLTFSIRWFPESTSRFWIKPFISDTPAFDIVWLYAAPFAFFFLHSALYCLIVNIV----VRPKEPYVTSYSYL 240
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A3P3Y9P7_PLABS (Glycerophosphocholine acyltransferase 1 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y9P7_PLABS) HSP 1 Score: 107 bits (268), Expect = 4.480e-24 Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 106 YVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALC 429
Y + L+++R ++Y ++ + +FL+DFCY + +Y+ +PKS LFV F ANG AW L+RN+L FHDL K+TSC IH+LP + + LRW +DS ++C
Sbjct: 144 YTYLIVLLISLRIYLYRKEGYQYFLIDFCYFTTGLVYMYLYLYPKSSTLFVHVFAFANGPLAWAVPLWRNSLVFHDLDKLTSCAIHILPMLLTFQLRWFPSDSSLSIC 251
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A0G4IHJ4_PLABS (Glycerophosphocholine acyltransferase 1 (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IHJ4_PLABS) HSP 1 Score: 107 bits (268), Expect = 5.960e-24 Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 106 YVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALC 429
Y + L+++R ++Y ++ + +FL+DFCY + +Y+ +PKS LFV F ANG AW L+RN+L FHDL K+TSC IH+LP + + LRW +DS ++C
Sbjct: 195 YTYLIVLLISLRIYLYRKEGYQYFLIDFCYFTTGLVYMYLYLYPKSSTLFVHVFAFANGPLAWAVPLWRNSLVFHDLDKLTSCAIHILPMLLTFQLRWFPSDSSLSIC 302
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: UPI001CFDC4A5 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDC4A5) HSP 1 Score: 105 bits (263), Expect = 6.790e-24 Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 49 VIRTSFVFWLLDSKALPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSND-SRYALC 429
++ T+F+F K LP Y + L+ RFF ++ QH H+F++DFCY+ N L++Y+ F+P S +LF +TF NG + + +RN+L FHD K+TSC+IH P + +A+RW Y C
Sbjct: 72 LVSTTFIFGY-APKWLPQWYALWMVPLMIYRFFDFHAQHAHYFMIDFCYIGNLALMIYLFFYPTSPQLFALTFANNNGPILFAIVFWRNSLVFHDWDKLTSCFIHTFPPLISFAIRWFPEQFPEYTTC 198
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A210QSJ2_MIZYE (Glycerophosphocholine acyltransferase 1 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QSJ2_MIZYE) HSP 1 Score: 104 bits (259), Expect = 1.990e-23 Identity = 49/137 (35.77%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 7 PSKKHLGGLTYAFFVIRTSFVFWLLDSKAL------PFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRW 399
P++K L + + T V L AL P Y + +++IR F+Y++ WH+FLLDFCY N ++I + S R+F V FG+ANG W +++RN+L FH+ K++S +IH++P T+ +A+RW
Sbjct: 36 PTQKKKSRLREKLYHVFTVVVLVTLSHLALHAQWLLPIFYAISLPIVISIRIFIYFKNKWHYFLLDFCYYANLAWFIFI-WIADSPRMFAVVFGIANGPLLWAMVVYRNSLVFHNHDKVSSSFIHIVPGTLSFAIRW 171
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A6A5BIY4_NAEFO (Glycerophosphocholine acyltransferase 1 n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BIY4_NAEFO) HSP 1 Score: 104 bits (259), Expect = 2.530e-23 Identity = 45/117 (38.46%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 49 VIRTSFVFWLLDSKALPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRW 399
++ T+F+F + LP+ Y + L+ RF ++ QH H+F++DFCY+ N L++Y+ F+P S +LF +TF NG + + +RN+L FHD K+TSC+IH P + +A+RW
Sbjct: 71 LVSTTFIFGY-APRWLPYWYALWMAPLMIYRFVDFHAQHAHYFMIDFCYIGNLALMIYLFFYPSSPQLFALTFANNNGPILFAIVFWRNSLVFHDWDKLTSCFIHTFPPLISFAIRW 186
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Match: A0A1S3I5B5_LINUN (Glycerophosphocholine acyltransferase 1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I5B5_LINUN) HSP 1 Score: 103 bits (258), Expect = 3.310e-23 Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 1
Query: 46 FVIRTSFVFWLLDSK-----ALPFLYVAEVTTLVTIRFFVYYRQHWHHFLLDFCYVVNACLVLYIVFFPKSQRLFVVTFGMANGTAAWGGILFRNALQFHDLQKMTSCYIHLLPATVCYALRWMSNDSRYALCRNSLGCPPFASAFWHMAAPVLVW 498
+VI + VF+L + LP+ Y L+ IR +Y++ W F+LDFCY+ N +Y+ P + F++ F +ANG +G ++FRNAL FH L KMTS YIHLLPA + + +RW + PF S F AP +W
Sbjct: 65 YVISVATVFFLAHAVITIQWVLPYYYAVSAPILILIRIILYWKLKWQLFMLDFCYLGNTLCYVYMWAAPANDSFFLLVFSIANGPLVFGALMFRNALVFHSLDKMTSVYIHLLPAYLTFGIRWFPGSC------SVYWYQPFISVF---QAPSFIW 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6218.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6218.1.1 >prot_P-wetherbeei_contig6218.1.1 ID=prot_P-wetherbeei_contig6218.1.1|Name=mRNA_P-wetherbeei_contig6218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp MLPSKKHLGGLTYAFFVIRTSFVFWLLDSKALPFLYVAEVTTLVTIRFFVback to top mRNA from alignment at P-wetherbeei_contig6218:92..880+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6218.1.1 ID=mRNA_P-wetherbeei_contig6218.1.1|Name=mRNA_P-wetherbeei_contig6218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig6218:92..880+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6218:92..880+ >mRNA_P-wetherbeei_contig6218.1.1 ID=mRNA_P-wetherbeei_contig6218.1.1|Name=mRNA_P-wetherbeei_contig6218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig6218:92..880+ (Phaeothamnion wetherbeei SAG_119_79)back to top |