mRNA_P-wetherbeei_contig6164.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521VDM5_9PROT (Lipid A export permease/ATP-binding protein MsbA n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VDM5_9PROT) HSP 1 Score: 710 bits (1832), Expect = 2.180e-246 Identity = 368/500 (73.60%), Postives = 438/500 (87.60%), Query Frame = 1
Query: 1 VAAYCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 1500
V++Y AWV NRV+LDLRAAMF+R++RLP FFD+ SSG L+S+IAYDV GVT+AATSV+TV+V+DS+AVIGLL WL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG L VLQETIEC +VVK+FGGQDYEA RF +ANQ LRG+NMRQT+PAA TVP+TQILA+ ALAIIIYI L +S+A RAT+GEF SF+TAMLMLL+PLK LT+++APLQRGLAAAESVFGLID P+E DRG++ L+RA+G V +E VSFTYATR+E AL+ + F+V PGETVALVG SGGGKTTL NL+PRFY+P+ GRI LDG D+QDLTL+SLRGNIALVSQ+VVLFND+I ANIAYGR++G + ++AAAEAAHAM+FI TP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQAALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG I ESG H +LLA G YA+LY Q+A+Q
Sbjct: 84 VSSYLLAWVGNRVILDLRAAMFERLVRLPTRFFDDHSSGVLLSRIAYDVGGVTSAATSVLTVVVKDSIAVIGLLGWLFYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGELVQVLQETIECQRVVKIFGGQDYEARRFARANQTLRGYNMRQTIPAAATVPMTQILASFALAIIIYIALEDSLASRATVGEFASFITAMLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPIEEDRGTLRLERARGEVRYEDVSFTYATRSEAALSGVSFAVRPGETVALVGPSGGGKTTLVNLLPRFYSPAGGRILLDGQDIQDLTLESLRGNIALVSQEVVLFNDSIRANIAYGRMSGVSEAEVIAAAEAAHAMEFIGATPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERAVQAALEVLMRGRTTIVIAHRLSTIERADRIVVLERGGIAESGTHAELLAREGLYAKLYRIQFASQ 583
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4EXY1_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EXY1_9PROT) HSP 1 Score: 709 bits (1830), Expect = 8.320e-246 Identity = 362/504 (71.83%), Postives = 436/504 (86.51%), Query Frame = 1
Query: 1 VAAYCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARP 1512
V++Y AWV+NRVVLDLRAAMF R++R PA FFD+ SSG L+SK+AYDV GV AAAT+V+T+ ++D++AV GLLAWL+YINWKLTL+ALAVGP ++ V+L S+RLR+M+RGAQ AMG L+HVL+E+IECH+VVKVFGGQDYE+ RF +ANQ LRGFNMRQTVPAALT P+T LAA AL++I+YI L+ES+A RAT+GEF SF+TAMLMLL+PLK LTEL+APLQRGLAAAESVF +ID PVE DRG++VL RA+G V +E V+FTY+TR EPAL + V PGETVALVGGSGGGKTTL NL+PRFYAP +GRI LDG+D+Q LTL+SLR NIALVSQD+VLFND+I ANIAYGR+ G ++AAAEAAHA+ FIR+TP+GL+T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATS+LD+ESERQVQAALE LM+GR T+VIAHRLST+E ADRI+VLERG I+ESGRH +LLA GG YARLY Q+ A+ P
Sbjct: 85 VSSYFLAWVANRVVLDLRAAMFARLVRFPAKFFDDHSSGVLLSKVAYDVGGVMAAATTVLTIAIKDTIAVAGLLAWLLYINWKLTLIALAVGPPIAWAVRLLSRRLRSMARGAQHAMGELAHVLEESIECHRVVKVFGGQDYESGRFARANQLLRGFNMRQTVPAALTTPITYTLAAAALSVIVYIALQESLANRATVGEFASFITAMLMLLAPLKRLTELNAPLQRGLAAAESVFEMIDTPVEEDRGTIVLPRARGEVVYENVAFTYSTRTEPALAGVSLQVRPGETVALVGGSGGGKTTLVNLLPRFYAPGAGRILLDGHDIQTLTLESLRANIALVSQDIVLFNDSIYANIAYGRMGGAAAREVIAAAEAAHAIGFIRETPEGLNTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSSLDTESERQVQAALETLMRGRATIVIAHRLSTVERADRIVVLERGRIMESGRHAELLARGGVYARLYHLQFTAEAVSP 588
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F3YHA4_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YHA4_9PROT) HSP 1 Score: 706 bits (1822), Expect = 2.590e-245 Identity = 369/500 (73.80%), Postives = 432/500 (86.40%), Query Frame = 1
Query: 10 YCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEAR 1509
Y AWV +RVVLDLRAAMF R++RLPA FFD+ SSGA++SK+AYDV GVT+AAT+V+T V+DS+ VIGLL WL+Y+NWKLTL+ALAVGP ++L V+L S RLR+M+R AQ AMG+L HVL+ETIECHKVVKVFGGQ+YEA RFE+ANQ+LRGF MRQTVPAALT PVT LAA+ALAII+YI L ES+A RAT+GEF SF+TAMLMLLSPLKHLTE++APLQRGLAAAESVF LID P E D+G+ L RA+G + F+ VS TY TR EPAL+++ F++ PGETVALVGGSGGGKTTLANL+PRFYAP SGRI LDG+DLQ L L+SLR N+ALVSQDVVLFND+I ANIAYGR+ + + AAAEAAHAM+FIR+TPQGL+T+IGENGMRLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ ALE LM+GRTTLVIAHRLSTIE ADRI+VLERG I E+G HV+L+A GG YARLY Q+A + A+
Sbjct: 56 YFLAWVGSRVVLDLRAAMFARLVRLPARFFDDHSSGAVLSKVAYDVGGVTSAATTVLTAAVQDSIRVIGLLGWLLYLNWKLTLIALAVGPPIALFVRLLSGRLRSMAREAQHAMGDLVHVLEETIECHKVVKVFGGQEYEARRFERANQRLRGFAMRQTVPAALTTPVTHFLAALALAIIVYIALEESLAARATLGEFASFMTAMLMLLSPLKHLTEINAPLQRGLAAAESVFELIDTPAEEDKGAGQLARARGEIEFQSVSLTYPTRTEPALSSVSFALRPGETVALVGGSGGGKTTLANLLPRFYAPDSGRILLDGHDLQTLKLESLRANLALVSQDVVLFNDSIRANIAYGRMGAASDREVTAAAEAAHAMEFIRETPQGLETLIGENGMRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQQALETLMRGRTTLVIAHRLSTIERADRIVVLERGRIAETGTHVELIARGGVYARLYQMQFATENAK 555
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F3Z8K6_9PROT (Lipid A export permease/ATP-binding protein MsbA (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z8K6_9PROT) HSP 1 Score: 700 bits (1806), Expect = 8.160e-243 Identity = 367/513 (71.54%), Postives = 439/513 (85.58%), Query Frame = 1
Query: 1 VAAYCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARPAAE*GGCRS 1539
V++Y AWVSNRVVLDLR AMF R++R+P FFD+ SSGAL+SK+AYDV GVT+AAT+V++V V+DS+AV+ LLAWL ++NWKLTL+ALA PL++L V+LFS+RLR M+R AQ AMG+L HVL+ETIECHKVVKVFGG +YE RF +ANQ+LRGF+MRQTVPAA TVP+TQILA+ ALAII+YI L +S+A R T+GEFVSFVTAMLML +PLK LT+++APLQRGLAAAESVFGLID PVE DRG+V L+RA+G V +E VSFTY TR E AL+ + +V PGETVALVG SGGGKTTL NL+PRFYAP++GRI LDG D+QDL L+SLRGN+ALVSQDVVLFNDTI ANIAYG+L G + + +VAAAEAAHA++FIR+T GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ+ALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG+I E+G H +LLA G YARL+ Q+A Q A PA G R+
Sbjct: 36 VSSYFLAWVSNRVVLDLRDAMFARLVRMPTRFFDDHSSGALLSKVAYDVNGVTSAATTVLSVAVKDSVAVLALLAWLFFLNWKLTLIALAAAPLIALAVRLFSRRLRRMAREAQHAMGDLVHVLEETIECHKVVKVFGGHEYEMGRFGRANQRLRGFSMRQTVPAAATVPITQILASTALAIIVYIALEDSLASRTTVGEFVSFVTAMLMLFAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTVRLERARGEVRYENVSFTYPTRTEAALSGVTLAVRPGETVALVGPSGGGKTTLVNLLPRFYAPTAGRILLDGYDIQDLGLESLRGNVALVSQDVVLFNDTIRANIAYGKLGGVSEQEVVAAAEAAHAIEFIRETQDGLQTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQSALEVLMRGRTTIVIAHRLSTIERADRIVVLERGKIAETGSHAELLARDGIYARLHRIQFATQAAGPAPPPGSARA 548
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A537D9W3_9PROT (Lipid A export permease/ATP-binding protein MsbA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D9W3_9PROT) HSP 1 Score: 699 bits (1805), Expect = 3.630e-242 Identity = 357/495 (72.12%), Postives = 432/495 (87.27%), Query Frame = 1
Query: 10 YCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYA 1494
Y AWV+NRVVLDLRAAMF R++RLP FFD+ SSG L+SKIAYDV GVT AATSV+TV V+DS+AV GLL WL Y+NWKLTL+ALAVGPL++ V+L S+RLR M+R AQ +MG+L+HVL+ETIECH+VVKVFGGQ+YE+ RFE+ANQ +RGFNMRQT+ A+LT P+T +LA++ALA+I+Y+ + +S+A R T+GEF SF+TAMLMLL+PLKHLTE+ APLQRGLAAAESVFG+ID PVE DRG+VVL RA+G + +ERV FTY TR+EPAL +I+ + PGETVALVGGSGGGKTTL NL+PRFYAP++GRI LDG+DLQ+LTL SLR NIALVSQD+VLFND+I ANIAYGRL G + + ++AAAEAAHAM FIR+TP+GL T+IGE+G+RLSGGQRQRLAIARALLK+APVLILDEATS+LD+ESER VQAAL+ LM+GRTT+VIAHRLST+E ADRI+VLERG IVE GRH +LLA G YARLY Q+A
Sbjct: 84 YFLAWVANRVVLDLRAAMFSRLVRLPTRFFDDNSSGVLLSKIAYDVMGVTMAATSVITVAVKDSIAVAGLLGWLFYLNWKLTLIALAVGPLIAWSVRLVSRRLRRMAREAQRSMGDLAHVLEETIECHRVVKVFGGQEYESRRFERANQAVRGFNMRQTIAASLTNPITHVLASVALAVIVYLAMEQSLAARTTVGEFASFLTAMLMLLAPLKHLTEIQAPLQRGLAAAESVFGMIDTPVEEDRGTVVLPRARGELAYERVGFTYPTRDEPALADINLQIRPGETVALVGGSGGGKTTLVNLLPRFYAPTTGRILLDGHDLQELTLASLRANIALVSQDIVLFNDSIYANIAYGRLRGASEKEVIAAAEAAHAMSFIRETPEGLGTLIGESGVRLSGGQRQRLAIARALLKNAPVLILDEATSSLDTESERHVQAALDALMRGRTTIVIAHRLSTVERADRIVVLERGRIVEIGRHAELLAKRGIYARLYELQFA 578
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4EYU6_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EYU6_9PROT) HSP 1 Score: 696 bits (1797), Expect = 4.270e-241 Identity = 358/497 (72.03%), Postives = 428/497 (86.12%), Query Frame = 1
Query: 10 YCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 1500
Y AWV NRV+LDLRAAMF R++RLP FFD+ SSG L+S+IAYDV GVT+AAT+V+T++V+DS+AVIGLLAWL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG+L VL ETIEC +VVK+FGGQDYE RFE+ANQ+LRGFNMRQT+PAA TVP+TQ LAA LAII+YI L ES++ R T+GEF SF+TAMLMLL+PLK LT+++APLQRGLAAAESVFGLID PVE DRG++ L+RA+G + + VSFTY TR+EPAL+ + ++ PGETVALVGGSGGGKTTL NL+PRFY P+ GRI LDGND+Q L L+SLRGN+ALVSQDVVLFND+I ANIAYGR+ + ++AAAEAAHAM+FIR TP+GL T+IGENG+RLSGGQRQRLAIARALLKDAPVLILDEATSALDSESER VQ+ALEVLM+GRTT+VIAHRLSTIE ADRI+VLERG I E+G H LLA G YA+LY Q+A++
Sbjct: 87 YFMAWVGNRVILDLRAAMFARLLRLPNRFFDDHSSGVLLSRIAYDVGGVTSAATTVLTIVVKDSIAVIGLLAWLCYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGDLVQVLDETIECQRVVKIFGGQDYEMRRFERANQKLRGFNMRQTIPAAATVPITQFLAAGVLAIIVYIALEESLSSRTTVGEFASFITAMLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTLRLERARGAIDCQNVSFTYPTRDEPALSGVSLAIRPGETVALVGGSGGGKTTLVNLLPRFYVPTGGRILLDGNDIQGLALESLRGNLALVSQDVVLFNDSIRANIAYGRMGSASEAEVIAAAEAAHAMEFIRGTPEGLGTLIGENGLRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERLVQSALEVLMRGRTTIVIAHRLSTIERADRIVVLERGRIAETGTHAQLLAREGVYAKLYRIQFASE 583
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521VQ12_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VQ12_9PROT) HSP 1 Score: 694 bits (1791), Expect = 3.440e-240 Identity = 362/497 (72.84%), Postives = 427/497 (85.92%), Query Frame = 1
Query: 4 AAYCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYA 1494
A+Y AWV NRVVLDLRAAMF R++RLP FFD+ SSG L+S+IAYDV GVT+AATSV+TV+V+DS+AVIGLL WL Y+NWKLTL+ALAVGP ++LVV+LFS+RLR M+R AQ AMG+L HVL+ETIEC +VVK+FGGQ+YEA RFE ANQ+LRGFNMRQT+ A+ TVP+TQILA+ ALAII+YI L ES++ T+GEF SF+TA LMLL+PLK LT+++APLQRGLAAAESVFGLID PVE DRG+V L RA+G + FE VSFTY TR EPAL + +V PGETVALVG SGGGK+TL NL+PRFYAPSSGRI LDG D+Q LTL+SLRGNIALVSQDVVLFND+I ANIAYGR++G ++AAA+AAHAM+FIR TP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ+ALE LM+GR+T+VIAHRLSTIE ADRI+VLERG + E G H +LLA G YARLY Q+A
Sbjct: 85 ASYLVAWVGNRVVLDLRAAMFARLVRLPTRFFDDHSSGVLLSRIAYDVGGVTSAATSVLTVVVKDSIAVIGLLGWLFYLNWKLTLIALAVGPAIALVVRLFSRRLRRMAREAQHAMGDLVHVLEETIECQRVVKIFGGQEYEAGRFEHANQKLRGFNMRQTIAASATVPMTQILASAALAIIVYIALEESLSSGTTVGEFTSFITATLMLLAPLKRLTDVNAPLQRGLAAAESVFGLIDAPVEEDRGTVQLARARGDIAFEDVSFTYPTRTEPALAGVSLTVRPGETVALVGTSGGGKSTLINLLPRFYAPSSGRILLDGRDIQGLTLESLRGNIALVSQDVVLFNDSIRANIAYGRMSGAAEADVIAAAQAAHAMEFIRATPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERAVQSALEELMRGRSTIVIAHRLSTIERADRIVVLERGRVAECGTHAELLAREGVYARLYRIQFA 581
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A1F4B136_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B136_9PROT) HSP 1 Score: 693 bits (1789), Expect = 6.910e-240 Identity = 362/497 (72.84%), Postives = 426/497 (85.71%), Query Frame = 1
Query: 10 YCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQ 1500
Y +WV NRVVLDLRAAMF R+IR+P FFD+ SSG L+S+IAYDV GVTAAAT+V+TV VRDS+AV+GLL WL Y+NWKLTL+AL VGP ++LVV+LFSKRLR M+R +Q AMG+L HVL+ETIEC +VVKVFGGQ+YEA RFE+ANQ+LRGFNMRQTVPAA TVP+TQ+LAA+ALAII+YI L ESI+ R T+GEF SF+TA LMLL+PLK LT+++APLQRGLAAAESVFG+ID PVE DRG+ ++RA+G + ++ VSFTY TR AL + V PGETVALVG SGGGKTTL NL+PRFYAPS GRI LDG+DLQDL L+SLR NIALVSQDVVLFND+I ANIAYGR++G + ++AAAEAAHAM++IRQTP+GL T+IGENG+RLSGGQRQRLAIARALLK+APVLILDEATS+LDSESER VQAALEVLM+GRTT+VIAHRLSTIE ADRI VL G IVESG H +LLA G YARLY Q+A +
Sbjct: 87 YLVSWVGNRVVLDLRAAMFARLIRMPTRFFDDHSSGVLLSRIAYDVGGVTAAATTVLTVAVRDSIAVLGLLGWLFYLNWKLTLIALLVGPAIALVVRLFSKRLRRMARESQHAMGDLVHVLEETIECQRVVKVFGGQEYEARRFERANQKLRGFNMRQTVPAAATVPITQMLAAVALAIIVYIALEESISNRTTVGEFASFITATLMLLAPLKRLTDVNAPLQRGLAAAESVFGMIDSPVEEDRGTRRIERARGGIVYDDVSFTYPTRTAAALAGVSLEVHPGETVALVGPSGGGKTTLVNLLPRFYAPSGGRILLDGHDLQDLALESLRANIALVSQDVVLFNDSIRANIAYGRMSGASEAEVIAAAEAAHAMEYIRQTPEGLGTLIGENGLRLSGGQRQRLAIARALLKNAPVLILDEATSSLDSESERLVQAALEVLMRGRTTIVIAHRLSTIERADRIAVLASGRIVESGTHAELLAREGLYARLYRIQFATE 583
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: UPI0019CBA76D (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019CBA76D) HSP 1 Score: 694 bits (1790), Expect = 8.620e-240 Identity = 362/502 (72.11%), Postives = 426/502 (84.86%), Query Frame = 1
Query: 10 YCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEARPA 1515
Y AWV+NRVVLDLRAAMF R++R+PA FFD+ SSG+++SK+AYDV GVTAAAT+V+TV V+D++A+IGLLAWL Y+NWKLTLVALAVGPL++L V+L S+RLR+M+R AQ +MG+L HVL+ETIECHKVVK+FGGQ YEA RF++ANQ+LRGFNMRQTVPAALT PVT ILA+ ALAII+Y+ + +S+A R T+GEF SF TAML+LL+PLKHLTE++APLQRGLAAAESVF LID PVE D G + + RA+G + F+ V TYATR EPAL + F+V PGETVALVGGSGGGKTTL NL+PRFY+P SGRI LDG DLQ L L+SLR N+ALVSQDVVLFNDTI ANIAYG + + AA+AAHAMDFIR+ PQGLDT+IGENGMRLSGGQRQRLAIARALLK+APVLILDEATSALDSESER VQ ALE LM+GRTT+VIAHRLSTIE ADRI+VLERG + E G H +LLA GG YARLY QYAA+ + A
Sbjct: 98 YFLAWVANRVVLDLRAAMFARLVRMPARFFDDHSSGSVLSKVAYDVGGVTAAATTVLTVAVKDTIAIIGLLAWLFYLNWKLTLVALAVGPLIALFVRLLSRRLRSMAREAQHSMGDLVHVLEETIECHKVVKIFGGQAYEARRFQRANQRLRGFNMRQTVPAALTTPVTHILASTALAIILYLAMEDSLAGRITVGEFASFFTAMLLLLAPLKHLTEINAPLQRGLAAAESVFELIDAPVEEDAGRLEIARARGQIEFQAVCLTYATRIEPALAGVSFAVQPGETVALVGGSGGGKTTLVNLLPRFYSPQSGRILLDGIDLQALKLESLRANLALVSQDVVLFNDTIRANIAYGAMGAAGEREVTEAAQAAHAMDFIREMPQGLDTLIGENGMRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERLVQDALETLMRGRTTIVIAHRLSTIERADRIVVLERGLVAEEGTHDELLARGGIYARLYRIQYAAEHVKDA 599
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Match: A0A521Z5Q4_9PROT (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z5Q4_9PROT) HSP 1 Score: 675 bits (1742), Expect = 6.570e-233 Identity = 346/502 (68.92%), Postives = 424/502 (84.46%), Query Frame = 1
Query: 1 VAAYCSAWVSNRVVLDLRAAMFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVIGLLAWLMYINWKLTLVALAVGPLVSLVVKLFSKRLRAMSRGAQEAMGNLSHVLQETIECHKVVKVFGGQDYEAARFEKANQQLRGFNMRQTVPAALTVPVTQILAAMALAIIIYIGLRESIAQRATIGEFVSFVTAMLMLLSPLKHLTELSAPLQRGLAAAESVFGLIDEPVEADRGSVVLKRAQGHVTFERVSFTYATRNEPALNNIDFSVAPGETVALVGGSGGGKTTLANLMPRFYAPSSGRITLDGNDLQDLTLDSLRGNIALVSQDVVLFNDTIAANIAYGRLAGTNREAIVAAAEAAHAMDFIRQTPQGLDTMIGENGMRLSGGQRQRLAIARALLKDAPVLILDEATSALDSESERQVQAALEVLMQGRTTLVIAHRLSTIEHADRILVLERGEIVESGRHVDLLAAGGTYARLYTTQYAAQEA 1506
V+++C WV +R+VLDLR AMF +++R PA +FD++SSG L+S++AYDV+GV +AT+V+TV V+DS+AVIGLL WL Y++W+LTL+ALAVGPL++L VKL SKRLR M+R AQ AMG + HVL+E+I+ HKVVK+FGGQDYEA RF +A Q LRG++MRQ VP ALT PVT LAA+ALAII+YI +R S+ RAT+G+F SF+TAMLMLL+P+K LTE++ PLQRGLAAAESVFG+ID PVE DRG+V L RA+G V +E ++F Y TR EPAL NID + PGETVALVGGSGGGKTTL NL+PRFY P++GR+ LDG+D+Q LTL SLR NIALVSQD+VLFND+I ANIAYG + G + ++AAAEAAHAM FIR+ P+GL+T IGE+G+RLSGGQRQRLAIARALLK+APVLILDEATSALDSESERQVQAAL+ LM+GRTT+VIAHRLSTIEHADRI+VLERG IVE GRH +LLA G YARLY Q+ A+ A
Sbjct: 73 VSSWCLQWVGHRLVLDLRNAMFAKLVRFPARYFDDQSSGVLLSRVAYDVSGVAGSATTVLTVTVKDSVAVIGLLGWLFYLSWQLTLIALAVGPLIALFVKLLSKRLRRMAREAQHAMGGIVHVLEESIQAHKVVKIFGGQDYEAGRFARATQLLRGYHMRQAVPEALTTPVTHTLAAVALAIIVYIAMRASLEDRATVGQFASFITAMLMLLAPIKRLTEINGPLQRGLAAAESVFGMIDNPVEEDRGTVKLPRARGEVAYENLTFVYPTRTEPALQNIDLHIRPGETVALVGGSGGGKTTLVNLLPRFYTPTAGRVLLDGHDIQTLTLQSLRANIALVSQDIVLFNDSIYANIAYGTMNGAAEKEVIAAAEAAHAMTFIRELPEGLNTPIGESGVRLSGGQRQRLAIARALLKNAPVLILDEATSALDSESERQVQAALDTLMRGRTTIVIAHRLSTIEHADRIVVLERGRIVEIGRHAELLAKEGAYARLYRMQFDAERA 574 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6164.1.1 >prot_P-wetherbeei_contig6164.1.1 ID=prot_P-wetherbeei_contig6164.1.1|Name=mRNA_P-wetherbeei_contig6164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=488bp MFDRMIRLPAAFFDERSSGALMSKIAYDVAGVTAAATSVVTVLVRDSLAVback to top mRNA from alignment at P-wetherbeei_contig6164:1..2630+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6164.1.1 ID=mRNA_P-wetherbeei_contig6164.1.1|Name=mRNA_P-wetherbeei_contig6164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2630bp|location=Sequence derived from alignment at P-wetherbeei_contig6164:1..2630+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6164:1..2630+ >mRNA_P-wetherbeei_contig6164.1.1 ID=mRNA_P-wetherbeei_contig6164.1.1|Name=mRNA_P-wetherbeei_contig6164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1464bp|location=Sequence derived from alignment at P-wetherbeei_contig6164:1..2630+ (Phaeothamnion wetherbeei SAG_119_79)back to top |