mRNA_P-wetherbeei_contig6185.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6185.3.1
Unique NamemRNA_P-wetherbeei_contig6185.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: UPI0018C641F4 (flagellar motor protein MotA n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C641F4)

HSP 1 Score: 359 bits (922), Expect = 1.270e-121
Identity = 188/268 (70.15%), Postives = 221/268 (82.46%), Query Frame = 1
Query:   16 NDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLE 819
             +  ++E P V+L+HMVVFT++VVV++A+LFP+IK AF+AN  LNGLI+G L+LG  YAYRMVWRL PE NW+NGF++GQ S E  A PVLLAPMAT+LGD   RTVLS  TMRSLLDSLASRLDESRDL+RYLV LLIFLGLLGTFWGLL TVTSVGDAIK L+V S  S+ +FEELKSGLQ+PL+GMGLSFS+SLFGLAGSLILGFLDLKASQAQNRFYH LEDWLSTIT +  GEG   S    ++  DMQ LQR +D++G  ++
Sbjct:    3 QEAFIVEKPTVHLMHMVVFTIIVVVISAVLFPHIKDAFMANPLLNGLIIGALVLGTLYAYRMVWRLVPEANWLNGFKLGQGSTE--APPVLLAPMATILGDASGRTVLSPQTMRSLLDSLASRLDESRDLLRYLVGLLIFLGLLGTFWGLLATVTSVGDAIKGLNVSSAASADVFEELKSGLQKPLQGMGLSFSSSLFGLAGSLILGFLDLKASQAQNRFYHGLEDWLSTITGVATGEGAGAS-VPTFIHLDMQNLQRTIDRLGTHID 267          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A847ZS16_9HYPH (Flagellar motor protein MotA (Fragment) n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZS16_9HYPH)

HSP 1 Score: 357 bits (916), Expect = 1.990e-121
Identity = 191/271 (70.48%), Postives = 223/271 (82.29%), Query Frame = 1
Query:   16 NDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVG--EGGNQS-GANNYLRFDMQGLQRGLDKVGKQLE 819
             D+  LE P V+LVHM VFTLVV VL A+L+  IK AF+AN  LNGLI+  L+LG+ YAY  VWRL PE+NWVN FR+G++SD+ L  P LL PMAT+LGD   RTVLS  +MRSLLDSLASRLDE+RDL+RYLV LLIFLGLLGTFWGLL+TVTSVGDAI+ LDV S QSSS+FEELK+GLQRPL GMGLSFS+SLFGLAGSLILGF+DLKASQAQNRFYH+LEDWLSTITD+Q G  E G  S G   ++R DMQGLQR +D++ +Q+E
Sbjct:    3 QDSPQLEQPMVHLVHMAVFTLVVAVLGAVLYSGIKGAFMANPFLNGLILTTLILGMVYAYSRVWRLMPEVNWVNNFRLGENSDQPL--PTLLGPMATMLGDASRRTVLSPASMRSLLDSLASRLDEARDLLRYLVGLLIFLGLLGTFWGLLETVTSVGDAIRGLDVTSAQSSSVFEELKNGLQRPLAGMGLSFSSSLFGLAGSLILGFMDLKASQAQNRFYHDLEDWLSTITDVQAGTSEAGTASAGIPAFMRIDMQGLQRAIDRLAQQVE 271          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A6G6WP50_9HYPH (Flagellar motor protein MotA n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WP50_9HYPH)

HSP 1 Score: 346 bits (887), Expect = 8.970e-116
Identity = 179/274 (65.33%), Postives = 223/274 (81.39%), Query Frame = 1
Query:    4 MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            M D  + TVLE P+VYLV M VF LVV +L  +LFP+++ AF+AN GLNG+I+G LLLGV Y++R+V RL+PEINWVNGF++   + E    P LL PMATL  DR  RTVLS  +MRSLLDS+ASRLDE+RD+ RY+V LLIFLGLLGTFWGLL+TVTSVGDAI+ LDV S QS+++FEELK+GL+ PL GMGL+FS+SLFGLAGSLILGFL+L+ASQAQNRFY++LEDWLSTITDIQ GE G  +   +YLR DM GLQ+G++++ + L+ A
Sbjct:    1 MTDAKEHTVLELPKVYLVRMTVFMLVVTILAVVLFPHMQRAFMANPGLNGVIIGALLLGVGYSFRIVLRLWPEINWVNGFKISDPAHETTHTPRLLGPMATLFRDRPNRTVLSPLSMRSLLDSIASRLDEARDISRYMVGLLIFLGLLGTFWGLLETVTSVGDAIRALDVSSAQSATVFEELKTGLEAPLSGMGLAFSSSLFGLAGSLILGFLELQASQAQNRFYNDLEDWLSTITDIQAGESGTLT-VPHYLRLDMAGLQKGIERINQTLDEA 273          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A537NPZ4_9PROT (Flagellar motor protein MotA n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NPZ4_9PROT)

HSP 1 Score: 345 bits (885), Expect = 1.210e-115
Identity = 182/274 (66.42%), Postives = 225/274 (82.12%), Query Frame = 1
Query:    4 MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            M D  + TVLE P+VYLV M+VF LVV +L  +L+P++K AF+AN GLN +I+G LLLGV YA+RMV RL+PEI+W+NGFR+     E    P LL PMATL  DR  RTVLS  TMRSLLDSLASRLDE+RD+ RYLV+LLIFLGLLGTFWGLL+TV+SVGDAI++LDV S QS+++FEELK+GLQ PL GMGL+FS+SLFGLAGSLILGFLDL+ASQAQNRFY++LEDWLSTITD+QVGEGG  S   ++LR D+ GL +G++++ + L+ A
Sbjct:    1 MTDAREPTVLELPKVYLVRMMVFMLVVSILAVVLYPHMKRAFMANPGLNSVIIGALLLGVGYAFRMVVRLWPEISWLNGFRIANPGLEVTHTPRLLGPMATLFRDRLHRTVLSPLTMRSLLDSLASRLDEARDMSRYLVALLIFLGLLGTFWGLLETVSSVGDAIRSLDVTSAQSATVFEELKTGLQAPLSGMGLAFSSSLFGLAGSLILGFLDLQASQAQNRFYNDLEDWLSTITDLQVGEGGGTS-LPSHLRVDLAGLHKGIERINQTLDEA 273          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A7Y2BSQ1_9HYPH (Flagellar motor protein MotA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BSQ1_9HYPH)

HSP 1 Score: 342 bits (877), Expect = 1.740e-114
Identity = 180/275 (65.45%), Postives = 217/275 (78.91%), Query Frame = 1
Query:    4 MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVG-EGGNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            MA  +D  +L+ P+VYL+ M+VFT++V ++ A+LFP IK AF+AN GLNGLIV +LL+G+ YA+RMVWRLFPE+NWVN FR+   S E    P LLAPMATLL DR   T+LS  TMRSLLDSLASRLDESRD+ RYL+ LLIFLGLLGTFWGLL TV SVG  I+ LDV + +S+++FEELKSGL+ PL GMG SFS+SLFGLAGSL+LGFLDL+ASQ+QNRFY++LEDWLSTITDI  G  G +Q G   YLR DM  +Q G+DKV   LE A
Sbjct:    1 MALESDNEILDRPQVYLLRMMVFTILVAIVAAVLFPQIKLAFMANPGLNGLIVFVLLMGIIYAFRMVWRLFPEVNWVNSFRIADPSLELPYTPRLLAPMATLLRDRHGSTMLSPLTMRSLLDSLASRLDESRDISRYLIGLLIFLGLLGTFWGLLDTVNSVGQVIRQLDVATAESNTIFEELKSGLEAPLSGMGTSFSSSLFGLAGSLVLGFLDLQASQSQNRFYNDLEDWLSTITDIAAGGAGASQLGVPQYLRMDMSEIQEGIDKVNATLEDA 275          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A3B0SFF6_9ZZZZ (MotA/TolQ/ExbB proton channel family protein, probably associated with flagella n=2 Tax=root TaxID=1 RepID=A0A3B0SFF6_9ZZZZ)

HSP 1 Score: 342 bits (877), Expect = 2.120e-114
Identity = 179/275 (65.09%), Postives = 223/275 (81.09%), Query Frame = 1
Query:    1 SMADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            SM DI D+ VL+ PRVYLV M+VFTL+VV+L A+LFP  K AF++N GLNG+IV +LLLG+ YA+RMV+RLF E+NWVN FRVG    E    P LLAPM  LL +RQ  TVLST  +RSLLDSLASRLDE+RD+ RY++ LL+FLGLLGTFWGLLQTV SVGD IK+LDVGS  S+++F++LKSGL+ PL GMG SFS+SLFGL+GSLILGFLDL+ASQAQNRFY++LEDWL+++TDI++GE G Q+    YL+ DM GLQ G++++   LE A
Sbjct:    2 SMDDIEDSNVLDLPRVYLVKMMVFTLLVVILAAVLFPQFKRAFMSNPGLNGMIVLVLLLGLGYAFRMVYRLFREVNWVNHFRVGDPGLEIPYSPNLLAPMEALLANRQGATVLSTTALRSLLDSLASRLDEARDISRYMIGLLVFLGLLGTFWGLLQTVASVGDVIKSLDVGSADSATIFDDLKSGLEAPLAGMGTSFSSSLFGLSGSLILGFLDLQASQAQNRFYNSLEDWLASLTDIEMGEAG-QATMPQYLQMDMSGLQDGIERMNATLETA 275          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: UPI0019B93E07 (MotA/TolQ/ExbB proton channel family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019B93E07)

HSP 1 Score: 340 bits (871), Expect = 8.290e-114
Identity = 178/272 (65.44%), Postives = 217/272 (79.78%), Query Frame = 1
Query:    4 MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLE 819
            MA+   TT LEPPRVYLVHM+VFTL V +L  +L P + AAF+AN GLNG+I+G L+LG+ ++YRMVWRLFPE+ W+N FR  ++  + + +P LL PMA+LL +RQ   VLS  +MRSLLDSLASRLDESRD+ RYLVSLLIFLGLLGTFWGLL+TVTS+G AI  LDV SGQSS++FE LK GL+ PL GMGLSFSAS+FGLAGSLILGFLDLKASQAQNRFY++LEDWLSTITDI  G+G  Q     ++  D+Q LQR ++K+   +E
Sbjct:    1 MAEPTVTTSLEPPRVYLVHMMVFTLAVTILVLVLLPGLTAAFMANAGLNGVIIGALVLGMFHSYRMVWRLFPEVRWINSFRDSEADADMMRQPRLLGPMASLLRNRQSM-VLSPMSMRSLLDSLASRLDESRDMSRYLVSLLIFLGLLGTFWGLLETVTSIGSAINALDVTSGQSSTVFEGLKEGLKGPLTGMGLSFSASMFGLAGSLILGFLDLKASQAQNRFYNDLEDWLSTITDIAAGDGAPQPAMPPFIGLDLQSLQRSIEKLSGAME 271          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A7S8C5T0_9HYPH (Flagellar motor protein MotA n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C5T0_9HYPH)

HSP 1 Score: 331 bits (848), Expect = 4.200e-110
Identity = 170/276 (61.59%), Postives = 215/276 (77.90%), Query Frame = 1
Query:    4 MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEG--GNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            MA   + TVL  PR+YL+ M+VF ++V  L AIL+P I++AF+AN GLNGLIVG+L++G+ YA+R+VWRLFPE+NWVN FRV     E    P LL PMATLL DRQ R VLS  +MRSLLDSLASRLDESRD+ RYL+ LL+FLGLLGTFWGLLQTV+SVGD I+ LDV SG+S ++FEELKSGL+ PL+GMG +FS+SLFGLAGSL+LGFLDL+ASQAQNRFY +LEDWLS++TDI+ G+            L  D+ G++  L+++ + L+ A
Sbjct:    1 MAKGLEYTVLTQPRIYLIRMIVFVILVAFLAAILYPQIQSAFMANPGLNGLIVGVLVIGIGYAFRLVWRLFPEVNWVNNFRVADPGLEVAHPPSLLGPMATLLRDRQGRMVLSPLSMRSLLDSLASRLDESRDISRYLIGLLVFLGLLGTFWGLLQTVSSVGDTIRALDVTSGESGTIFEELKSGLEAPLQGMGTAFSSSLFGLAGSLVLGFLDLQASQAQNRFYTDLEDWLSSVTDIEAGDALAAGTGAVPTVLHADLSGMEESLERINRTLDNA 276          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A7V2SL84_9HYPH (Flagellar motor protein MotA (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2SL84_9HYPH)

HSP 1 Score: 317 bits (811), Expect = 5.410e-106
Identity = 162/245 (66.12%), Postives = 201/245 (82.04%), Query Frame = 1
Query:    1 SMADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGG 735
            SM D++D  VL+ PRVYLV M+VF L+V ++ A+L+P  K AF+ N GLNG+IV +LLLG+ YA RMVWRLF E+NWVN FRV     E    P LLAPM  LL +RQ  TVLS  T+RSLLDSLASRLDE+RD+ RY++ LL+FLGLLGTFWGLLQTV SVG+ I++LDVGS  SS++F++LKSGL+ PL GMG SFS+SLFGL+GSLILGFLDL+ASQAQNRFY++LEDWL+++TDI++GEGG
Sbjct:    2 SMDDLDDGNVLDLPRVYLVKMMVFILLVAIMAAVLYPQFKKAFMTNPGLNGMIVVVLLLGIGYALRMVWRLFREVNWVNHFRVADPGLEIPYSPNLLAPMEALLANRQGATVLSPTTLRSLLDSLASRLDEARDISRYMIGLLVFLGLLGTFWGLLQTVASVGNVIQSLDVGSADSSTIFDDLKSGLEAPLAGMGTSFSSSLFGLSGSLILGFLDLQASQAQNRFYNSLEDWLASLTDIEIGEGG 246          
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Match: A0A849EBY7_9HYPH (Flagellar motor protein MotA n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849EBY7_9HYPH)

HSP 1 Score: 317 bits (813), Expect = 5.190e-105
Identity = 162/266 (60.90%), Postives = 214/266 (80.45%), Query Frame = 1
Query:   28 VLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNGLIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMATLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGTFWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSASLFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGANNYLRFDMQGLQRGLDKVGKQLEGA 825
            VLE PRVYLV M VFT+++ + +A+LFPNI+ AF+AN GLNGLIV +LLLG+AY +RMV+RL+PE+NWVN FR+     E    P LLAPMA  L DR+  T+LS  T+RSLLDSLASRLDE+RD+ RY++ LLIFLGLLGTFWGLLQTV++VG+ I++L++ + QS ++FEELK+GL+ PL GMG SFS+SLFGLAGSL+LGFL+L+ASQAQNRFY++LEDWL+T+TDI  GE  N     ++++ +M  L+ G+D++ + LE A
Sbjct:    9 VLELPRVYLVRMAVFTILICIGSAVLFPNIQVAFMANPGLNGLIVVVLLLGIAYTFRMVFRLWPEVNWVNSFRIANPGLEIPHLPRLLAPMAAQLRDREGLTILSPITLRSLLDSLASRLDEARDISRYMIGLLIFLGLLGTFWGLLQTVSAVGETIRSLNISTAQSGTVFEELKAGLEAPLAGMGTSFSSSLFGLAGSLVLGFLELQASQAQNRFYNDLEDWLATLTDIDAGEYANTIDMPSHIQAEMSTLRSGMDRINRTLETA 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6185.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018C641F41.270e-12170.15flagellar motor protein MotA n=1 Tax=Aestuariivirg... [more]
A0A847ZS16_9HYPH1.990e-12170.48Flagellar motor protein MotA (Fragment) n=1 Tax=Ph... [more]
A0A6G6WP50_9HYPH8.970e-11665.33Flagellar motor protein MotA n=2 Tax=Hyphomicrobia... [more]
A0A537NPZ4_9PROT1.210e-11566.42Flagellar motor protein MotA n=2 Tax=Alphaproteoba... [more]
A0A7Y2BSQ1_9HYPH1.740e-11465.45Flagellar motor protein MotA n=1 Tax=Hyphomicrobia... [more]
A0A3B0SFF6_9ZZZZ2.120e-11465.09MotA/TolQ/ExbB proton channel family protein, prob... [more]
UPI0019B93E078.290e-11465.44MotA/TolQ/ExbB proton channel family protein n=1 T... [more]
A0A7S8C5T0_9HYPH4.200e-11061.59Flagellar motor protein MotA n=1 Tax=Kaustia mangr... [more]
A0A7V2SL84_9HYPH5.410e-10666.12Flagellar motor protein MotA (Fragment) n=1 Tax=Hy... [more]
A0A849EBY7_9HYPH5.190e-10560.90Flagellar motor protein MotA n=1 Tax=Anderseniella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6185contigP-wetherbeei_contig6185:2683..3507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog991905.SL003B_0899
Preferred nameMA20_18055
PFAMsMotA_ExbB
Model size825
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue8.12e-86
EggNOG OGsCOG1511@1|root,COG1511@2|Bacteria,1NYJB@1224|Proteobacteria,2TSX0@28211|Alphaproteobacteria,4BQ6X@82117|unclassified Alphaproteobacteria
DescriptionMotA TolQ ExbB proton channel family
Cds size822
COG categoryU
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186894.7701259-UTR-P-wetherbeei_contig6185:2682..26851683186894.7701259-UTR-P-wetherbeei_contig6185:2682..2685Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6185 2683..2685 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186894.7806528-CDS-P-wetherbeei_contig6185:2685..35071683186894.7806528-CDS-P-wetherbeei_contig6185:2685..3507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6185 2686..3507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6185.3.1prot_P-wetherbeei_contig6185.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6185 2686..3507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6185.3.1

>prot_P-wetherbeei_contig6185.3.1 ID=prot_P-wetherbeei_contig6185.3.1|Name=mRNA_P-wetherbeei_contig6185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MADINDTTVLEPPRVYLVHMVVFTLVVVVLTAILFPNIKAAFLANVGLNG
LIVGILLLGVAYAYRMVWRLFPEINWVNGFRVGQSSDENLAEPVLLAPMA
TLLGDRQERTVLSTNTMRSLLDSLASRLDESRDLMRYLVSLLIFLGLLGT
FWGLLQTVTSVGDAIKNLDVGSGQSSSMFEELKSGLQRPLEGMGLSFSAS
LFGLAGSLILGFLDLKASQAQNRFYHNLEDWLSTITDIQVGEGGNQSGAN
NYLRFDMQGLQRGLDKVGKQLEGA
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mRNA from alignment at P-wetherbeei_contig6185:2683..3507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6185.3.1 ID=mRNA_P-wetherbeei_contig6185.3.1|Name=mRNA_P-wetherbeei_contig6185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig6185:2683..3507+ (Phaeothamnion wetherbeei SAG_119_79)
TCAATGGCAGATATAAATGATACAACAGTGCTGGAGCCGCCGCGCGTTTA TCTGGTTCATATGGTTGTGTTCACGCTGGTTGTCGTCGTTCTGACGGCCA TTCTTTTCCCCAATATCAAGGCGGCGTTTTTGGCCAATGTGGGCCTCAAT GGCCTGATCGTCGGCATTCTCCTGCTTGGCGTTGCTTATGCCTACCGCAT GGTTTGGCGGCTGTTTCCGGAAATCAACTGGGTCAACGGCTTCCGCGTCG GGCAATCGAGCGATGAAAACCTGGCGGAACCGGTTTTGCTGGCGCCCATG GCCACCCTTCTGGGGGACCGGCAGGAGCGCACGGTGCTTTCCACCAACAC CATGCGTTCGCTGCTCGACTCGCTGGCCTCGCGGCTGGACGAATCGCGCG ATCTCATGCGCTATCTGGTCAGCCTGCTGATCTTTTTGGGACTGCTCGGA ACATTCTGGGGCCTGCTGCAAACGGTTACCTCGGTGGGTGACGCCATCAA GAACCTGGATGTGGGCTCAGGCCAATCAAGCTCCATGTTCGAGGAATTGA AATCCGGCTTGCAGCGGCCGCTTGAGGGCATGGGACTTTCGTTTTCAGCC AGCCTGTTCGGGCTTGCCGGTTCCCTGATCCTTGGTTTTCTCGATTTGAA GGCAAGCCAGGCGCAGAACCGGTTCTATCACAATCTGGAAGACTGGCTTT CAACCATCACCGACATTCAGGTGGGCGAGGGCGGCAATCAGTCCGGGGCC AACAATTACCTGCGCTTTGACATGCAGGGATTGCAGCGCGGCCTGGACAA GGTTGGCAAGCAGCTTGAGGGCGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6185:2683..3507+

>mRNA_P-wetherbeei_contig6185.3.1 ID=mRNA_P-wetherbeei_contig6185.3.1|Name=mRNA_P-wetherbeei_contig6185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig6185:2683..3507+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGATATAAATGATACAACAGTGCTGGAGCCGCCGCGCGTTTATCT
GGTTCATATGGTTGTGTTCACGCTGGTTGTCGTCGTTCTGACGGCCATTC
TTTTCCCCAATATCAAGGCGGCGTTTTTGGCCAATGTGGGCCTCAATGGC
CTGATCGTCGGCATTCTCCTGCTTGGCGTTGCTTATGCCTACCGCATGGT
TTGGCGGCTGTTTCCGGAAATCAACTGGGTCAACGGCTTCCGCGTCGGGC
AATCGAGCGATGAAAACCTGGCGGAACCGGTTTTGCTGGCGCCCATGGCC
ACCCTTCTGGGGGACCGGCAGGAGCGCACGGTGCTTTCCACCAACACCAT
GCGTTCGCTGCTCGACTCGCTGGCCTCGCGGCTGGACGAATCGCGCGATC
TCATGCGCTATCTGGTCAGCCTGCTGATCTTTTTGGGACTGCTCGGAACA
TTCTGGGGCCTGCTGCAAACGGTTACCTCGGTGGGTGACGCCATCAAGAA
CCTGGATGTGGGCTCAGGCCAATCAAGCTCCATGTTCGAGGAATTGAAAT
CCGGCTTGCAGCGGCCGCTTGAGGGCATGGGACTTTCGTTTTCAGCCAGC
CTGTTCGGGCTTGCCGGTTCCCTGATCCTTGGTTTTCTCGATTTGAAGGC
AAGCCAGGCGCAGAACCGGTTCTATCACAATCTGGAAGACTGGCTTTCAA
CCATCACCGACATTCAGGTGGGCGAGGGCGGCAATCAGTCCGGGGCCAAC
AATTACCTGCGCTTTGACATGCAGGGATTGCAGCGCGGCCTGGACAAGGT
TGGCAAGCAGCTTGAGGGCGCA
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