mRNA_P-wetherbeei_contig6123.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6123.2.1
Unique NamemRNA_P-wetherbeei_contig6123.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A521M879_9HYPH (Class II glutamine amidotransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M879_9HYPH)

HSP 1 Score: 474 bits (1220), Expect = 6.420e-168
Identity = 236/277 (85.20%), Postives = 248/277 (89.53%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQ--DHQVGG--AQEIALLASVPVTAGHWRPLAEGEIVVVSAGELVPS 819
            MCELFCLSSR PTRA+FSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAG+SPWVAFIE+RALAT LLISHIRRAT GANSHANTQPFARELGGRMHLFAHNGGFD IAA+F  +     HRFHP+GETDSE+AFCLLL+RLAPLWKG+ AP L ARLAAVTEFAA MRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRG+ A    ESGVTI   DH      AQE+ALLASVPVTAGHWRPLAEGEIVVV+AGELVPS
Sbjct:    1 MCELFCLSSRRPTRASFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGDSPWVAFIEERALATRLLISHIRRATMGANSHANTQPFARELGGRMHLFAHNGGFDGIAARFDAA----THRFHPLGETDSEMAFCLLLERLAPLWKGAAAPPLAARLAAVTEFAAGMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGHTADAPAESGVTIHSADHHEAHHEAQEMALLASVPVTAGHWRPLAEGEIVVVAAGELVPS 273          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A1F3AH57_9PROT (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3AH57_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 8.660e-143
Identity = 210/276 (76.09%), Postives = 223/276 (80.80%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNA----ATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELVP 816
            MCELF LSSR P  ATFSL  FAAHG P+GRNVDGWGVAFH+GRDIRLYKEPEPAG+SPWVAFIEQRALAT LLISHIRRAT GANSHAN+QPFARELGGRMHLFAHNG FD I  +F  S    + RF PVGETDSE+AFCLLL+RLAPLWKG+ AP+L ARLA V +FAAEMR LGIANFLYSDGEF+FGHGHRRTQADGIVAPPGLW RHRH   A    A      GV I        QEI LLASVPVT G WRPL EGEIVVV+AGELVP
Sbjct:    1 MCELFLLSSRLPAEATFSLCHFAAHGTPNGRNVDGWGVAFHDGRDIRLYKEPEPAGDSPWVAFIEQRALATRLLISHIRRATRGANSHANSQPFARELGGRMHLFAHNGRFDSIDGRFAAS----SRRFLPVGETDSEMAFCLLLERLAPLWKGTAAPSLPARLAVVEDFAAEMRQLGIANFLYSDGEFVFGHGHRRTQADGIVAPPGLWLRHRHCAPAYPDVAGGPARPGVAIATGDAD--QEITLLASVPVTKGDWRPLGEGEIVVVAAGELVP 270          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A521LTS7_9HYPH (Class II glutamine amidotransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LTS7_9HYPH)

HSP 1 Score: 401 bits (1031), Expect = 4.340e-139
Identity = 202/275 (73.45%), Postives = 223/275 (81.09%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPD-GRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGN-AATPAPESGVTIQ--DHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELV 813
            MCELFCLS+R PTRATFSL+RFA HG P  GRNVDGWGVAFHEGRD+RLYKEPEPAG+SP + FIEQ++L T LLISHIRRAT G N+ ANTQPFARELGGRMHLFAHNGGFD I   F  S    AHRF P+G+TDSE AFCLLL+R+APLW+    P L  RLA V  FAAEMRPLGIANFLYSDGEF+FGHGHRRTQADG VAPPGLW RHRH  + AA+    SG+TI   + Q   +QE+ALLASVPVT G WRPLAEGEIVVVSAGEL+
Sbjct:    1 MCELFCLSARRPTRATFSLRRFATHGTPVYGRNVDGWGVAFHEGRDVRLYKEPEPAGDSPLLEFIEQQSLPTKLLISHIRRATVGPNALANTQPFARELGGRMHLFAHNGGFDGIVESFAAS----AHRFRPIGDTDSERAFCLLLERIAPLWESDAVPALGLRLAVVERFAAEMRPLGIANFLYSDGEFVFGHGHRRTQADGNVAPPGLWLRHRHHASPAASTLATSGLTIHPNEQQHHESQEMALLASVPVTTGGWRPLAEGEIVVVSAGELI 271          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: UPI001E586C19 (class II glutamine amidotransferase n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E586C19)

HSP 1 Score: 359 bits (921), Expect = 2.350e-122
Identity = 180/278 (64.75%), Postives = 206/278 (74.10%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAA--------TPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGEL 810
            MCELFCLS+R P RA+FSL++FA HG  D  NVDGWGVAFHEG ++RLYKEPEPA  SPW+ FIE+R L T  L+SHIRRAT G NS ANTQPF RELGGR HLFAHNG   ++  +  +     AHRFHPVG+TDSE AFCLLL+RLAPLW     P L  RL  +  FAAEMRPLG  NFLYSDGEF+FGHGHRR  +DG + P GLWFRHRHR   A        TP  E+GV +  H    AQ+++LLASVPVTAGHWRPLAEGEIVV++AGEL
Sbjct:    1 MCELFCLSARKPMRASFSLRKFAGHGGADTGNVDGWGVAFHEGHEVRLYKEPEPASHSPWLDFIERRTLPTRQLVSHIRRATQGGNSLANTQPFVRELGGRTHLFAHNGDLKDVVTRAAEP----AHRFHPVGQTDSESAFCLLLERLAPLWHRRV-PPLGLRLETLAAFAAEMRPLGTFNFLYSDGEFVFGHGHRRRGSDGSMGP-GLWFRHRHRAEGAHRTGAEHGTPESEAGVAL--HPTDDAQDLSLLASVPVTAGHWRPLAEGEIVVLAAGEL 270          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A1F3AEV8_9PROT (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3AEV8_9PROT)

HSP 1 Score: 329 bits (844), Expect = 9.680e-111
Identity = 168/272 (61.76%), Postives = 196/272 (72.06%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELVP 816
            MCELFCLSSR PTRATFSL+ FAA G   G  VDGWGVA  +GRD+RLYKEPEPA +S W+AF++QRA  + LLISHIR AT G  + +NTQPF RELGGR+H+FAHNG    I  +F         RF PVG+TDSEVAFCLLL+R+APLW+G   P +  RL AV +FAAEMR LG ANFLY DG+ +FGHGHRR QADG + PPGLW   R     A     SGVTI+    G AQ I +LASVP++   WRPLAEGEIVVV+ GE+VP
Sbjct:    1 MCELFCLSSRQPTRATFSLQAFAARGGRGGHMVDGWGVALQDGRDVRLYKEPEPANDSAWLAFLQQRARPSRLLISHIRHATRGGLTLSNTQPFVRELGGRVHVFAHNGRLGGIDERFEGLRG----RFRPVGDTDSEVAFCLLLERMAPLWQGGAEPPVGDRLLAVADFAAEMRALGPANFLYGDGDVVFGHGHRRIQADGSITPPGLWCLGRDCAVDADALAPSGVTIESG--GEAQRITMLASVPLSGEAWRPLAEGEIVVVADGEVVP 266          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A1T4SB71_9HYPH (Glutamine amidotransferase n=2 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SB71_9HYPH)

HSP 1 Score: 324 bits (830), Expect = 3.250e-108
Identity = 163/273 (59.71%), Postives = 195/273 (71.43%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELVPS 819
            MCELFCLSS  PTRATFSLK FAAHGAP GRNVDGWG+AFH+GRD+RLYKEPEPA +S W+ FI+ R L T +LISHIR A  G  + ANTQPF RELGGR H FAHNG  + I  +  +S    + RF PVGETDSE+AFCLLL+R + LW+  + P L  RLA + +FA +MR LG ANFLYSDG+FIFGHGHRRTQA+G + PPGLW   R    A  P   +   +     G  Q IALLASVP+++  W PL EGEIVV++ G ++ S
Sbjct:    1 MCELFCLSSCLPTRATFSLKAFAAHGAPGGRNVDGWGLAFHDGRDVRLYKEPEPATDSSWLGFIQGRHLPTRILISHIRHALGGGVTLANTQPFVRELGGRAHAFAHNGFLNGIQGEVGRS----SARFRPVGETDSEMAFCLLLERFSRLWENGSTPALPLRLAVLAKFAEDMRALGPANFLYSDGDFIFGHGHRRTQANGTIEPPGLWCLQREC--AVDPGAMASAGVNVEPGGETQRIALLASVPLSSERWCPLGEGEIVVLADGRVISS 267          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A849HSW8_9PROT (Class II glutamine amidotransferase n=1 Tax=Acidocella sp. TaxID=50710 RepID=A0A849HSW8_9PROT)

HSP 1 Score: 293 bits (751), Expect = 1.320e-96
Identity = 146/275 (53.09%), Postives = 185/275 (67.27%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEI----AAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELV 813
            MCELF LSS+ PT   FSL  F+ HG   GR +DGWG+AF++G D+RLY+EPEPAG+S WV+FIEQR   T L++SHIRRAT GA S  NTQPF RELGGR H+FAHNG    I    A ++T        RF P+GETDSE+AFC+LL+ L+PLW G   P++ +R+A +  FAA++R LG ANF+Y+DG+ +F HGHRR Q DG +APPGL+   R  G     A  SG+ I D      QE+ L ASVP+TA  W+PL EGE+     G  +
Sbjct:    1 MCELFALSSKMPTNVNFSLDIFSRHGGFGGRMLDGWGLAFYDGADVRLYREPEPAGQSDWVSFIEQRRQRTGLVLSHIRRATRGAVSLRNTQPFMRELGGRAHVFAHNGDLATINQRMAGRWT--------RFQPIGETDSEIAFCILLEALSPLWAGRALPSVASRMAVIEAFAAQLRALGPANFIYADGDVLFAHGHRRIQQDGAIAPPGLFRLTRACGTGDAAAAASGIRIGDEHA--MQELVLFASVPLTAEAWQPLREGEVAAARHGRQI 265          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A7V2W945_9PROT (Class II glutamine amidotransferase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2W945_9PROT)

HSP 1 Score: 286 bits (732), Expect = 1.660e-93
Identity = 149/271 (54.98%), Postives = 185/271 (68.27%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELV 813
            MCEL  LS+R PTR TFSL RFAAHG    ++ DGWGVAF +G D+RLY+EP PA ESP V F+E+   A+ L++SHIRRAT GA +  NT PF RELGGR+H FAHNG  + +  +   +     HRF PVG+TDSE AFCLLL+ LAPLW G + P L ARLA V  FA E+   G ANFLY+DGEF+F HG RR Q DG++ PPGLW   R    A      +G+ ++    G AQ++ALLASVP++   WRPLAEGEI+V+  G +V
Sbjct:    1 MCELLGLSARRPTRLTFSLARFAAHGGRLDQHGDGWGVAFFDGPDLRLYREPAPAAESPLVQFLERCGPASELVVSHIRRATRGAVALRNTHPFVRELGGRLHAFAHNGALEGLRERRPLA----GHRFRPVGDTDSEHAFCLLLEALAPLWDGGS-PPLAARLARVAAFARELCAFGPANFLYADGEFLFAHGDRRRQRDGVIRPPGLWALVRCCREAPDRTEAAGLRVE----GDAQQVALLASVPLSDEDWRPLAEGEILVLERGAIV 262          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: UPI001ACB089D (Glutamine amidotransferase YafJ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=UPI001ACB089D)

HSP 1 Score: 283 bits (723), Expect = 2.120e-92
Identity = 145/271 (53.51%), Postives = 177/271 (65.31%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVTAGHWRPLAEGEIVVVSAGELV 813
            MCELF LSSR PT  +FSL+RFA  G   G+ +DGWG+A+++GRD+RLY+EPEPA +S W+ FI  R   ++L++SHIR AT G  S ANTQPF RE+GGRMH FAHNG    I              + PVGETDSE+A C L  R+A LW+G+  P LK RLA V  FAAE+R LG ANFLY+DGE +  HGHRRTQ+DG + PPGLW   R          E+GV + D    GAQ   L ASVP+T   WR LAEGE V V+ GE +
Sbjct:    1 MCELFALSSRVPTTVSFSLQRFAQRGGLQGKTLDGWGLAYYDGRDLRLYREPEPARDSVWLPFIGSRQAPSTLVVSHIRHATRGGISLANTQPFVREIGGRMHCFAHNGKLSGIDGL----PEFDGGAYTPVGETDSELAACALFARMAGLWRGAEQPALKLRLATVERFAAELRQLGPANFLYADGEILIAHGHRRTQSDGRIEPPGLWMLQRSCDVDPGALAEAGVRVSDGH--GAQRAVLFASVPLTDEPWRALAEGEAVCVAGGEAL 265          
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Match: A0A522Q7L1_9BACT (Class II glutamine amidotransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A522Q7L1_9BACT)

HSP 1 Score: 276 bits (705), Expect = 5.110e-90
Identity = 139/230 (60.43%), Postives = 164/230 (71.30%), Query Frame = 1
Query:    1 MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYKEPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGGRMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAPLWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQADGIVAPPGLWFRHRHRGNAATPAPESGVTI 690
            MCELFCLSSR PTRATFSL+ FA+HGAP    +DGWGVAFH+G D+RLYKEPEPAG+S W+A +E+R +A+ L++SHIRRA  GA + ANTQPF RELGGRMH+FAHNG  D I A+    +      F PVG TDSE+AFCLLLD LAPLW   + P +  RL  VT FAA+MR +G ANFLY+D E +F HG RRTQ DG V PPGL    R     A     +GVTI
Sbjct:    1 MCELFCLSSRVPTRATFSLQTFASHGAPGRAAIDGWGVAFHDGCDVRLYKEPEPAGDSAWLALVERRGVASPLILSHIRRAIRGAITLANTQPFVRELGGRMHVFAHNGRLDGIEARSGADQ-----CFRPVGTTDSELAFCLLLDYLAPLWHAGSIPEIGDRLDRVTRFAADMREMGPANFLYADSEVVFAHGDRRTQTDGSVTPPGLGSLCRKCAVDADALTRAGVTI 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6123.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M879_9HYPH6.420e-16885.20Class II glutamine amidotransferase n=1 Tax=Reyran... [more]
A0A1F3AH57_9PROT8.660e-14376.09Glutamine amidotransferase type-2 domain-containin... [more]
A0A521LTS7_9HYPH4.340e-13973.45Class II glutamine amidotransferase n=1 Tax=Reyran... [more]
UPI001E586C192.350e-12264.75class II glutamine amidotransferase n=2 Tax=Reyran... [more]
A0A1F3AEV8_9PROT9.680e-11161.76Glutamine amidotransferase type-2 domain-containin... [more]
A0A1T4SB71_9HYPH3.250e-10859.71Glutamine amidotransferase n=2 Tax=Enhydrobacter a... [more]
A0A849HSW8_9PROT1.320e-9653.09Class II glutamine amidotransferase n=1 Tax=Acidoc... [more]
A0A7V2W945_9PROT1.660e-9354.98Class II glutamine amidotransferase n=1 Tax=Rhodos... [more]
UPI001ACB089D2.120e-9253.51Glutamine amidotransferase YafJ n=1 Tax=Gammaprote... [more]
A0A522Q7L1_9BACT5.110e-9060.43Class II glutamine amidotransferase n=1 Tax=bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6123contigP-wetherbeei_contig6123:831..1652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1089552.KI911559_gene2052
PFAMsGATase_4
Model size822
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.66e-82
EggNOG OGsCOG0121@1|root,COG0121@2|Bacteria,1QMXU@1224|Proteobacteria,2VGN4@28211|Alphaproteobacteria
Ec32 ortholog descriptionPutative glutamine amidotransferase type 2
Ec32 orthologEc-27_005170.1
DescriptionGlutamine amidotransferases class-II
Cds size822
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186890.0261884-CDS-P-wetherbeei_contig6123:830..16521683186890.0261884-CDS-P-wetherbeei_contig6123:830..1652Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6123 831..1652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6123.2.1prot_P-wetherbeei_contig6123.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6123 831..1652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6123.2.1

>prot_P-wetherbeei_contig6123.2.1 ID=prot_P-wetherbeei_contig6123.2.1|Name=mRNA_P-wetherbeei_contig6123.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MCELFCLSSRHPTRATFSLKRFAAHGAPDGRNVDGWGVAFHEGRDIRLYK
EPEPAGESPWVAFIEQRALATSLLISHIRRATCGANSHANTQPFARELGG
RMHLFAHNGGFDEIAAKFTKSEHHSAHRFHPVGETDSEVAFCLLLDRLAP
LWKGSTAPTLKARLAAVTEFAAEMRPLGIANFLYSDGEFIFGHGHRRTQA
DGIVAPPGLWFRHRHRGNAATPAPESGVTIQDHQVGGAQEIALLASVPVT
AGHWRPLAEGEIVVVSAGELVPS*
back to top

mRNA from alignment at P-wetherbeei_contig6123:831..1652+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6123.2.1 ID=mRNA_P-wetherbeei_contig6123.2.1|Name=mRNA_P-wetherbeei_contig6123.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:831..1652+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCGAACTCTTCTGCCTGTCCAGCCGGCACCCCACCCGTGCCACATT TTCGCTAAAGCGCTTTGCCGCCCACGGCGCGCCTGACGGCCGCAATGTCG ATGGCTGGGGCGTGGCCTTCCACGAGGGTCGCGACATTCGTCTCTACAAG GAGCCGGAACCGGCGGGCGAGAGCCCTTGGGTGGCCTTCATCGAACAGCG TGCGCTGGCGACCAGCCTCCTGATCTCGCATATCAGGCGCGCCACCTGCG GTGCCAATTCCCATGCCAACACCCAGCCCTTTGCACGTGAGTTGGGCGGC CGCATGCACCTCTTCGCGCACAACGGCGGCTTCGACGAGATCGCCGCCAA GTTCACCAAGTCGGAGCACCATTCGGCCCATCGCTTCCACCCCGTCGGTG AGACCGATTCAGAGGTGGCCTTCTGTCTCCTGCTGGATCGCCTGGCGCCT TTGTGGAAGGGCTCCACGGCCCCGACGCTAAAGGCGCGGCTCGCCGCCGT GACGGAATTCGCTGCCGAGATGCGGCCGCTCGGTATCGCCAACTTCCTCT ACAGCGACGGCGAATTCATCTTCGGCCACGGCCATCGCCGCACCCAGGCC GACGGCATCGTGGCGCCGCCGGGTCTGTGGTTCCGCCATCGTCATCGTGG CAACGCCGCGACACCTGCGCCAGAATCAGGTGTCACCATCCAAGATCACC AGGTGGGCGGGGCCCAGGAGATAGCGCTGCTCGCCAGCGTGCCCGTGACC GCGGGCCACTGGCGGCCGCTCGCCGAGGGCGAGATCGTCGTCGTATCCGC CGGCGAACTCGTGCCCTCTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6123:831..1652+

>mRNA_P-wetherbeei_contig6123.2.1 ID=mRNA_P-wetherbeei_contig6123.2.1|Name=mRNA_P-wetherbeei_contig6123.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig6123:831..1652+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCGAACTCTTCTGCCTGTCCAGCCGGCACCCCACCCGTGCCACATT
TTCGCTAAAGCGCTTTGCCGCCCACGGCGCGCCTGACGGCCGCAATGTCG
ATGGCTGGGGCGTGGCCTTCCACGAGGGTCGCGACATTCGTCTCTACAAG
GAGCCGGAACCGGCGGGCGAGAGCCCTTGGGTGGCCTTCATCGAACAGCG
TGCGCTGGCGACCAGCCTCCTGATCTCGCATATCAGGCGCGCCACCTGCG
GTGCCAATTCCCATGCCAACACCCAGCCCTTTGCACGTGAGTTGGGCGGC
CGCATGCACCTCTTCGCGCACAACGGCGGCTTCGACGAGATCGCCGCCAA
GTTCACCAAGTCGGAGCACCATTCGGCCCATCGCTTCCACCCCGTCGGTG
AGACCGATTCAGAGGTGGCCTTCTGTCTCCTGCTGGATCGCCTGGCGCCT
TTGTGGAAGGGCTCCACGGCCCCGACGCTAAAGGCGCGGCTCGCCGCCGT
GACGGAATTCGCTGCCGAGATGCGGCCGCTCGGTATCGCCAACTTCCTCT
ACAGCGACGGCGAATTCATCTTCGGCCACGGCCATCGCCGCACCCAGGCC
GACGGCATCGTGGCGCCGCCGGGTCTGTGGTTCCGCCATCGTCATCGTGG
CAACGCCGCGACACCTGCGCCAGAATCAGGTGTCACCATCCAAGATCACC
AGGTGGGCGGGGCCCAGGAGATAGCGCTGCTCGCCAGCGTGCCCGTGACC
GCGGGCCACTGGCGGCCGCTCGCCGAGGGCGAGATCGTCGTCGTATCCGC
CGGCGAACTCGTGCCCTCTTAG
back to top