mRNA_P-wetherbeei_contig6131.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A835ZIB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIB1_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.070e-44 Identity = 106/264 (40.15%), Postives = 143/264 (54.17%), Query Frame = 2
Query: 71 RRARPFLVTMAPLCGLVVWNEYAKAQKRKPPPDVRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQ--MQVELQGLVKFV----CCRKLGKDPDAFM--EDAVFSPAANLALVCLDRLGALDVRAMRAAGVNPRHFTVTDLAEQRVPLREGVAY--GTRYVVRDSD 832
+RA + T AP+ L W+ Y ++RKPP + F VGS DD+ AD L++GD+L FRR + +QP A AL A R + R+D VG+VI DR GVP +LE+T GLR RR+DERV WS+S EI+ + L ++ R ERYA T E W M EL GL+K+ R+ G PDA + E V S A L L LD++G +D+ A+ + + DL E R+PL G AY G +VR D
Sbjct: 3 KRAALVVGTAAPILALSGWSVYVTQERRKPPANTDFVVGSTDDILADKLKTGDLLLFRRNWALMQPPAAALALAARAVFNTRYDHVGLVIKDRFGVPLVLEVTQLGLRLRRFDERVSWSRSDEIVALPLRAAPPDEARVKAERYARSLT----PERRLAWAQPSQSMSAELAGLLKYWLANRAARRRGTSPDAKLWGEGLVASRDAALVLATLDKMGLVDLAAVEREVAPAQLLSPRDLVEGRLPLTGGNAYLAGQELLVRLRD 262
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: D8LIB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB1_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.830e-43 Identity = 95/267 (35.58%), Postives = 143/267 (53.56%), Query Frame = 2
Query: 47 DSPKMNTLRRARPFLVTMAPLCGLVVWNEYAKAQKRKPPPDVRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQMQVELQGLVKFVCCR--KLGKDPDAFMEDAVF------SPAANLALVCLDRLGALDVRAMRAAGVNPRHFTVTDLAEQRVPLREGVAYGTRYVVR 823
SP M +RRA+ + +P + +W Y ++RK P +VRF +GS DD+ + L++GD+L F RR + + P AL+ R + +RFD GVV+ DR G P + E+TY G++ RR+DER+L SK EI+L+ + F+C E+ R +ER+ G +E + N + ++L G +K + + GK P E + SPA L + CLD GA D A+ A P T DL VPL+EG +G + VR
Sbjct: 6 SSPMM--IRRAKRAAIFASPFVAVGLWAGYVLKERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVK---GLTYREPIAN----TLWIDLLGALKLKTTKPGEWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADGAAV-AEWKYPLAITPKDLENCEVPLKEGANFGEPHTVR 262
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A3M6VDV4_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDV4_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.210e-17 Identity = 77/250 (30.80%), Postives = 119/250 (47.60%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYAKA-----QKRKPPPD--VRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQMQVELQGLVKFVCCRKLGKDPDAFMEDAVFSPAAN--LALVCLDRLGALDVRAMRAAGVNPRHFTVTDLAEQRVPLREGVAYGTRY 814
+ + PL GL W+ AK Q R PP + F GS DD + L +GD++FF+R+L+++QPLA T TR RFD G V DRLG +I+E T ++ R Y R+L S++ EI +++L E ++ + A + T ENVG + ++ + L+ R D A F A + LV +++ ++ A + PRH LAE +V L+ V G R+
Sbjct: 6 LALLPLAGLAAWSGNAKLMRMRHQVRAPPGGEALDFIPGSMDDTIMETLETGDLVFFQRKLTAMQPLAALHTWITRVRMRPRFDHCGWVYVDRLGRKFIVEETLKKVQCRPYSARLLTSEATEISVLQLKLERSKEMQEAASSFIT--------ENVGRMSRISLRHTVSALISPDAMRTTSPDATPSFPSAAFVAEAYDAMGLVSKNQI-TTSQPSLPATAITPRH-----LAEGKVILQ--VPPGKRF 239
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A8J5IW41_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IW41_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.810e-17 Identity = 73/241 (30.29%), Postives = 116/241 (48.13%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYAKA-----QKRKPPPD--VRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQMQVELQGLVKFVCCRKLGKDPDAFMEDAVFSPAANLALVCLDRLGALDVRA-MRAAGVNPRHFTVTDLAEQRVPLRE 790
+ + PL GL W+ A+ Q R PP + F GS DD + L +GD++FF+R+L++LQPLA T TR RFD G + DRLG +I+E T ++ R Y R+L S++ EI ++ L E +Q + A ++ ENVG + ++ + GL+ RK D A F A A+ ++ +++ + A V PR DLA ++ L++
Sbjct: 427 LALLPLVGLAAWSGNARLTRMRRQVRAPPGGEALEFIPGSMDDTIMETLETGDLIFFQRKLTALQPLAALHTWVTRLQLRPRFDHCGWIYVDRLGRKFIVEETLDKVQCRPYSARLLTSEATEISVLTLKLERSKQMQEA--------ASTFIAENVGRTSRISLRHTVSGLISPEEMRKPSSDATPSFPCAAFVVEAYDAMGLANKNQLTNIQPPLSATNVTPR-----DLAANKIKLQK 654
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A225WM76_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WM76_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 9.870e-17 Identity = 55/151 (36.42%), Postives = 83/151 (54.97%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYA-----KAQKRKPPPD--VRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGR 523
+T+ PL GL W+ A + Q R PP + F GS DD + L +GD++FF+R+L+++QPLA T TR T RFD G V DRLG +I+E T ++ R Y R+L S++ EI ++ L E ++ + A + + GR
Sbjct: 6 LTLLPLAGLAAWSGNATLTRMRHQVRAPPGGEALEFIPGSMDDTIMETLETGDLVFFQRKLTAMQPLAALHTWITRVQTRPRFDHCGWVYVDRLGRKFIVEETLDKVQCRPYSARLLTSQATEISVLTLKMERSKEMQEAANAFIADNLGR 156
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A2D4C3A5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3A5_PYTIN) HSP 1 Score: 88.2 bits (217), Expect = 1.430e-16 Identity = 56/150 (37.33%), Postives = 85/150 (56.67%), Query Frame = 2
Query: 89 LVTMAPLCGLVVWNEYAKAQKRKPPPDVR---FQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAF--ECDEQHRRALERYATMSTGR 523
++T+ P+ + W+ A A + DVR F VGS DD AD L +GD++FF RRL++LQPLA T RQ RFD VG + DR+G +++E T ++ R Y R+L S+S EI+++ L + D+Q + A + T + R
Sbjct: 10 VLTLLPVAAVAGWS--ANAAFVRSQHDVRSLEFVVGSMDDTIADTLETGDLVFFTRRLTALQPLAALHTWLLRQRFNPRFDHVGFIYVDRMGRRFVVEETLSQVQCRPYSARILTSESSEIVVLPLKTLQQRDKQFQDAALSFVTQNVNR 157
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: D0P039_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P039_PHYIT) HSP 1 Score: 85.9 bits (211), Expect = 2.970e-16 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYA-----KAQKRKPP--PDVRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGR 523
+ + PL L W+ A + Q R PP + F GS D+ + L +GD++FF+R+L++LQPLA T ATR RFD G + DRLG +I+E T ++ R Y R+L S++ EI ++ L E ++ + A + T + GR
Sbjct: 6 LVLLPLVSLTAWSVNATLMRMRHQVRAPPGAEALEFIPGSMDETIMETLETGDLIFFQRKLTALQPLAALHTWATRLRLRPRFDHCGWIYVDRLGRTFIVEETLNKVQCRPYSTRLLTSEATEIFVLTLKHERSKEIQEAASAFITENVGR 156
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: W2HAY4_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2HAY4_PHYPR) HSP 1 Score: 87.0 bits (214), Expect = 3.800e-16 Identity = 72/241 (29.88%), Postives = 114/241 (47.30%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYA-----KAQKRKPPPD--VRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQMQVELQGLVKFVCCRKLGKDPDAFMEDAVFSPAANLALVCLDRLGALDVRAMRAAGVNPRHFTVT--DLAEQRVPLR 787
+ + PL G V W+ A + Q R PP + F GS DD + L +GD++FF+R+L++LQPLA T TR RFD G + DRLG +I+E T ++ R Y R+L S++ EI ++ L +H R+ E S ++ +N G + ++ + L+ RK D A P A + D +G ++ + ++ TVT DLA ++ LR
Sbjct: 6 LALLPLAGAVAWSGNATLTRMRHQVRAPPGGEALEFIPGSMDDTIMETLETGDLIFFQRKLTALQPLAALHTWVTRLQLRPRFDHCGWIYVDRLGRKFIVEETLDKVQCRPYSARLLTSEATEISVLTL------KHERSKEIQEAASA--FIADNAGRTSRISLRHTVSALINPEEMRKPSSDA------APSFPCAAFVVEAYDAMGLVNKDQLTSSQPPLSATTVTPRDLAASKIKLR 232
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: A0A833SI83_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SI83_PHYIN) HSP 1 Score: 85.9 bits (211), Expect = 9.880e-16 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 2
Query: 92 VTMAPLCGLVVWNEYA-----KAQKRKPP--PDVRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGR 523
+ + PL L W+ A + Q R PP + F GS D+ + L +GD++FF+R+L++LQPLA T ATR RFD G + DRLG +I+E T ++ R Y R+L S++ EI ++ L E ++ + A + T + GR
Sbjct: 6 LVLLPLVSLTAWSVNATLMRMRHQVRAPPGAEALEFIPGSMDETIMETLETGDLIFFQRKLTALQPLAALHTWATRLRLRPRFDHCGWIYVDRLGRTFIVEETLNKVQCRPYSTRLLTSEATEIFVLTLKHERSKEIQEAASAFITENVGR 156
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Match: G4ZWK6_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWK6_PHYSP) HSP 1 Score: 84.3 bits (207), Expect = 1.050e-15 Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 2
Query: 89 LVTMAPLCGLVVWNEYAKA-----QKRKPPPD--VRFQVGSPDDLTADGLRSGDMLFFRRRLSSLQPLAVALTAATRQLTGARFDGVGVVITDRLGVPWILELTYGGLRYRRYDERVLWSKSREILLVRLAFECDEQHRRALERYATMSTGRYVKENVGNWTLGQMQVELQGLVKFVCCRKLGKD 622
++ + PL GL W+ A Q R PP + F GS DD + L +GD++FF+R+L+++QPLA T TR RFD G + DRLG +I+E T ++ R Y R+L S++ EI ++ L E ++ + A ++ EN+G + ++ + L+ RK G D
Sbjct: 5 VLALLPLAGLGAWSANATLTRMSYQVRAPPGGEALEFIPGSMDDTIMETLETGDLVFFQRKLTAMQPLAALHTWVTRLQLRPRFDHCGWIYVDRLGRKFIVEETLDKVQCRPYSARLLTSEATEISVLTLKLERSKEMQEA--------ANAFIAENLGRASRISLRHTVSALINPEEMRKAGAD 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6131.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6131.2.1 >prot_P-wetherbeei_contig6131.2.1 ID=prot_P-wetherbeei_contig6131.2.1|Name=mRNA_P-wetherbeei_contig6131.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp MNTLRRARPFLVTMAPLCGLVVWNEYAKAQKRKPPPDVRFQVGSPDDLTAback to top mRNA from alignment at P-wetherbeei_contig6131:1215..3296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6131.2.1 ID=mRNA_P-wetherbeei_contig6131.2.1|Name=mRNA_P-wetherbeei_contig6131.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2082bp|location=Sequence derived from alignment at P-wetherbeei_contig6131:1215..3296+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6131:1215..3296+ >mRNA_P-wetherbeei_contig6131.2.1 ID=mRNA_P-wetherbeei_contig6131.2.1|Name=mRNA_P-wetherbeei_contig6131.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig6131:1215..3296+ (Phaeothamnion wetherbeei SAG_119_79)back to top |