mRNA_P-wetherbeei_contig6122.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: D8LMA4_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA4_ECTSI) HSP 1 Score: 162 bits (411), Expect = 3.780e-47 Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 13 GVVLSKAAAHTAPELTLS-RDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
GVV+S++A AP+LT+ +DQLTV G KGFRM+RAT GV +G WYWE L PE + HCR GWS G+LQ PVGYD+ SYAYRDIAGSKVHDS R DNYGEPWGPGDV
Sbjct: 85 GVVISRSAEDCAPQLTMPHKDQLTVTGHKGFRMARATKGVSNGTWYWECAVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSHRSDNYGEPWGPGDV 195
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A6H5JYI9_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI9_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.050e-44 Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 13 GVVLSKAAAHTAPELTLS-RDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
GVV+S++A AP+LT+ +DQLTV G KGFRM+RAT GV +G WYWE L PE + HCR GWS G+LQ PVGYD+ SYAYRDIAGSKVHDS R DNYGEPWGPGDV
Sbjct: 87 GVVISRSAEDCAPQLTMPHKDQLTVTGHKGFRMARATKGVSNGTWYWECTVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSLRSDNYGEPWGPGDV 197
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A835YSC8_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC8_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.310e-43 Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 13 GVVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
GV LS+ AP+L LS+DQLTV G+KGFRM RAT G +G WY+E++ L P + D H R GWST G+LQAPVGYDR SYAYRD+AGS+VH S R+D YG P+GPGDV
Sbjct: 1 GVALSRT--DCAPQLMLSKDQLTVTGEKGFRMVRATAGASEGAWYFEVLVLPPARADGHVRIGWSTGAGDLQAPVGYDRHSYAYRDLAGSRVHASLRHDGYGAPYGPGDV 108
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A7S0TCR8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TCR8_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.400e-30 Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 46 APELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDS-HCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
A +L++S+D L++ GDKG+RM+RA +GV +G WY+E V E + D H R GW+T ELQA VG+DR + YRD AGS HDS R DNYGE +GPGDV
Sbjct: 19 ASQLSVSKDGLSLTGDKGYRMARAVIGVSEGCWYFESVIGESKNGDQGHYRVGWATKEAELQASVGFDRFGFGYRDTAGSLCHDSNREDNYGEAYGPGDV 118
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: UPI00064D8D25 (protein TRAUCO-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064D8D25) HSP 1 Score: 106 bits (264), Expect = 1.190e-26 Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 16 VVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
+ LSK H A ++ LS D++T + KG+RM RAT GV +G WY+E+ + + H R GWSTD+G+LQAPVGYD S+ YRDI GSKVH + RY GE + GDV
Sbjct: 21 ICLSKV--HKAEKVELSDDRMTASSTKGYRMVRATRGVVEGAWYFEIKVVRLGET-GHTRLGWSTDKGDLQAPVGYDGNSFGYRDIDGSKVHKALRYKYGGEGYKEGDV 126
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A4D9CPG9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPG9_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.070e-26 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 40 HTAPELTLSRDQLTVAGDK-GFRMSRATLGVDDGNWYWELVCLEP------------------EKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
+AP+L LSRD + V G + G+RM++ + V GNWYWE LE E+ H R GW+T +G LQAPVGYD+ S+ YRD+AGSK+H +R D YGE +GPGDV
Sbjct: 80 ESAPQLFLSRDLMEVTGCRAGYRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFRVGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDV 199
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A482ULD5_9ARCH (B30.2/SPRY domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ULD5_9ARCH) HSP 1 Score: 104 bits (260), Expect = 3.060e-26 Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 106 MSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
M RAT GV +G++YWE L D+H R GWST GELQAPVGYD+ SYAYRDIAGS VH S R D YGE +G GDV
Sbjct: 1 MVRATHGVHEGSYYWEAEVLPSLGDDAHVRIGWSTREGELQAPVGYDQHSYAYRDIAGSMVHKSTRIDEYGEAYGVGDV 79
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: W7TV98_9STRA (Set1 ash2 histone methyltransferase complex subunit ash2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV98_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.010e-25 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 40 HTAPELTLSRDQLTVAGDK-GFRMSRATLGVDDGNWYWELVCLEP------------------EKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
+AP+L LSRD + V G + G+RM++ + V GNWYWE LE E+ H R GW+T +G LQAPVGYD+ S+ YRD+AGSK+H +R D YGE +GPGDV
Sbjct: 80 ESAPQLFLSRDLMEVTGCRAGYRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFRVGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDV 199
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A7S2MZN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MZN0_9EUKA) HSP 1 Score: 100 bits (248), Expect = 5.190e-25 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 76 LTVAGDKGFRMSRATLGVDDGNWYWEL-VCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGDV 342
LT G KG+RM RAT GV G +++E+ VC D H R GW T+ G++QAPVGYD+ SY+YRD+ GSK H+S D YGE +GPGDV
Sbjct: 8 LTAIGYKGYRMVRATHGVSRGTYFYEVKVCDSLNSEDGHARIGWCTESGDVQAPVGYDQNSYSYRDVNGSKFHESIGTD-YGEAYGPGDV 96
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Match: A0A176VX76_MARPO (B30.2/SPRY domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VX76_MARPO) HSP 1 Score: 107 bits (267), Expect = 7.470e-25 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 40 HTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWELVCLEPEKPDSHCRAGWSTDRGELQAPVGYDRRSYAYRDIAGSKVHDSQRYDNYGEPWGPGD 339
H A ++ LS D+LT +G KG+RM RAT GV +G WY+E++ ++ H R GWS+ RG++QAPVGYD SYAYRD+ GSKVH + R + YGEP+ GD
Sbjct: 181 HKAEKIELSLDRLTASGSKGYRMVRATRGVVEGAWYFEII-VQNLGLTGHTRLGWSSRRGDIQAPVGYDAHSYAYRDVDGSKVHCALR-EPYGEPYVEGD 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6122.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6122.1.1 >prot_P-wetherbeei_contig6122.1.1 ID=prot_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp MSLQGVVLSKAAAHTAPELTLSRDQLTVAGDKGFRMSRATLGVDDGNWYWback to top mRNA from alignment at P-wetherbeei_contig6122:3..687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6122.1.1 ID=mRNA_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=685bp|location=Sequence derived from alignment at P-wetherbeei_contig6122:3..687- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6122:3..687- >mRNA_P-wetherbeei_contig6122.1.1 ID=mRNA_P-wetherbeei_contig6122.1.1|Name=mRNA_P-wetherbeei_contig6122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig6122:3..687- (Phaeothamnion wetherbeei SAG_119_79)back to top |