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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1347 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 846 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186895.4918406-UTR-P-wetherbeei_contig6193:1067..1234 | 1683186895.4918406-UTR-P-wetherbeei_contig6193:1067..1234 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig6193 1068..1234 - |
| 1683186895.5240939-UTR-P-wetherbeei_contig6193:2521..2855 | 1683186895.5240939-UTR-P-wetherbeei_contig6193:2521..2855 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig6193 2522..2855 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186895.5002694-CDS-P-wetherbeei_contig6193:1234..1736 | 1683186895.5002694-CDS-P-wetherbeei_contig6193:1234..1736 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6193 1235..1736 - |
| 1683186895.508145-CDS-P-wetherbeei_contig6193:2007..2085 | 1683186895.508145-CDS-P-wetherbeei_contig6193:2007..2085 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6193 2008..2085 - |
| 1683186895.516033-CDS-P-wetherbeei_contig6193:2255..2521 | 1683186895.516033-CDS-P-wetherbeei_contig6193:2255..2521 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6193 2256..2521 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6193.1.2 >prot_P-wetherbeei_contig6193.1.2 ID=prot_P-wetherbeei_contig6193.1.2|Name=mRNA_P-wetherbeei_contig6193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp
MIDLVDNVDQAYFPVFDLMSAVREGDVKAAKLFLDAGSDIHEFDRSGQKP
LHAAAYWGRADVVAILLERGADVNARSRSGATALHFGARCGSVETVEVLM
RHGADPKLENNEGSRSGDAFLSQVDFRTRRKIYAFLHWEPNERTAWTPPP
ACKDCDSCEPFSCKLHRQYELDLGLVGDLPGAAAAGDDDDDDDADNGDSD
EEADSDGAEGADDGGGGSQGGGGVGTGGGGGSSGVKGDTVIFAGGAAFEL
GGGCNDEGWGGAIPYSSDASEKKEVPLCAQS* back to topmRNA from alignment at P-wetherbeei_contig6193:1068..2855- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig6193.1.2 ID=mRNA_P-wetherbeei_contig6193.1.2|Name=mRNA_P-wetherbeei_contig6193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1788bp|location=Sequence derived from alignment at P-wetherbeei_contig6193:1068..2855- (Phaeothamnion wetherbeei SAG_119_79)
TTTAGTTAGTTGTCCATTCGCTATCGCTTTTAGTGGATGTCGCGCCCGGC
AGAACCCAAATGTGGTATCCCCCGCCTGATACTGGCCAAAAAAGACCCAT
TTGTATTCAGAAATAGGGGAAAAAATCCGGTTATTGGTATCACGCGCGGT
GATACCAGCGTGCCTAATTATGCTGACGGATTACGATGAATCTGGGAAAC
TCGGGCGTAAACGATTAACATTAACATAGGCACACGCATCTCCATCGCTG
GAGTATTACGCGTAAACGAGCATCAGGGCTTCGCCTGCATCCCCCTTTGT
CACACCAACTTCGGAAACAACTTTTCACGCGATCATGATTGACCTCGTTG
ACAACGTCGACCAGGCGTACTTTCCGGTGTTTGACCTCATGTCAGCCGTC
CGAGAGGGCGACGTCAAAGCGGCCAAGCTTTTCCTCGACGCCGGGTCCGA
CATTCACGAGTTTGATCGGAGCGGACAAAAGCCACTACACGCCGCAGCAT
ATTGGGGCCGGGCCGACGTGGTAGCGATCTTGCTGGAACGAGGGGCCGAT
GTGAATGCAAGGTCGCGGTCTGGTGCCACGGCTTTACATTTCGGAGCAAG
GTTAGCGGATTCAGTTCGCCTCTCATGCACTAGTTTTCCTGCTCCAGGAG
GTTGAAATGGTCTCGGTATCAGTAGTTTGCTGCCTATGTCTTCGTCTGTA
ACAATTTGGGGAACTCTTTACATCATATGGGCCAACAGTAACCCGTTTCC
ACTTCTCCTCTCTCTTGCAGGTGTGGCTCCGTGGAAACTGTTGAGGTGCT
CATGCGGCACGGTGCCGATCCAAAACTCGAGAACAACGAAGGGAGCAGGT
AAGACGAAGGCACGCGGAGTCGGTTGAGCAATTTATTCCTTCCTTGTTCA
TATGAGCAGCATTTTCCTGCATTGGCTCGCTGCTCATCAATAGGGCGACT
TCTGGCAATCTTTGGCACCTCACCTCTCTGTATCCCCGAGATACTCTTTT
TTGTATCAAGAAAGAAGGGGTTCGGAACGGGCTCATGAAGTCTGTCGCCT
CAGCGACCTCGCCGGCCCCGCCGTCCCATGCCACTATCCTGGCGGCTCCC
TGCGCCCCCCCCAAAAAAGGTCCGGTGACGCGTTCCTTTCGCAGGTGGAC
TTCCGCACCCGCAGAAAAATCTACGCTTTTCTGCATTGGGAGCCTAATGA
GCGGACGGCGTGGACGCCGCCACCAGCATGCAAGGACTGTGATTCCTGCG
AACCGTTCTCGTGCAAGCTGCACCGGCAGTACGAGCTCGACCTCGGCCTC
GTCGGTGACCTACCCGGCGCGGCGGCGGCCGGCGACGACGACGACGACGA
TGACGCCGATAACGGCGACAGTGACGAAGAAGCAGACAGCGATGGCGCGG
AAGGCGCTGACGACGGTGGCGGCGGCAGTCAAGGTGGTGGCGGCGTTGGC
ACTGGCGGCGGCGGCGGCAGCAGCGGCGTCAAGGGCGACACCGTGATTTT
CGCCGGCGGCGCTGCCTTTGAGCTAGGTGGCGGCTGCAATGATGAAGGGT
GGGGCGGTGCTATTCCGTACAGCAGCGATGCCAGTGAGAAAAAGGAGGTG
CCCCTTTGTGCTCAGAGCTGATTCGCTAGTGAAACTGAAACGGCGGGAGG
CTAAGTAGCTTCCTCTATGGTAGAGAAACCCAACAGGTAGAGAGGGGCGA
TCTGAGGTACCAAAAGTAAGAATGAAAGGATTGTTTTTAGGGAATGGACA
AATAAGCTAACGAACTTCAAGGAACGCTCTTTCACGCC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig6193:1068..2855- >mRNA_P-wetherbeei_contig6193.1.2 ID=mRNA_P-wetherbeei_contig6193.1.2|Name=mRNA_P-wetherbeei_contig6193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig6193:1068..2855- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTGACCTCGTTGACAACGTCGACCAGGCGTACTTTCCGGTGTTTGA
CCTCATGTCAGCCGTCCGAGAGGGCGACGTCAAAGCGGCCAAGCTTTTCC
TCGACGCCGGGTCCGACATTCACGAGTTTGATCGGAGCGGACAAAAGCCA
CTACACGCCGCAGCATATTGGGGCCGGGCCGACGTGGTAGCGATCTTGCT
GGAACGAGGGGCCGATGTGAATGCAAGGTCGCGGTCTGGTGCCACGGCTT
TACATTTCGGAGCAAGGTGTGGCTCCGTGGAAACTGTTGAGGTGCTCATG
CGGCACGGTGCCGATCCAAAACTCGAGAACAACGAAGGGAGCAGGTCCGG
TGACGCGTTCCTTTCGCAGGTGGACTTCCGCACCCGCAGAAAAATCTACG
CTTTTCTGCATTGGGAGCCTAATGAGCGGACGGCGTGGACGCCGCCACCA
GCATGCAAGGACTGTGATTCCTGCGAACCGTTCTCGTGCAAGCTGCACCG
GCAGTACGAGCTCGACCTCGGCCTCGTCGGTGACCTACCCGGCGCGGCGG
CGGCCGGCGACGACGACGACGACGATGACGCCGATAACGGCGACAGTGAC
GAAGAAGCAGACAGCGATGGCGCGGAAGGCGCTGACGACGGTGGCGGCGG
CAGTCAAGGTGGTGGCGGCGTTGGCACTGGCGGCGGCGGCGGCAGCAGCG
GCGTCAAGGGCGACACCGTGATTTTCGCCGGCGGCGCTGCCTTTGAGCTA
GGTGGCGGCTGCAATGATGAAGGGTGGGGCGGTGCTATTCCGTACAGCAG
CGATGCCAGTGAGAAAAAGGAGGTGCCCCTTTGTGCTCAGAGCTGA back to top
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