mRNA_P-wetherbeei_contig6139.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6139.2.1
Unique NamemRNA_P-wetherbeei_contig6139.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A3S0CWX9_9RHOO (Multidrug transporter subunit MdtC (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A3S0CWX9_9RHOO)

HSP 1 Score: 442 bits (1137), Expect = 6.510e-150
Identity = 233/291 (80.07%), Postives = 265/291 (91.07%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            DN LYNA+GQRL+STIFTQ++QYRVVLEVKPEFR  PAA+ +LYVP + G QVPLSAV R+VE+P+ LA+NH GQFP+ T+SFNLA G SLG AV+AI + + +L +P S+ T+FQGAA AF+ASL NTLLLILAA++TMYIVLGVLYESYIHPVTILSTLPSAGVGALLAL+VARS+LGI+GIIGI+LLIGIVKKNAIMMIDFALDAER EG  PREAIYQACLLRFRPILMTT++ALLGALPLMLG GVGSELRHPLG+TMVGGL+VSQ+LTLFTTPVIYLAFDRLARR
Sbjct:  324 DNALYNAYGQRLVSTIFTQATQYRVVLEVKPEFRSSPAAIANLYVPGTGGAQVPLSAVARVVERPAMLAVNHIGQFPAVTLSFNLAPGASLGAAVEAIRSAEAELGLPASIETSFQGAALAFQASLTNTLLLILAAVVTMYIVLGVLYESYIHPVTILSTLPSAGVGALLALLVARSELGIVGIIGIVLLIGIVKKNAIMMIDFALDAERREGLEPREAIYQACLLRFRPILMTTLAALLGALPLMLGSGVGSELRHPLGVTMVGGLLVSQVLTLFTTPVIYLAFDRLARR 614          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A537D1N4_9PROT (Multidrug transporter subunit MdtC (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D1N4_9PROT)

HSP 1 Score: 435 bits (1118), Expect = 4.230e-149
Identity = 239/292 (81.85%), Postives = 259/292 (88.70%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARRV 876
            D  LYNAFGQRLISTIFTQSSQYRVVLEVKPEFR+GP AL D+YV SS+G QVPLSA+TR+ EKP+ LA+NH GQFP+AT+SFNLA G SLGDAV+AIEA   DL  P SVRT FQGAA AFRASL N LLLILAAI+TMYIVLGVLYESYIHP+TILSTLPSAG GAL+AL+V R DLGII +IGIILLIGIVKKNAIMMIDFALDAER +G +PR+AIY ACLLRFRPILMTT+SALLGALPL LG GVGSELRHPLGITMVGGLI+SQ LTLFTTPVIYL FDRL RRV
Sbjct:  159 DVALYNAFGQRLISTIFTQSSQYRVVLEVKPEFRRGPDALKDIYVASSSGAQVPLSALTRVTEKPALLAVNHLGQFPAATLSFNLAPGASLGDAVRAIEAQALDL--PASVRTGFQGAALAFRASLANELLLILAAIVTMYIVLGVLYESYIHPLTILSTLPSAGAGALVALMVTRGDLGIIAVIGIILLIGIVKKNAIMMIDFALDAERKDGMNPRDAIYHACLLRFRPILMTTLSALLGALPLALGSGVGSELRHPLGITMVGGLILSQALTLFTTPVIYLWFDRLTRRV 448          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A536SF93_9PROT (Multidrug transporter subunit MdtC (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SF93_9PROT)

HSP 1 Score: 441 bits (1135), Expect = 6.350e-149
Identity = 239/291 (82.13%), Postives = 262/291 (90.03%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            D  LYNAFGQRL+STIFTQS+QYRVVLEVKPEFR+GP AL D+YV SS+G QVPLSA+T + EKP+ LAINH GQFP+ATISFNLA G SLGDAV+AIE+  + L++P S+RT+FQGAA AFRASL N LLLILAAI+TMYIVLGVLYESYIHP+TILSTLPSAGVGALLAL+  RSDLGII +IGIILLIGIVKKNAIMMIDFALDAER +G SPR+AIY ACLLRFRPILMTTMSALLGALPL LG GVGSELRHPLGITMVGGLI+SQ LTLFTTPVIYL FDRLARR
Sbjct:  361 DTALYNAFGQRLVSTIFTQSNQYRVVLEVKPEFRRGPDALKDIYVASSSGAQVPLSAITTVTEKPALLAINHLGQFPAATISFNLAPGASLGDAVRAIESEARSLELPPSLRTSFQGAALAFRASLANELLLILAAIVTMYIVLGVLYESYIHPLTILSTLPSAGVGALLALMFTRSDLGIIAVIGIILLIGIVKKNAIMMIDFALDAERKDGMSPRDAIYHACLLRFRPILMTTMSALLGALPLALGTGVGSELRHPLGITMVGGLILSQALTLFTTPVIYLWFDRLARR 651          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A6C2CT34_9RHOO (MdtB/MuxB family multidrug efflux RND transporter permease subunit n=4 Tax=Zoogloea TaxID=349 RepID=A0A6C2CT34_9RHOO)

HSP 1 Score: 444 bits (1141), Expect = 1.020e-145
Identity = 234/291 (80.41%), Postives = 267/291 (91.75%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            DN LYNA+GQRLISTIFTQ++QYRVVLEVKPEFR  PAA+ +LYVP + G QVPLSAV ++VE+P+ LAINH GQFP+ T+SFNLA G +LGDAV+AI A + DL +P S+ T+FQGAA AF+ASL +TLLLILAA++TMYIVLGVLYESYIHPVTILSTLPSAGVGALLAL++ARS+LGI+GIIGI+LLIGIVKKNAIMMIDFALDAER EG +PREAI+QACLLRFRPILMTT++ALLGALPLMLG GVGSELRHPLGITMVGGL+VSQ+LTLFTTPVIYLAFDRLARR
Sbjct:  729 DNALYNAYGQRLISTIFTQATQYRVVLEVKPEFRSSPAAIANLYVPGTGGAQVPLSAVAKVVERPTMLAINHVGQFPAVTVSFNLAQGAALGDAVEAIRAAEADLGLPASIETSFQGAALAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPVTILSTLPSAGVGALLALLLARSELGIVGIIGIVLLIGIVKKNAIMMIDFALDAERNEGLAPREAIFQACLLRFRPILMTTLAALLGALPLMLGTGVGSELRHPLGITMVGGLLVSQVLTLFTTPVIYLAFDRLARR 1019          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: UPI00199B2364 (Efflux RND transporter permease subunit n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI00199B2364)

HSP 1 Score: 421 bits (1081), Expect = 1.360e-145
Identity = 225/292 (77.05%), Postives = 257/292 (88.01%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARRV 876
            DN LYN+FGQRL+STIFTQ+SQYRVVLEVKPEFR+GP AL D++VP + G+QVPLS+V  + E+  PLA++H GQFP+ TISFNLA G++LG+AVKAIE+ +KD+ +P SVRT FQGAASAFRASL NTLLLILAAI+TMYIVLGVLYESYIHPVTILSTLPSAGVGALL+L++A  DLGII IIGIILLIGIVKKNAI+M+DFALDAER +     EAIYQA LLRFRPILMTTM+A+LGALPLML  GVGSELR PLGI MVGGLI SQLLT+FTTPVIYL FDR A+RV
Sbjct:   20 DNALYNSFGQRLVSTIFTQASQYRVVLEVKPEFRRGPGALNDIFVPGTGGVQVPLSSVASVTERTGPLAVSHLGQFPAQTISFNLAPGYALGEAVKAIESAEKDMALPASVRTNFQGAASAFRASLLNTLLLILAAIVTMYIVLGVLYESYIHPVTILSTLPSAGVGALLSLLIAGQDLGIIAIIGIILLIGIVKKNAILMVDFALDAERDQKLPAHEAIYQAALLRFRPILMTTMAAILGALPLMLSWGVGSELRRPLGIAMVGGLIFSQLLTIFTTPVIYLYFDRAAKRV 311          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A0A1FGD7_9BURK (Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=16 Tax=Collimonas TaxID=202907 RepID=A0A0A1FGD7_9BURK)

HSP 1 Score: 443 bits (1139), Expect = 3.600e-145
Identity = 236/292 (80.82%), Postives = 266/292 (91.10%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARRV 876
            DN LYNAFGQRLISTI+TQS+QYRVV+EVKPEF+KGPAAL  +Y+ +  G QVPLS++  + E+ SPL +NH GQFP+ TISFNLAAG SLG+AVKAI A ++D+ +P S++T+FQGAA AF+ASL NTLLLILAAIITMYIVLGVLYESYIHP+TILSTLPSAGVGALL+L++A SDLGIIGIIGIILLIGIVKKNAIMMIDFALDAER EGKSPR+AIYQACLLRFRPILMTTM+ALLGALPLMLG GVGSELR PLGITMVGGL+VSQ+LTLFTTPVIYLAFD LARRV
Sbjct:  730 DNALYNAFGQRLISTIYTQSNQYRVVMEVKPEFQKGPAALNSIYLVAGNGNQVPLSSIATIEERTSPLVVNHIGQFPATTISFNLAAGASLGNAVKAIHAAEQDIGLPASIQTSFQGAALAFQASLSNTLLLILAAIITMYIVLGVLYESYIHPITILSTLPSAGVGALLSLMIAGSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERNEGKSPRDAIYQACLLRFRPILMTTMAALLGALPLMLGSGVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLAFDNLARRV 1021          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A3S0W2N2_9GAMM (MdtB/MuxB family multidrug efflux RND transporter permease subunit n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0W2N2_9GAMM)

HSP 1 Score: 438 bits (1126), Expect = 2.130e-143
Identity = 235/291 (80.76%), Postives = 263/291 (90.38%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            DN LYNAFGQRL+STIFTQS+QYRVVLEVKP+F++GPAAL  LYV S+ G QVPL A+ R++E+ +PLAINH GQFP+ATISFNLA G SLGDAV AIE  ++ L +P SV+T FQGAA AFRASL NTLLLILAA++TMYIVLGVLYESYIHP+TILSTLPSAG+GALLAL+++  DLGIIGIIGIILLIGIVKKNAI+MIDFALDAER E K+PREAIYQACLLRFRPILMTT++ALLGALPLMLG GVGSELR PLG+TMVGGLIVSQ LTLFTTPVIYLAFDRLARR
Sbjct:  729 DNALYNAFGQRLVSTIFTQSNQYRVVLEVKPDFQRGPAALDRLYVASAAGEQVPLGAIARVIERNAPLAINHLGQFPAATISFNLAPGASLGDAVAAIETAEQQLGLPASVQTNFQGAALAFRASLSNTLLLILAAVVTMYIVLGVLYESYIHPLTILSTLPSAGIGALLALLLSGVDLGIIGIIGIILLIGIVKKNAILMIDFALDAERRECKTPREAIYQACLLRFRPILMTTLAALLGALPLMLGSGVGSELRQPLGLTMVGGLIVSQALTLFTTPVIYLAFDRLARR 1019          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A537CJA8_9PROT (MdtB/MuxB family multidrug efflux RND transporter permease subunit n=10 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CJA8_9PROT)

HSP 1 Score: 434 bits (1115), Expect = 1.000e-141
Identity = 235/291 (80.76%), Postives = 260/291 (89.35%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            D  LYNAFGQRLISTIFTQS+QYRVVLEVKPEFR+GP AL D+YV SS+G QVPLSA+TR+ EKP+ LA+NH GQFP+ATISFNLA G SLG AV+AIEA  + L +P S+RT+FQGAA AFRASL N LLLILAA++TMYIVLGVLYESYIHP+TILSTLPSAGVGALLAL++ RSDL II +IGIILLIGIVKKNAIMMIDFALDAER +G SPR+AIY ACLLRFRPILMTT+SALLGALPL LG G GSELRHPLGITMVGGLI+SQ LTLF+TPVIYL FDRLARR
Sbjct:  729 DIALYNAFGQRLISTIFTQSNQYRVVLEVKPEFRRGPDALKDIYVASSSGAQVPLSALTRVTEKPALLAVNHLGQFPAATISFNLAPGASLGSAVQAIEAEARSLDLPASMRTSFQGAALAFRASLANELLLILAAVVTMYIVLGVLYESYIHPLTILSTLPSAGVGALLALMLTRSDLDIIAVIGIILLIGIVKKNAIMMIDFALDAERKDGMSPRDAIYHACLLRFRPILMTTLSALLGALPLALGTGAGSELRHPLGITMVGGLILSQALTLFSTPVIYLWFDRLARR 1019          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A1G3GZW7_9RHOO (Multidrug transporter subunit MdtC n=1 Tax=Rhodocyclales bacterium GWA2_65_20 TaxID=1802017 RepID=A0A1G3GZW7_9RHOO)

HSP 1 Score: 432 bits (1112), Expect = 2.280e-141
Identity = 235/291 (80.76%), Postives = 259/291 (89.00%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            DN LYNAFGQRLISTIFTQS+ YRVVLEVKPEFR+G AAL  LYV S  G QVPLSAV R++EKP  LA+NH GQFP+ TISFNLA G +LG+AV AI A  + L +P SV T FQGAA AF+ASL NTLLLILAA++TMYIVLGVLYESYIHPVTILSTLPSA VGALLAL++A  DLGII +IGIILLIGIVKKNAIMMIDFALDAER++GKSPR+AI++ACLLRFRPILMTT+SALLGALPLMLG GVGSELRHPLGITMVGGL+VSQ+LTLFTTPVIYLAFDRLARR
Sbjct:  732 DNALYNAFGQRLISTIFTQSNLYRVVLEVKPEFRQGLAALDSLYVVSPAGRQVPLSAVARVIEKPMQLAVNHIGQFPATTISFNLAPGVALGEAVAAIRAATRQLDLPASVETGFQGAALAFQASLNNTLLLILAAVVTMYIVLGVLYESYIHPVTILSTLPSAAVGALLALLLAGHDLGIIAVIGIILLIGIVKKNAIMMIDFALDAERSQGKSPRDAIFEACLLRFRPILMTTLSALLGALPLMLGTGVGSELRHPLGITMVGGLLVSQVLTLFTTPVIYLAFDRLARR 1022          
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Match: A0A515D784_9BURK (MdtB/MuxB family multidrug efflux RND transporter permease subunit n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A515D784_9BURK)

HSP 1 Score: 432 bits (1112), Expect = 3.190e-141
Identity = 231/291 (79.38%), Postives = 263/291 (90.38%), Query Frame = 1
Query:    1 DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTGMQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEALKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIMMIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARR 873
            DN LYNAFGQR+ISTI+TQS+QYRVV+EVKPEF+KGPAAL  +Y+ + +G Q+PLS++ R+ EK +PL +NH  QF +AT+SFNLAAG SLGDAV AI+A + ++ +P+SV+T+FQGAA AF+ASL NTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSA VGALLAL++   D+ II IIGIILLIGIVKKNAIMMIDFALDAER EGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELR PLGITMVGGL+VSQ+LTLFTTPVIYLAFDR+ARR
Sbjct:  730 DNALYNAFGQRMISTIYTQSNQYRVVMEVKPEFQKGPAALNGIYLVTGSGGQIPLSSIARISEKTAPLVVNHLSQFSAATVSFNLAAGASLGDAVDAIKAAEAEIGLPVSVQTSFQGAALAFQASLSNTLLLILAAIITMYIVLGVLYESYIHPVTILSTLPSAAVGALLALLLTGHDIDIIAIIGIILLIGIVKKNAIMMIDFALDAERHEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGGVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLAFDRVARR 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6139.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S0CWX9_9RHOO6.510e-15080.07Multidrug transporter subunit MdtC (Fragment) n=1 ... [more]
A0A537D1N4_9PROT4.230e-14981.85Multidrug transporter subunit MdtC (Fragment) n=1 ... [more]
A0A536SF93_9PROT6.350e-14982.13Multidrug transporter subunit MdtC (Fragment) n=1 ... [more]
A0A6C2CT34_9RHOO1.020e-14580.41MdtB/MuxB family multidrug efflux RND transporter ... [more]
UPI00199B23641.360e-14577.05Efflux RND transporter permease subunit n=1 Tax=Bu... [more]
A0A0A1FGD7_9BURK3.600e-14580.82Cobalt-zinc-cadmium resistance protein CzcA Cation... [more]
A0A3S0W2N2_9GAMM2.130e-14380.76MdtB/MuxB family multidrug efflux RND transporter ... [more]
A0A537CJA8_9PROT1.000e-14180.76MdtB/MuxB family multidrug efflux RND transporter ... [more]
A0A1G3GZW7_9RHOO2.280e-14180.76Multidrug transporter subunit MdtC n=1 Tax=Rhodocy... [more]
A0A515D784_9BURK3.190e-14179.38MdtB/MuxB family multidrug efflux RND transporter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6139contigP-wetherbeei_contig6139:2599..3474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1005048.CFU_1184
Preferred namemdtB
PFAMsACR_tran
Model size876
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03296,ko:K07788,ko:K07789
KEGG TC2.A.6.2
KEGG Pathwayko02020,map02020
KEGG ModuleM00648
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-143
EggNOG OGsCOG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2VHFI@28216|Betaproteobacteria,472J3@75682|Oxalobacteraceae
DescriptionBelongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Cds size876
COG categoryV
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186891.4808686-CDS-P-wetherbeei_contig6139:2598..34741683186891.4808686-CDS-P-wetherbeei_contig6139:2598..3474Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6139 2599..3474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6139.2.1prot_P-wetherbeei_contig6139.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6139 2599..3474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6139.2.1

>prot_P-wetherbeei_contig6139.2.1 ID=prot_P-wetherbeei_contig6139.2.1|Name=mRNA_P-wetherbeei_contig6139.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp
DNVLYNAFGQRLISTIFTQSSQYRVVLEVKPEFRKGPAALLDLYVPSSTG
MQVPLSAVTRLVEKPSPLAINHQGQFPSATISFNLAAGHSLGDAVKAIEA
LKKDLQVPISVRTTFQGAASAFRASLGNTLLLILAAIITMYIVLGVLYES
YIHPVTILSTLPSAGVGALLALIVARSDLGIIGIIGIILLIGIVKKNAIM
MIDFALDAERTEGKSPREAIYQACLLRFRPILMTTMSALLGALPLMLGGG
VGSELRHPLGITMVGGLIVSQLLTLFTTPVIYLAFDRLARRV
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mRNA from alignment at P-wetherbeei_contig6139:2599..3474-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6139.2.1 ID=mRNA_P-wetherbeei_contig6139.2.1|Name=mRNA_P-wetherbeei_contig6139.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig6139:2599..3474- (Phaeothamnion wetherbeei SAG_119_79)
GACAACGTGCTCTACAACGCATTCGGCCAGCGGTTGATTTCGACCATCTT CACGCAATCAAGCCAGTATCGCGTCGTGCTCGAAGTGAAACCCGAATTCC GCAAAGGGCCGGCTGCTTTGCTCGATCTCTACGTGCCGAGCAGCACCGGC ATGCAGGTGCCGCTATCCGCGGTTACGCGGCTGGTTGAAAAGCCGTCGCC GCTGGCGATCAACCACCAGGGCCAGTTTCCGTCCGCCACCATTTCTTTCA ACCTGGCGGCAGGCCACTCGCTTGGTGACGCGGTGAAGGCGATCGAGGCA TTGAAAAAAGACCTCCAGGTGCCGATCAGCGTGCGTACGACTTTTCAGGG CGCGGCATCCGCGTTCCGCGCCTCGCTGGGCAACACGCTGCTGTTGATAC TGGCGGCCATCATTACCATGTACATCGTACTCGGCGTGCTGTACGAGAGC TACATACACCCGGTGACCATATTGTCGACGCTGCCGTCCGCCGGCGTGGG CGCGCTGCTGGCGCTCATCGTAGCGCGCAGCGATCTGGGCATCATCGGCA TCATCGGCATCATCCTGCTGATTGGCATCGTCAAGAAGAACGCGATCATG ATGATTGACTTCGCGCTGGATGCCGAGCGTACCGAAGGCAAGTCGCCGCG CGAGGCGATTTACCAGGCCTGCCTCTTGCGCTTCCGACCGATCCTGATGA CGACGATGTCGGCGTTGCTGGGCGCGCTGCCGCTGATGCTCGGCGGCGGC GTGGGTTCGGAGCTGCGCCACCCGCTTGGCATCACGATGGTCGGTGGCCT CATTGTCAGCCAGCTGCTCACGTTGTTCACGACACCCGTGATTTATCTCG CCTTTGACCGGCTTGCGCGTCGCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6139:2599..3474-

>mRNA_P-wetherbeei_contig6139.2.1 ID=mRNA_P-wetherbeei_contig6139.2.1|Name=mRNA_P-wetherbeei_contig6139.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig6139:2599..3474- (Phaeothamnion wetherbeei SAG_119_79)
GACAACGTGCTCTACAACGCATTCGGCCAGCGGTTGATTTCGACCATCTT
CACGCAATCAAGCCAGTATCGCGTCGTGCTCGAAGTGAAACCCGAATTCC
GCAAAGGGCCGGCTGCTTTGCTCGATCTCTACGTGCCGAGCAGCACCGGC
ATGCAGGTGCCGCTATCCGCGGTTACGCGGCTGGTTGAAAAGCCGTCGCC
GCTGGCGATCAACCACCAGGGCCAGTTTCCGTCCGCCACCATTTCTTTCA
ACCTGGCGGCAGGCCACTCGCTTGGTGACGCGGTGAAGGCGATCGAGGCA
TTGAAAAAAGACCTCCAGGTGCCGATCAGCGTGCGTACGACTTTTCAGGG
CGCGGCATCCGCGTTCCGCGCCTCGCTGGGCAACACGCTGCTGTTGATAC
TGGCGGCCATCATTACCATGTACATCGTACTCGGCGTGCTGTACGAGAGC
TACATACACCCGGTGACCATATTGTCGACGCTGCCGTCCGCCGGCGTGGG
CGCGCTGCTGGCGCTCATCGTAGCGCGCAGCGATCTGGGCATCATCGGCA
TCATCGGCATCATCCTGCTGATTGGCATCGTCAAGAAGAACGCGATCATG
ATGATTGACTTCGCGCTGGATGCCGAGCGTACCGAAGGCAAGTCGCCGCG
CGAGGCGATTTACCAGGCCTGCCTCTTGCGCTTCCGACCGATCCTGATGA
CGACGATGTCGGCGTTGCTGGGCGCGCTGCCGCTGATGCTCGGCGGCGGC
GTGGGTTCGGAGCTGCGCCACCCGCTTGGCATCACGATGGTCGGTGGCCT
CATTGTCAGCCAGCTGCTCACGTTGTTCACGACACCCGTGATTTATCTCG
CCTTTGACCGGCTTGCGCGTCGCGTC
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