mRNA_P-wetherbeei_contig6132.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6132.1.1
Unique NamemRNA_P-wetherbeei_contig6132.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: I2BK42_DUNSA (Mitogen-activated protein kinase n=1 Tax=Dunaliella salina TaxID=3046 RepID=I2BK42_DUNSA)

HSP 1 Score: 135 bits (341), Expect = 1.510e-35
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLLS S YG  +D+WSVGCIF ELL  KPLF    YV  L+ I   +GSP  E+LGF+ + K+ R++  LPRCEP +F  ++P A P A+DL+++ML FDP  R+T  EAL H
Sbjct:  202 YRAPELLLSCSEYGTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLNLITRTIGSPSEEELGFISSDKARRYIRSLPRCEPTDFQKLWPNANPKAVDLVKKMLMFDPNKRITVEEALGH 319
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A088MB02_DUNTE (Mitogen-activated protein kinase n=3 Tax=Dunaliella TaxID=3044 RepID=A0A088MB02_DUNTE)

HSP 1 Score: 134 bits (337), Expect = 6.030e-35
Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLLS S YG  +D+WSVGCIF ELL  KPLF    YV  L+ I  ++GSP   +LGF+ + K+ R++  LPR EPA+F  ++P A P A+DL+++ML FDP  R+T  EALAH
Sbjct:  204 YRAPELLLSCSEYGTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLNLITRVIGSPAESELGFISSDKARRYIRSLPRAEPADFMRMWPNANPKAVDLVKKMLMFDPNKRITVEEALAH 321
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A7S0VBZ4_9CHLO (Mitogen-activated protein kinase n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VBZ4_9CHLO)

HSP 1 Score: 131 bits (330), Expect = 2.290e-33
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLLS + Y   +D+WSVGCIF ELL  KPLF    YV  L+ I  ++GSP  EDL F+ N K+ R++  LPR E A+F  +FP+A P ALDL+++ML FDP  R+T  EALAH
Sbjct:  214 YRAPELLLSCAGYSASIDVWSVGCIFAELLGRKPLFPGKDYVHQLNLITRVIGSPLEEDLEFISNDKAKRYIRSLPRNERADFQQLFPSAGPLALDLIKKMLVFDPTKRITVIEALAH 331
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A1Y3NRV0_PIRSE (Mitogen-activated protein kinase n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NRV0_PIRSE)

HSP 1 Score: 121 bits (304), Expect = 4.090e-32
Identity = 56/118 (47.46%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PE++LS   Y   +DMWSVGCI  ELL GKPLF+   YV  L+ I +++G+P  E L  +G+ ++LR++  LP+ +   F+ ++P A P ALDLL ++L FDP  R+T  EALAH
Sbjct:   10 YRAPEIMLSFKCYTKAIDMWSVGCILAELLGGKPLFKGRDYVDQLNQILSILGTPDDETLTRIGSERALRYIRSLPKTQKIPFSELYPNANPLALDLLEKLLKFDPAERITVEEALAH 127
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A4P9XBR0_9FUNG (Mitogen-activated protein kinase n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XBR0_9FUNG)

HSP 1 Score: 124 bits (312), Expect = 7.470e-32
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PE++LS  +Y   +DMWS+GCIF ELL GKPLF+   YV  L+ I A++G+P  E L  VG+ ++  ++  LP      FA +FP APP A+DLL ++L FDP AR+T  EALAH
Sbjct:  182 YRAPEIMLSFRSYTKAIDMWSIGCIFAELLGGKPLFKGRDYVDQLNQILAVLGTPDDETLRRVGSERAQLYIRSLPPSPKVAFATMFPRAPPLAIDLLEKLLQFDPAARITVEEALAH 299
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A507DG59_9FUNG (Mitogen-activated protein kinase n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DG59_9FUNG)

HSP 1 Score: 125 bits (313), Expect = 9.020e-32
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PE++LS  +Y   +DMWSVGCIF ELL GKPLFR   YV  L+ I A++G+P    +G VG+A++  ++  LPR    +F  ++P A P+A+DLL RML FDP  R+T   ALAH
Sbjct:  196 YRAPEIMLSFRSYTKAIDMWSVGCIFAELLGGKPLFRGRDYVDQLNQILAVLGTPDDATIGRVGSARAQIYIRSLPRAVKISFGTLYPNASPSAIDLLERMLQFDPSTRITVEAALAH 313
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A7S0SHH2_9CHLO (Mitogen-activated protein kinase (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHH2_9CHLO)

HSP 1 Score: 123 bits (309), Expect = 2.610e-31
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLLS + Y   +D+WSVGCIF ELL  KPLF    YV  L+ I  ++GSP   D+ F+ + K+ R++  LPR    +F  V+P A PAA+DL+ +ML FDPR R+T  +AL+H
Sbjct:  222 YRAPELLLSCTEYTSAIDVWSVGCIFAELLGRKPLFPGKDYVHQLNLITRVIGSPEERDMEFISSEKARRYIRSLPRSPRVDFGKVYPDAEPAAIDLIDQMLAFDPRRRITVEQALSH 339
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A0D2MLS6_9CHLO (Extracellular signal-regulated kinase1/2 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MLS6_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 3.810e-31
Identity = 61/118 (51.69%), Postives = 76/118 (64.41%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLLS   Y   +D+WSVGCI  ELL  KPLF    YV  L+ I   +GSP  ED+ FV + K+ R+L  LPRC  A+F  ++P A P ALDLL RML FDP  R++  +AL H
Sbjct:  156 YRAPELLLSCPDYTAAIDIWSVGCILAELLGRKPLFPGKDYVHQLNLITKAIGSPGEEDIQFVSSEKARRYLRSLPRCPRADFQELWPQADPQALDLLSRMLVFDPSRRISVDDALRH 273
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A7J8V3V3_9ROSI (Mitogen-activated protein kinase n=1 Tax=Gossypium klotzschianum TaxID=34286 RepID=A0A7J8V3V3_9ROSI)

HSP 1 Score: 122 bits (307), Expect = 3.950e-31
Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLL+ S Y   +DMWSVGCIFGE+++ +PLF    YV  L  I  L+GSP    LGF+ +  + R+   LP+C    F+A FP   P A+DLL +ML FDP  R+TA EAL H
Sbjct:  207 YRAPELLLNCSEYTAAIDMWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSNNARRYFRQLPQCRKQQFSARFPNMSPGAVDLLEKMLVFDPNKRITAEEALCH 324
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BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Match: A0A0K9PC20_ZOSMR (Mitogen-activated protein kinase n=3 Tax=Liliopsida TaxID=4447 RepID=A0A0K9PC20_ZOSMR)

HSP 1 Score: 122 bits (307), Expect = 5.410e-31
Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 1 
Query:    1 YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQALVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRRMLTFDPRARVTAAEALAH 354
            YR+PELLL+ S Y   +D+WSVGCIF EL+  KPLF    +V  L  +  L+G+P   DLGFV N  + R+++ LPR    +F  +FP   PAA+DL+ RMLTFDPR R+T  EALAH
Sbjct:  240 YRAPELLLNSSEYTTAIDVWSVGCIFMELMVRKPLFPGRDHVHQLRLLMELIGTPNDADLGFV-NENARRYISQLPRHTRKSFPEMFPNVQPAAIDLVERMLTFDPRERITVEEALAH 356
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6132.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I2BK42_DUNSA1.510e-3553.39Mitogen-activated protein kinase n=1 Tax=Dunaliell... [more]
A0A088MB02_DUNTE6.030e-3553.39Mitogen-activated protein kinase n=3 Tax=Dunaliell... [more]
A0A7S0VBZ4_9CHLO2.290e-3354.24Mitogen-activated protein kinase n=1 Tax=Polytomel... [more]
A0A1Y3NRV0_PIRSE4.090e-3247.46Mitogen-activated protein kinase n=1 Tax=Piromyces... [more]
A0A4P9XBR0_9FUNG7.470e-3250.00Mitogen-activated protein kinase n=2 Tax=Caulochyt... [more]
A0A507DG59_9FUNG9.020e-3250.00Mitogen-activated protein kinase n=1 Tax=Synchytri... [more]
A0A7S0SHH2_9CHLO2.610e-3149.15Mitogen-activated protein kinase (Fragment) n=1 Ta... [more]
A0A0D2MLS6_9CHLO3.810e-3151.69Extracellular signal-regulated kinase1/2 n=1 Tax=M... [more]
A0A7J8V3V3_9ROSI3.950e-3150.00Mitogen-activated protein kinase n=1 Tax=Gossypium... [more]
A0A0K9PC20_ZOSMR5.410e-3151.69Mitogen-activated protein kinase n=3 Tax=Liliopsid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6132contigP-wetherbeei_contig6132:3080..3433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog3712.Bo4g025200.1
PFAMsPkinase
Model size354
Max annot lvl35493|Streptophyta
KEGG koko:K04371,ko:K04464,ko:K20600
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04138,ko04139,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05206,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,ko05418,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04138,map04139,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05206,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231,map05418
KEGG ModuleM00687,M00690
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009719,GO:0009725,GO:0009733,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0014070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0035821,GO:0036211,GO:0042221,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044003,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052167,GO:0052169,GO:0052173,GO:0052200,GO:0052255,GO:0052306,GO:0052308,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0071704,GO:0075136,GO:0080026,GO:0140096,GO:1901564,GO:1901698,GO:1901700
Exons1
Evalue6.94e-33
EggNOG OGsKOG0660@1|root,KOG0660@2759|Eukaryota,37I3U@33090|Viridiplantae,3G736@35493|Streptophyta,3HZT8@3699|Brassicales
EC2.7.11.24
Descriptionmitogen-activated protein kinase
Cds size354
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186891.0555594-CDS-P-wetherbeei_contig6132:3079..34331683186891.0555594-CDS-P-wetherbeei_contig6132:3079..3433Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6132 3080..3433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6132.1.1prot_P-wetherbeei_contig6132.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6132 3080..3433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6132.1.1

>prot_P-wetherbeei_contig6132.1.1 ID=prot_P-wetherbeei_contig6132.1.1|Name=mRNA_P-wetherbeei_contig6132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
YRSPELLLSESTYGLGVDMWSVGCIFGELLSGKPLFRAGSYVLMLHGIQA
LVGSPRSEDLGFVGNAKSLRFLAGLPRCEPANFAAVFPTAPPAALDLLRR
MLTFDPRARVTAAEALAH
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mRNA from alignment at P-wetherbeei_contig6132:3080..3433+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6132.1.1 ID=mRNA_P-wetherbeei_contig6132.1.1|Name=mRNA_P-wetherbeei_contig6132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig6132:3080..3433+ (Phaeothamnion wetherbeei SAG_119_79)
TACCGGTCGCCGGAGCTGCTGCTAAGCGAGTCGACCTACGGGCTCGGCGT
CGACATGTGGAGCGTCGGCTGCATCTTTGGAGAGCTTTTGTCGGGCAAGC
CGCTCTTCCGCGCCGGCTCGTACGTTCTGATGCTTCACGGCATCCAGGCG
CTCGTTGGCAGCCCGCGCTCGGAGGACCTCGGCTTCGTTGGCAACGCCAA
ATCGCTTCGCTTCCTGGCGGGGCTGCCGCGGTGCGAGCCGGCCAACTTTG
CGGCCGTCTTTCCGACAGCGCCGCCGGCGGCGCTGGACCTGCTGCGGCGG
ATGCTGACGTTCGACCCCCGCGCGCGGGTGACCGCCGCCGAGGCGCTGGC
GCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6132:3080..3433+

>mRNA_P-wetherbeei_contig6132.1.1 ID=mRNA_P-wetherbeei_contig6132.1.1|Name=mRNA_P-wetherbeei_contig6132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig6132:3080..3433+ (Phaeothamnion wetherbeei SAG_119_79)
TACCGGTCGCCGGAGCTGCTGCTAAGCGAGTCGACCTACGGGCTCGGCGT
CGACATGTGGAGCGTCGGCTGCATCTTTGGAGAGCTTTTGTCGGGCAAGC
CGCTCTTCCGCGCCGGCTCGTACGTTCTGATGCTTCACGGCATCCAGGCG
CTCGTTGGCAGCCCGCGCTCGGAGGACCTCGGCTTCGTTGGCAACGCCAA
ATCGCTTCGCTTCCTGGCGGGGCTGCCGCGGTGCGAGCCGGCCAACTTTG
CGGCCGTCTTTCCGACAGCGCCGCCGGCGGCGCTGGACCTGCTGCGGCGG
ATGCTGACGTTCGACCCCCGCGCGCGGGTGACCGCCGCCGAGGCGCTGGC
GCAC
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