mRNA_P-wetherbeei_contig615.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Match: A0A508BCE5_9GAMM (Uncharacterized protein n=2 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A508BCE5_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 6.750e-7 Identity = 55/149 (36.91%), Postives = 72/149 (48.32%), Query Frame = 1
Query: 4 LIIAASLGYEGILQDLLAGGASTDSRDARRATALHWAC-----ADDHVACCRALIAAGADVTAGTE--RSPLHEAAAGGHLLAVKE-------LLKSGAAVDVRDGAGRSPLHAAAGCADGSAGVVRALLAAGADPAAGTRSGETPLHV 408
L +A G+EG ++ L G + + D +H+A A V R LI GAD+ A + R+ LHEA G K LLK+ AVD++D GR+P+ AA A VVRALLAAGADP R G P+ V
Sbjct: 77 LHLACERGHEGAVRLLCHAGVAVNGSDIEGRRPIHYAIGPEVSASQSVQVLRVLIEYGADINARNKSGRTALHEAMFSGSSFWHKPVDEKVACLLKARCAVDIQDKQGRTPMFLAAVTAHHR--VVRALLAAGADPELADRDGYRPVDV 223
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Match: R1DTG2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DTG2_EMIHU) HSP 1 Score: 57.0 bits (136), Expect = 8.680e-7 Identity = 58/146 (39.73%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 4 LIIAASLGYEGILQDLLAGGASTDSRDARRATALHWACADDHVACCRALIAAGA------------DVTAGTERSPLHEAAA---GGHLLAVKELLKSGAAVDVR--DGAGRSPLHAAAGCADGSAGVVRALLAAGADPAAGTRSG 390
L + A G G +++LLAGGA D+ D TALH AC + L+ AGA D R+ H AAA + A+ ELL++ R D AGR+PLH AA A GSA V+ALLAAGA PAA + G
Sbjct: 121 LAVLAGDGSPGCMRELLAGGAKVDAPDTNGVTALHAACGLNQPQLTSLLLDAGATPEARGAHGASPDARDERLRTACHAAAARDASEAIEALHELLRAAPPSAARQPDLAGRTPLHFAA--ASGSAPCVKALLAAGAAPAAASAIG 264
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Match: A0A0D2VWE6_CAPO3 (Glycerophosphocholine phosphodiesterase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VWE6_CAPO3) HSP 1 Score: 56.6 bits (135), Expect = 1.350e-6 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 1 PLIIAASLGYEGILQDLLAGGASTDSRDARRATALHWACADDHVACCRALIAAGADVTAG---TERSPLHEAAAGGHLLAVKELLKSGAAVDVRDGAGRSPL 297
PL+++ G+ + L+ GA ++ D TALH AC+++ V C L+ A V + R+PL +AA GGHL V++LL +GA VRD G PL
Sbjct: 281 PLLLSCRFGFFDVANRLICAGADPNATDEAGETALHAACSENAVECVELLLKHQAQVDVRDVYSSRTPLFDAAIGGHLSCVEKLLAAGAKALVRDVDGWRPL 382
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Match: UPI001F3E99A2 (ankyrin repeat domain-containing protein n=1 Tax=Streptomyces sp. JJ36 TaxID=2736645 RepID=UPI001F3E99A2) HSP 1 Score: 53.5 bits (127), Expect = 1.420e-5 Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 13 AASLGYEGILQDLLAGGASTDSRDARRATALHWACADDHVACCRALIAAGADVTA-----------GTER----SPLHEAAAGGHLLAVKELLKSGAAVDVRDGAGRSPLHAAAGCADGSAGVVRALLAAGADPAAGTRSGETPL 402
AA G+ ++++L+ GA D+ D T L A + H R L+ AGAD A GTE S L A GG + V LL +GA D+ + L AA C +GSAG+VR LL AGADP TPL
Sbjct: 238 AAFHGHTAVVEELVRRGAPVDAVDQYGVTPLAQAASSGHPEAVRVLLRAGADPAARWRSTPVVCADGTEVVSEWSVLRSAVRGGRVEIVDLLLAAGAGSDLD-----AALEAA--CVEGSAGIVRRLLDAGADPEGPAGEARTPL 375
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Match: A0A8C7PPN7_ONCMY (Ankyrin repeat and SOCS box containing 5a n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7PPN7_ONCMY) HSP 1 Score: 50.4 bits (119), Expect = 9.700e-5 Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 1 PLIIAASLGYEGILQDLLAGGASTDSRDARRATALHWACADDHVACCRALIAAGADVTAGTERSPLHEAAAGGHLLAVKELLKSGAAVDVRDGAGRSPLHAA 306
PL AA G L++L+ G + + + LH AC DHVAC RALIAAGA+V+ E SPLH AA VK LL GA + R+ + P+ AA
Sbjct: 54 PLHDAACQGRLLALRNLILQGHNVNVVTIDHVSPLHVACLGDHVACARALIAAGANVSRYME-SPLHAAAEKDCTAIVKLLLDFGADIHARNIEFQRPVEAA 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig615.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig615.4.1 >prot_P-wetherbeei_contig615.4.1 ID=prot_P-wetherbeei_contig615.4.1|Name=mRNA_P-wetherbeei_contig615.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp PLIIAASLGYEGILQDLLAGGASTDSRDARRATALHWACADDHVACCRALback to top mRNA from alignment at P-wetherbeei_contig615:8313..8951- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig615.4.1 ID=mRNA_P-wetherbeei_contig615.4.1|Name=mRNA_P-wetherbeei_contig615.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig615:8313..8951- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig615:8313..8951- >mRNA_P-wetherbeei_contig615.4.1 ID=mRNA_P-wetherbeei_contig615.4.1|Name=mRNA_P-wetherbeei_contig615.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig615:8313..8951- (Phaeothamnion wetherbeei SAG_119_79)back to top |