mRNA_P-wetherbeei_contig6123.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6123.3.1
Unique NamemRNA_P-wetherbeei_contig6123.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A521M886_9HYPH (SDR family oxidoreductase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M886_9HYPH)

HSP 1 Score: 436 bits (1120), Expect = 1.650e-153
Identity = 223/248 (89.92%), Postives = 233/248 (93.95%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            MKIDF GKKAIVCGGSKGIGRAIALGFAACGGDVSICAREP SLE TR EIA+LG KAHAASADLS+GDAVRGYVR AV ALGGCDLLVNNASAFGSTDD KGWT +LAVDML+IVHATQEALPAL+QSQGSVVNISSISALHPAARQPPYGAIKAAVIHYT+TQAAMYAKDRIRVNCIAPGS++FPGGVWDRRKT N  +Y  TLASIPFGRMG PEE+ANVALFLASPLASWVTGQAIAVAGAQGL
Sbjct:    1 MKIDFAGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPKSLEETRGEIARLGHKAHAASADLSKGDAVRGYVRDAVAALGGCDLLVNNASAFGSTDDDKGWTSSLAVDMLSIVHATQEALPALRQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTVTQAAMYAKDRIRVNCIAPGSIEFPGGVWDRRKTDNPALYNGTLASIPFGRMGLPEEVANVALFLASPLASWVTGQAIAVAGAQGL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A5C5SBM3_9HYPH (SDR family oxidoreductase n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SBM3_9HYPH)

HSP 1 Score: 413 bits (1062), Expect = 1.130e-144
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            M IDF GKKAI+CGGS+GIG+AIALGFA CGGDVSICAR+  +LE TR+EIAKLGRKAHAASADLSQG+AVRGYVR A+ ALGG DLLVNNASAFGS+DD KGWT +LAVDM++IVHATQEALPALKQSQGSVVNISSI+ALHPAARQPPYGAIKAAVIHYT TQAAMYA DR+RVNCIAPGS++FPGGVWDRRKT N  +Y  TLASIPFGRMG PEE+ANVALFLASPLASWVTGQ IAVAGAQGL
Sbjct:    1 MNIDFAGKKAIICGGSRGIGKAIALGFATCGGDVSICARDRKALEETRSEIAKLGRKAHAASADLSQGEAVRGYVRDAIAALGGVDLLVNNASAFGSSDDDKGWTSSLAVDMVSIVHATQEALPALKQSQGSVVNISSIAALHPAARQPPYGAIKAAVIHYTTTQAAMYAVDRVRVNCIAPGSIEFPGGVWDRRKTENPTLYNATLASIPFGRMGHPEEVANVALFLASPLASWVTGQTIAVAGAQGL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A521QLI6_9HYPH (SDR family oxidoreductase n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QLI6_9HYPH)

HSP 1 Score: 407 bits (1046), Expect = 3.100e-142
Identity = 206/248 (83.06%), Postives = 223/248 (89.92%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            MKIDFTGKKAI+CGGS+GIGRAIALGFAACGG+VSICAR+P +LE TRAEIAK G KAHAASADLS+GD VRGYVR AV ALGG D LVNNASAFGS+DD  GWT NLAVDML+IVHATQEALP+LK+ QGSV+NISSI+A HPA RQPPYGAIKAAVIHYT+TQAAMYA DR+RVNCIAPGS+DFPGGVWDRRKT N  +Y  TLASIPFGR GTPEE+ANVALFLASP ASWVTGQ IAVAG QGL
Sbjct:    1 MKIDFTGKKAIICGGSRGIGRAIALGFAACGGEVSICARDPKALEETRAEIAKHGHKAHAASADLSKGDVVRGYVRDAVAALGGVDFLVNNASAFGSSDDDHGWTSNLAVDMLSIVHATQEALPSLKKGQGSVLNISSIAAHHPAGRQPPYGAIKAAVIHYTVTQAAMYAADRVRVNCIAPGSIDFPGGVWDRRKTDNPKLYNGTLASIPFGRFGTPEEVANVALFLASPHASWVTGQTIAVAGGQGL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A259MQW6_9PROT (3-oxoacyl-ACP reductase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MQW6_9PROT)

HSP 1 Score: 406 bits (1044), Expect = 6.250e-142
Identity = 204/248 (82.26%), Postives = 224/248 (90.32%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            MK+DFTGK+AIVCGGS+GIG+AIA+GFAACGGDVSICAR+P +LE TRAE+AK G K HAASADL QGDAVRGYVR A+ ALGG D LVNNASAFGS+DD KGWT NLAVDML+IVHATQEALP LK+SQG+VVNISSISA HPAARQPPYGAIKAAVIHYT+TQAAMYA+DRIRVNCIAPGS++FPGGVWD+RKT N  +Y  TLASIPFGRMG  EE+ANVALFLASP ASWVTGQ IAVAG QGL
Sbjct:    1 MKLDFTGKRAIVCGGSRGIGKAIAMGFAACGGDVSICARDPKTLEETRAELAKHGHKTHAASADLGQGDAVRGYVRDAISALGGVDFLVNNASAFGSSDDDKGWTSNLAVDMLSIVHATQEALPELKKSQGNVVNISSISAHHPAARQPPYGAIKAAVIHYTVTQAAMYARDRIRVNCIAPGSIEFPGGVWDKRKTDNPALYNGTLASIPFGRMGHAEEVANVALFLASPFASWVTGQTIAVAGGQGL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A1H8QIB8_9PROT (3-oxoacyl-[acyl-carrier protein] reductase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8QIB8_9PROT)

HSP 1 Score: 406 bits (1043), Expect = 8.880e-142
Identity = 207/248 (83.47%), Postives = 224/248 (90.32%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            M IDFTGKKAIVCGGS+GIG+AIALGFAACGGDVSICAR+P +LE TRAEIAKLGRKAHAASADL+ GD VRGYVR AV  LGG D LVNNASAFG++DD KGW  NLAVDM+AIVHATQEA PALKQ QGSVVNISSI+A HPAARQPPYGAIKAAV+HYT TQAA+YAKDR+RVNCIAPGS++FPGGVWDRRKTA+  +Y  TLASIPFGRMG  EEIANVALFLASPLASWVTGQAI+VAG QGL
Sbjct:    1 MNIDFTGKKAIVCGGSRGIGKAIALGFAACGGDVSICARDPKALEETRAEIAKLGRKAHAASADLANGDKVRGYVRNAVAELGGVDFLVNNASAFGASDDDKGWGTNLAVDMMAIVHATQEAYPALKQVQGSVVNISSIAAFHPAARQPPYGAIKAAVVHYTTTQAALYAKDRVRVNCIAPGSIEFPGGVWDRRKTADPKLYNATLASIPFGRMGHAEEIANVALFLASPLASWVTGQAISVAGGQGL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A257PZ65_9PROT (3-oxoacyl-ACP reductase n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PZ65_9PROT)

HSP 1 Score: 350 bits (897), Expect = 1.510e-119
Identity = 181/248 (72.98%), Postives = 202/248 (81.45%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            MK DFTG+KAI+CGGS+GIGRAIALGFAA GGDVSICAR   +LE TRAEIA+ G  AHAA+ DL   DA+RGY+  A  ALGG D+LVNNASAFG+ DD   WT +LA+DMLAIVHATQ ALP L+QS+G VVN SSISAL  AARQPPYGAIKAAVIHYT TQAAMYA+  IRVN IAPGS++FPGG+WDRRKT N  +Y   L SIPFGR+G PEE+ANVALFLASPLASWVTGQ I V G Q L
Sbjct:    1 MKFDFTGRKAIICGGSRGIGRAIALGFAAAGGDVSICARGADALEQTRAEIAEHGHTAHAAAVDLGDADAIRGYIADAAAALGGIDVLVNNASAFGAADDEAAWTASLAIDMLAIVHATQAALPFLEQSRGCVVNTSSISALRAAARQPPYGAIKAAVIHYTSTQAAMYARSGIRVNGIAPGSIEFPGGIWDRRKTENPKLYGAVLNSIPFGRLGHPEEVANVALFLASPLASWVTGQTIVVDGGQSL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A2S6N117_RHOGL (3-oxoacyl-ACP reductase n=1 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6N117_RHOGL)

HSP 1 Score: 339 bits (870), Expect = 1.930e-115
Identity = 172/248 (69.35%), Postives = 200/248 (80.65%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL 744
            M IDFTG++A+VCGGS+GIGRA+ALGFAA G DVSICAR  G+LE TRAEIA  G +AHA   DLS   A+ GYV  A  ALGG D+LVNNASAFGS D+ + W D+LAVDMLAIVHATQ ALP LKQS+GSV+N SSI+AL  AARQPPYGAIKAAVIHYT TQAA+YA+D IRVN +APGS++FPGG+WDRR+T N  +Y   L +IPFGR+G PEE+A+V +FLASPLA WVTGQ I V G Q L
Sbjct:    1 MNIDFTGRRAVVCGGSRGIGRAVALGFAAAGADVSICARGAGTLEETRAEIAAHGHQAHAGCVDLSDSTAIGGYVAQAAAALGGIDVLVNNASAFGSADNEQAWVDSLAVDMLAIVHATQAALPFLKQSKGSVINTSSIAALRSAARQPPYGAIKAAVIHYTNTQAALYARDGIRVNGVAPGSIEFPGGIWDRRRTENPKLYDAVLGTIPFGRLGRPEEVASVVMFLASPLAGWVTGQTIVVDGGQTL 248          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A354V4N7_9PROT (3-oxoacyl-ACP reductase n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A354V4N7_9PROT)

HSP 1 Score: 338 bits (867), Expect = 5.530e-115
Identity = 175/246 (71.14%), Postives = 194/246 (78.86%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQ 738
            M  DFTG+KAI+CGGS+GIGRAIALG AA G DVSICAR   +LE TR EIA  G K HAAS DL    A++GY+  A  ALGG D+LVNNASAFGS DD   W  +LA+DMLAIVHAT  ALP LK+S+GSVVN SSISAL  A RQPPYGAIKAAVIHYT TQAAMYA+D IRVN IAPGS++FPGGVWDRRKT N  +Y   L SIPFGR+GTPEE+ANV +FLASPLASWVTGQ I V G Q
Sbjct:    1 MSFDFTGRKAIICGGSRGIGRAIALGMAAAGADVSICARGAEALETTRKEIAAFGHKTHAASVDLGNEAAIKGYITEAAAALGGIDVLVNNASAFGSADDEAAWVASLAIDMLAIVHATHAALPFLKESKGSVVNTSSISALRSAVRQPPYGAIKAAVIHYTNTQAAMYARDGIRVNGIAPGSIEFPGGVWDRRKTENPKLYGAVLNSIPFGRLGTPEEVANVVMFLASPLASWVTGQTIVVDGGQ 246          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: A0A1M3PEX1_9PROT (3-oxoacyl-ACP reductase n=1 Tax=Rhodospirillales bacterium 70-18 TaxID=1895826 RepID=A0A1M3PEX1_9PROT)

HSP 1 Score: 306 bits (784), Expect = 3.480e-102
Identity = 152/247 (61.54%), Postives = 192/247 (77.73%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQS-QGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQ 738
            M IDF+G++ +VCGGS+GIGR+IALGFAA G DVSICAR  G LE+TRAE+A  G  AHAA+ DL+Q D++  Y+ AA  ALGG D+LVNNAS FG TDD  GW  + AVD++A+V A+Q ALP L++  Q S+V++SSISA+ P+ R  PYGA+KAAVIHYT +QAAM A+  IRVNC+APGS++FPGG W++R+    PIY N L SIPF R+GTPEE+A+V LFLASP+A WVTGQ + V G Q
Sbjct:   10 MSIDFSGRRVVVCGGSRGIGRSIALGFAAGGADVSICARGAGPLESTRAELAAHGHVAHAAACDLAQADSIAAYIAAAATALGGIDILVNNASGFGMTDDEAGWGASFAVDVMAVVRASQAALPHLEKGRQPSIVSVSSISAMRPSTRSAPYGAVKAAVIHYTTSQAAMLARRGIRVNCVAPGSIEFPGGSWEKRRQEGSPIYDNVLKSIPFDRLGTPEEVADVVLFLASPMARWVTGQTVVVDGGQ 256          
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Match: UPI00200D3EFE (SDR family oxidoreductase n=1 Tax=Sediminicoccus rosea TaxID=1225128 RepID=UPI00200D3EFE)

HSP 1 Score: 305 bits (780), Expect = 8.760e-102
Identity = 155/246 (63.01%), Postives = 188/246 (76.42%), Query Frame = 1
Query:    1 MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAEIAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDDHKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPPYGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDPIYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQ 738
            M  DFTGK+ IVCGGSKGIGR++ALGFAA G  VSICAR   +L AT+AE   LG KAHAAS DL  G AV+ Y+ AA+ ALGGCD+LVNNAS FG TD  +GW  +L VD+LA   AT  ALPALK +QG++VN+SSIS   P+ R P Y A+KA +I+YT +QAA YA DR+RVN +APGS++FPGG W++R+T N  ++  TLASIPFGRMGTPEE+ANV LFLASPLA+WVTG  + V G Q
Sbjct:    1 MSFDFTGKRVIVCGGSKGIGRSVALGFAAAGAAVSICARGAEALAATKAE---LGAKAHAASCDLGDGAAVKAYIAAAIAALGGCDVLVNNASGFGMTDTEEGWAASLNVDVLATFRATAAALPALKAAQGNIVNLSSISGYGPSVRGPAYAAVKALLINYTQSQAASYAPDRVRVNGVAPGSIEFPGGSWEKRRTENPDLFNRTLASIPFGRMGTPEEVANVVLFLASPLAAWVTGHTVVVDGGQ 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6123.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M886_9HYPH1.650e-15389.92SDR family oxidoreductase n=1 Tax=Reyranella sp. T... [more]
A0A5C5SBM3_9HYPH1.130e-14484.68SDR family oxidoreductase n=1 Tax=Reyranella sp. C... [more]
A0A521QLI6_9HYPH3.100e-14283.06SDR family oxidoreductase n=2 Tax=Reyranella TaxID... [more]
A0A259MQW6_9PROT6.250e-14282.263-oxoacyl-ACP reductase n=6 Tax=Alphaproteobacteri... [more]
A0A1H8QIB8_9PROT8.880e-14283.473-oxoacyl-[acyl-carrier protein] reductase n=3 Tax... [more]
A0A257PZ65_9PROT1.510e-11972.983-oxoacyl-ACP reductase n=1 Tax=Rhodospirillales b... [more]
A0A2S6N117_RHOGL1.930e-11569.353-oxoacyl-ACP reductase n=1 Tax=Rhodopila globifor... [more]
A0A354V4N7_9PROT5.530e-11571.143-oxoacyl-ACP reductase n=2 Tax=Acetobacteraceae T... [more]
A0A1M3PEX1_9PROT3.480e-10261.543-oxoacyl-ACP reductase n=1 Tax=Rhodospirillales b... [more]
UPI00200D3EFE8.760e-10263.01SDR family oxidoreductase n=1 Tax=Sediminicoccus r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6123contigP-wetherbeei_contig6123:1657..2403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000002_gene2348
PFAMsadh_short_C2
Model size747
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.19e-141
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MW46@1224|Proteobacteria,2TUTU@28211|Alphaproteobacteria
EC1.1.1.100
Descriptionshort-chain dehydrogenase reductase SDR
Cds size747
COG categoryIQ
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186890.0643034-CDS-P-wetherbeei_contig6123:1656..24031683186890.0643034-CDS-P-wetherbeei_contig6123:1656..2403Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6123 1657..2403 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6123.3.1prot_P-wetherbeei_contig6123.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6123 1657..2403 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6123.3.1

>prot_P-wetherbeei_contig6123.3.1 ID=prot_P-wetherbeei_contig6123.3.1|Name=mRNA_P-wetherbeei_contig6123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
MKIDFTGKKAIVCGGSKGIGRAIALGFAACGGDVSICAREPGSLEATRAE
IAKLGRKAHAASADLSQGDAVRGYVRAAVEALGGCDLLVNNASAFGSTDD
HKGWTDNLAVDMLAIVHATQEALPALKQSQGSVVNISSISALHPAARQPP
YGAIKAAVIHYTITQAAMYAKDRIRVNCIAPGSVDFPGGVWDRRKTANDP
IYKNTLASIPFGRMGTPEEIANVALFLASPLASWVTGQAIAVAGAQGL*
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mRNA from alignment at P-wetherbeei_contig6123:1657..2403-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6123.3.1 ID=mRNA_P-wetherbeei_contig6123.3.1|Name=mRNA_P-wetherbeei_contig6123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:1657..2403- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCGATTTCACGGGCAAGAAGGCCATCGTTTGCGGCGGCTCCAA GGGCATCGGCCGAGCCATCGCGCTGGGCTTTGCGGCCTGCGGCGGCGACG TCTCGATCTGCGCCCGCGAACCTGGGTCGCTCGAGGCGACGCGGGCCGAG ATCGCCAAGCTCGGCCGCAAGGCCCATGCCGCCAGTGCCGATCTTTCCCA GGGCGATGCCGTGCGCGGCTACGTGCGCGCGGCCGTCGAGGCCCTCGGCG GCTGCGACCTGCTGGTCAACAATGCCTCGGCCTTCGGCTCGACGGACGAC CACAAGGGTTGGACCGACAATCTCGCCGTCGACATGCTGGCGATCGTGCA CGCCACGCAGGAGGCCTTGCCGGCGCTGAAGCAAAGCCAGGGCAGCGTGG TGAACATCTCCTCAATTTCCGCGCTCCATCCCGCGGCGCGCCAGCCGCCC TACGGCGCCATCAAGGCAGCGGTGATCCACTACACGATCACGCAGGCTGC GATGTATGCGAAGGACCGTATCCGCGTGAACTGCATCGCCCCCGGCTCGG TCGACTTTCCCGGCGGCGTCTGGGACCGGCGCAAGACCGCCAACGACCCG ATCTACAAGAACACGCTGGCCTCGATCCCGTTCGGTCGCATGGGCACGCC GGAAGAAATCGCCAATGTGGCGCTGTTCCTGGCCTCGCCGCTCGCATCGT GGGTGACCGGGCAGGCCATCGCGGTGGCGGGCGCGCAGGGACTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6123:1657..2403-

>mRNA_P-wetherbeei_contig6123.3.1 ID=mRNA_P-wetherbeei_contig6123.3.1|Name=mRNA_P-wetherbeei_contig6123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:1657..2403- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCGATTTCACGGGCAAGAAGGCCATCGTTTGCGGCGGCTCCAA
GGGCATCGGCCGAGCCATCGCGCTGGGCTTTGCGGCCTGCGGCGGCGACG
TCTCGATCTGCGCCCGCGAACCTGGGTCGCTCGAGGCGACGCGGGCCGAG
ATCGCCAAGCTCGGCCGCAAGGCCCATGCCGCCAGTGCCGATCTTTCCCA
GGGCGATGCCGTGCGCGGCTACGTGCGCGCGGCCGTCGAGGCCCTCGGCG
GCTGCGACCTGCTGGTCAACAATGCCTCGGCCTTCGGCTCGACGGACGAC
CACAAGGGTTGGACCGACAATCTCGCCGTCGACATGCTGGCGATCGTGCA
CGCCACGCAGGAGGCCTTGCCGGCGCTGAAGCAAAGCCAGGGCAGCGTGG
TGAACATCTCCTCAATTTCCGCGCTCCATCCCGCGGCGCGCCAGCCGCCC
TACGGCGCCATCAAGGCAGCGGTGATCCACTACACGATCACGCAGGCTGC
GATGTATGCGAAGGACCGTATCCGCGTGAACTGCATCGCCCCCGGCTCGG
TCGACTTTCCCGGCGGCGTCTGGGACCGGCGCAAGACCGCCAACGACCCG
ATCTACAAGAACACGCTGGCCTCGATCCCGTTCGGTCGCATGGGCACGCC
GGAAGAAATCGCCAATGTGGCGCTGTTCCTGGCCTCGCCGCTCGCATCGT
GGGTGACCGGGCAGGCCATCGCGGTGGCGGGCGCGCAGGGACTCTGA
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