mRNA_P-wetherbeei_contig6119.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6119.1.1
Unique NamemRNA_P-wetherbeei_contig6119.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: UPI001F582308 (hypothetical protein n=1 Tax=unclassified Sphingomonas TaxID=196159 RepID=UPI001F582308)

HSP 1 Score: 137 bits (346), Expect = 1.790e-36
Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 1
Query:   10 KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDETA-HVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRS------SSRVNLGK-RHVPIVHAPLEERHIAHVKKHVDVSIENFVG 657
            +IQIFG+RCSGT  +A+ L +N     +T E G KH+F     +  +DT   L +V+ RD   W RS+  QP+H H +L+   FD F++ EW   +DE   H+ P  P  G+EML ERDPET  RF N +  R+AK+R +  L     N  L++Y+  V +P+ ++  +    G+  +      SS    G  R+ P  +A L    +AH+++ +D ++E   G
Sbjct:   27 RIQIFGQRCSGTNVVAQTLATNLPGARVTDEFGHKHWFVPPQTLFPKDT---LTLVVARDAFDWARSLHRQPWHAHPTLKAKPFDAFVRSEWYSCWDEHVDHIEPGHPLLGTEMLHERDPETGARFANCIAKRTAKLRHWAALPARAHNVALVSYDAFVRAPEQLVQSIAAATGIAPAAHFAPVSSYKGQGHFRYAPQRYADLCPEDVAHIERWLDPAVEAQYG 247          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: UPI0012E3AAD8 (hypothetical protein n=2 Tax=Aureimonas sp. AU20 TaxID=1349819 RepID=UPI0012E3AAD8)

HSP 1 Score: 135 bits (339), Expect = 1.000e-35
Identity = 78/227 (34.36%), Postives = 121/227 (53.30%), Query Frame = 1
Query:   10 KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYD-ETAHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNL----GKRHVPIV---HAPLEERHIAHVKKHVDVSIENFVGYEI 666
            ++QIFG+RCSGT  L +L+ +NF    IT   GFKH+F      Q     +VL +V+ RD   W+RS+  QP+H H  L+ ++F +F++ EW   +D E   + PR P FG EML ERDP T+ RF N +  R+AK+R++ +L     +  L+    L ++P VV++ +    G    +    L    G    P     + PL    +  V+  +D  +E+  GY+I
Sbjct:    3 QVQIFGQRCSGTNVLRKLVSTNFGAEAITDFYGFKHWFVPE---QILFPANVLIMVVARDPFDWIRSLHRQPWHAHPDLKTLAFSQFLRAEWHSYWDAEFGGIEPRHPLFGREMLHERDPATRLRFANALRKRAAKLRSWSELTTRCNHLALLDQAVLASTPHVVLDALAQALGRAHQADLTALQSYKGNGLTPFQPRRYDPLTPEDVDFVRSQLDPDVEHLFGYDI 226          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A4Q0GR39_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas sp. UV9 TaxID=1851410 RepID=A0A4Q0GR39_9SPHN)

HSP 1 Score: 135 bits (340), Expect = 1.590e-35
Identity = 80/228 (35.09%), Postives = 118/228 (51.75%), Query Frame = 1
Query:    1 MPI-KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDET-AHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNL----GKRHVPIV---HAPLEERHIAHVKKHVDVSIENFVG 657
            +PI ++QI+G+RCSGT  +AR + +N   V IT   GFKH+F     +  +DT   L +V+ RD   W RS+  QP+H H  L+  +FD FI+ +W   +D+   H+ P  P  G EML ERDPET +RF N +  R+AK+R +  L +   N  L+ Y+     P V +  +    GL R    V +    G+ H P V   +  L      H+   +D  +E   G
Sbjct:   28 VPITRVQIYGQRCSGTNLVARAIEANLPGVEITEAFGFKHWFVPPQTLFVKDT---LVLVVARDAYDWARSLHRQPWHAHPELKAKAFDAFIRSDWHSYWDDHFGHIEPGHPMHGDEMLHERDPETGKRFANCIAKRTAKLRHWSALTNRAHNVALLGYDAFARDPAVFVTALAETTGLDRRDPFVPITSYKGQGHAPYVPTAYPDLAAADAEHIGAWLDPEVEAAFG 252          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A0S2EWJ3_9HYPH (Uncharacterized protein n=2 Tax=unclassified Aureimonas TaxID=2615206 RepID=A0A0S2EWJ3_9HYPH)

HSP 1 Score: 135 bits (339), Expect = 2.410e-35
Identity = 78/227 (34.36%), Postives = 121/227 (53.30%), Query Frame = 1
Query:   10 KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYD-ETAHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNL----GKRHVPIV---HAPLEERHIAHVKKHVDVSIENFVGYEI 666
            ++QIFG+RCSGT  L +L+ +NF    IT   GFKH+F      Q     +VL +V+ RD   W+RS+  QP+H H  L+ ++F +F++ EW   +D E   + PR P FG EML ERDP T+ RF N +  R+AK+R++ +L     +  L+    L ++P VV++ +    G    +    L    G    P     + PL    +  V+  +D  +E+  GY+I
Sbjct:   37 QVQIFGQRCSGTNVLRKLVSTNFGAEAITDFYGFKHWFVPE---QILFPANVLIMVVARDPFDWIRSLHRQPWHAHPDLKTLAFSQFLRAEWHSYWDAEFGGIEPRHPLFGREMLHERDPATRLRFANALRKRAAKLRSWSELTTRCNHLALLDQAVLASTPHVVLDALAQALGRAHQADLTALQSYKGNGLTPFQPRRYDPLTPEDVDFVRSQLDPDVEHLFGYDI 260          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A2T5H2P7_9SPHN (Uncharacterized protein n=4 Tax=unclassified Sphingomonas TaxID=196159 RepID=A0A2T5H2P7_9SPHN)

HSP 1 Score: 132 bits (332), Expect = 2.590e-34
Identity = 78/228 (34.21%), Postives = 115/228 (50.44%), Query Frame = 1
Query:    1 MPI-KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDET-AHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNL----GKRHVPIV---HAPLEERHIAHVKKHVDVSIENFVG 657
            +PI ++QI+G+RCSGT  + R + +N   + IT   GFKH+F     +  +DT   L +V+ RD   W RS+  QP+H H  L+   FD FI+  W   +D+   H+ P  P  G EML ERDPET ERF N +  R+AK+R +  L +   N  L+ Y+     P   +  +    G+      V +    G+ H P V   + PLE     H+   +D  +E   G
Sbjct:   30 VPITRVQIYGQRCSGTNLVTRAIEANMPGIEITEAFGFKHWFVPPQTLFVKDT---LVLVVARDAFDWARSLHRQPWHAHPDLKAQPFDIFIRSHWHSYWDDHFGHIEPGHPMQGGEMLHERDPETGERFANCIAKRTAKLRHWSTLTNRAHNVALLGYDAFARDPGAFVTALGAAAGIACREPFVPITSYKGQGHAPYVPTPYLPLESDDAEHITAWLDPEVEAAFG 254          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A0Q4EPE4_9SPHN (Uncharacterized protein n=8 Tax=Sphingomonas TaxID=13687 RepID=A0A0Q4EPE4_9SPHN)

HSP 1 Score: 132 bits (332), Expect = 3.460e-34
Identity = 75/228 (32.89%), Postives = 115/228 (50.44%), Query Frame = 1
Query:    1 MPI-KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDET-AHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNLGKR-------HVPIVHAPLEERHIAHVKKHVDVSIENFVG 657
            +PI ++Q++G+RCSGT  + R + +N  +V IT E GFKH+F     +  +DT   L +V+ RD   W RS+  QP+H H  L+   FD FI+ +W   +D+    + P  P  G EML ERDPET ERF N +  R+AK+R +  L +   N  L+ Y+    +P   +  +    G+ R    V +          +VP  +  L      H+   +D  +E   G
Sbjct:   29 VPITRVQVYGQRCSGTNLVTRAIEANMPSVTITEEFGFKHWFVPPQTLFVKDT---LVLVVARDAFDWTRSLHRQPWHAHPDLKAQPFDAFIRSQWHSYWDDHFGPIEPGHPMQGDEMLHERDPETGERFANCIAKRTAKLRHWASLTNRTHNVALLGYDAFARAPSAFVEALSEATGIPRREEYVPITSYKGQGYAPYVPTAYPELAPADAEHITAWLDPEVEAAFG 253          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A7C1P5G2_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1P5G2_9BACT)

HSP 1 Score: 130 bits (328), Expect = 4.300e-34
Identity = 69/178 (38.76%), Postives = 101/178 (56.74%), Query Frame = 1
Query:    4 PIKIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDETAHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKR 537
            P ++QIFGERCSGT Y+A+LL  N   V +T E G+KH F +R      D     FVV+VRD   W++S+  +P+H   SLR  S  +F++  W C +     +P  DPR G+EM  ERDP T E F NV+ +R  K+R +L L + V ++  + YE+ V+    V+  +      +R
Sbjct:    6 PDRLQIFGERCSGTNYVAQLLRRNL-RVSLTDEYGWKHGFSERV----VDDPGCAFVVVVRDPFDWVQSLHRRPWHAAASLRDCSLAQFVRTPWVCEWGRDMELPADDPRIGAEMRHERDPATGEPFANVMRLRIGKLRDWLTLAERVRHFAWVRYEDAVSDERGVVRRLADELDCRR 178          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A0Q4JZC2_9SPHN (Uncharacterized protein n=5 Tax=Sphingomonas TaxID=13687 RepID=A0A0Q4JZC2_9SPHN)

HSP 1 Score: 131 bits (329), Expect = 7.400e-34
Identity = 77/228 (33.77%), Postives = 116/228 (50.88%), Query Frame = 1
Query:    1 MPI-KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDET-AHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNL----GKRHVPIVHAP---LEERHIAHVKKHVDVSIENFVG 657
            +PI ++QI+G+RCSGT  + R + +N     IT   GFKH+F     +  +DT   L +V+ R+   W RS+  QP+H H  L+   FD FI+  W   +D+   H+ P  P +G+EML ERDPET ERF N +  R+AK+R +  L +   N  L+ Y+     P   +  +    G  R  S V +    G+ + P V  P   L      H+   +D ++E   G
Sbjct:   18 VPITRVQIYGQRCSGTNLVTRAIEANMPGAEITEAFGFKHWFVPPQTLFVKDT---LVLVVARNAYDWARSLHRQPWHAHPELKAKPFDAFIRSHWHSYWDDHFGHIEPGHPMYGNEMLHERDPETGERFANCIAKRTAKLRHWSSLTNRAHNVALLGYDAFTRDPAAFVAALAEATGFARHESYVPITSYKGQGYAPYVPTPYPDLAPADAEHIAAWLDPAVEAEFG 242          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: UPI00028A3758 (hypothetical protein n=2 Tax=unclassified Sphingomonas TaxID=196159 RepID=UPI00028A3758)

HSP 1 Score: 131 bits (330), Expect = 8.280e-34
Identity = 77/224 (34.38%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   10 KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDETA-HVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRS------SSRVNLGK-RHVPIVHAPLEERHIAHVKKHVDVSIENFVG 657
            ++QI+G+RCSGT  +A+ L +N   + +T   G KH+F     +   DT SV   V+ RD   W+RS+  QP+H H  L+   F  F++ EW   +DE   H+ P  P  G EML ERDP T ERF N +  R+AK+R +  L     N  L++Y+  + +P+ V+  + T  GL+R+      +S    G   +VP  +  L    +AH++  +D ++E   G
Sbjct:   50 RMQIYGQRCSGTNIVAQTLAANIPELQLTDAFGHKHWFVAAQTLFPADTLSV---VVARDAFDWVRSLHRQPWHAHPDLKAKPFAAFVRSEWNSCWDEHFDHIEPGHPLLGQEMLHERDPATGERFANCIAKRTAKLRHWADLPMRAHNVALVSYDGFMRAPEAVVAALATATGLERTPIFQTVTSYKGQGFFAYVPQRYDDLAPADVAHIEGWLDPAVEAQYG 270          
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Match: A0A4R2TLX0_9SPHN (Uncharacterized protein n=4 Tax=Sphingomonas TaxID=13687 RepID=A0A4R2TLX0_9SPHN)

HSP 1 Score: 131 bits (329), Expect = 9.640e-34
Identity = 77/228 (33.77%), Postives = 113/228 (49.56%), Query Frame = 1
Query:    1 MPI-KIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQDTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYDET-AHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVENYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNLGKR-------HVPIVHAPLEERHIAHVKKHVDVSIENFVG 657
            +PI ++QI+G+RCSGT  + R + +N   V IT   GFKH+F     +  +DT   L +V+ RD   W RS+  QP+H H  L+   FD FI+ +W   +D+   H+ P  P  G EML ERDPET ERF N +  R+AK+R +  L +   N  L+ Y+     P   ++ +    GL      V +          +VP  +  L      H+   +D  IE   G
Sbjct:   29 VPITRVQIYGQRCSGTNLVTRAIEANMPGVEITETFGFKHWFVPPQTLFVKDT---LVLVVARDAYDWARSLHRQPWHAHPELKAKPFDAFIRSDWHSYWDDHFGHIEPGHPMHGDEMLHERDPETGERFANCIAKRTAKLRHWSSLTNRAHNVALLGYDAFARDPAAFVSALAAAAGLVHHPQFVPITSYKGQGYAPYVPTAYPDLAAADAEHIAAWLDPEIEAAFG 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6119.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F5823081.790e-3635.27hypothetical protein n=1 Tax=unclassified Sphingom... [more]
UPI0012E3AAD81.000e-3534.36hypothetical protein n=2 Tax=Aureimonas sp. AU20 T... [more]
A0A4Q0GR39_9SPHN1.590e-3535.09Uncharacterized protein n=1 Tax=Sphingomonas sp. U... [more]
A0A0S2EWJ3_9HYPH2.410e-3534.36Uncharacterized protein n=2 Tax=unclassified Aurei... [more]
A0A2T5H2P7_9SPHN2.590e-3434.21Uncharacterized protein n=4 Tax=unclassified Sphin... [more]
A0A0Q4EPE4_9SPHN3.460e-3432.89Uncharacterized protein n=8 Tax=Sphingomonas TaxID... [more]
A0A7C1P5G2_9BACT4.300e-3438.76Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A0A0Q4JZC2_9SPHN7.400e-3433.77Uncharacterized protein n=5 Tax=Sphingomonas TaxID... [more]
UPI00028A37588.280e-3434.38hypothetical protein n=2 Tax=unclassified Sphingom... [more]
A0A4R2TLX0_9SPHN9.640e-3433.77Uncharacterized protein n=4 Tax=Sphingomonas TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6119contigP-wetherbeei_contig6119:127..795 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1112216.JH594425_gene3296
Model size669
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.36e-34
EggNOG OGs28IX8@1|root,2Z8V7@2|Bacteria,1ND9S@1224|Proteobacteria,2U2D1@28211|Alphaproteobacteria
Cds size669
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186889.584835-CDS-P-wetherbeei_contig6119:126..7951683186889.584835-CDS-P-wetherbeei_contig6119:126..795Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6119 127..795 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6119.1.1prot_P-wetherbeei_contig6119.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6119 127..795 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6119.1.1

>prot_P-wetherbeei_contig6119.1.1 ID=prot_P-wetherbeei_contig6119.1.1|Name=mRNA_P-wetherbeei_contig6119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp
MPIKIQIFGERCSGTKYLARLLLSNFSNVVITSECGFKHFFPDRTHIQDQ
DTTSVLFVVIVRDYKTWLRSMWAQPYHVHCSLRGVSFDKFIKKEWRCVYD
ETAHVPPRDPRFGSEMLFERDPETQERFKNVVEMRSAKMRAFLQLRDLVE
NYVLITYEELVASPDVVINFMQTRFGLKRSSSRVNLGKRHVPIVHAPLEE
RHIAHVKKHVDVSIENFVGYEI*
back to top

mRNA from alignment at P-wetherbeei_contig6119:127..795+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6119.1.1 ID=mRNA_P-wetherbeei_contig6119.1.1|Name=mRNA_P-wetherbeei_contig6119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig6119:127..795+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAATCAAAATTCAGATCTTTGGGGAAAGATGCTCGGGCACAAAGTA CCTAGCAAGGCTACTGTTGTCAAACTTTTCAAACGTTGTAATCACCAGTG AATGTGGATTCAAACACTTCTTCCCAGACAGAACGCACATCCAGGACCAA GACACCACATCTGTATTATTCGTGGTCATTGTGCGCGACTACAAAACGTG GCTAAGGTCAATGTGGGCCCAACCGTACCACGTGCATTGTTCGCTACGCG GCGTCAGCTTTGACAAGTTCATAAAGAAAGAATGGCGATGTGTCTACGAC GAGACCGCGCATGTCCCTCCACGGGACCCGCGGTTTGGATCGGAAATGCT ATTTGAAAGGGACCCTGAGACGCAAGAGAGGTTCAAAAACGTTGTGGAAA TGAGATCAGCCAAGATGCGCGCGTTCCTTCAGCTTCGTGATCTCGTCGAA AACTACGTGCTCATCACTTACGAAGAACTCGTGGCATCTCCTGATGTCGT AATCAACTTCATGCAGACACGTTTTGGTCTGAAGCGCTCTTCCAGCCGGG TGAATCTGGGAAAGAGACACGTTCCCATAGTACATGCTCCGCTTGAGGAG CGTCACATTGCACACGTGAAGAAGCACGTCGACGTCAGCATCGAAAACTT TGTGGGGTACGAAATTTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6119:127..795+

>mRNA_P-wetherbeei_contig6119.1.1 ID=mRNA_P-wetherbeei_contig6119.1.1|Name=mRNA_P-wetherbeei_contig6119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig6119:127..795+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAATCAAAATTCAGATCTTTGGGGAAAGATGCTCGGGCACAAAGTA
CCTAGCAAGGCTACTGTTGTCAAACTTTTCAAACGTTGTAATCACCAGTG
AATGTGGATTCAAACACTTCTTCCCAGACAGAACGCACATCCAGGACCAA
GACACCACATCTGTATTATTCGTGGTCATTGTGCGCGACTACAAAACGTG
GCTAAGGTCAATGTGGGCCCAACCGTACCACGTGCATTGTTCGCTACGCG
GCGTCAGCTTTGACAAGTTCATAAAGAAAGAATGGCGATGTGTCTACGAC
GAGACCGCGCATGTCCCTCCACGGGACCCGCGGTTTGGATCGGAAATGCT
ATTTGAAAGGGACCCTGAGACGCAAGAGAGGTTCAAAAACGTTGTGGAAA
TGAGATCAGCCAAGATGCGCGCGTTCCTTCAGCTTCGTGATCTCGTCGAA
AACTACGTGCTCATCACTTACGAAGAACTCGTGGCATCTCCTGATGTCGT
AATCAACTTCATGCAGACACGTTTTGGTCTGAAGCGCTCTTCCAGCCGGG
TGAATCTGGGAAAGAGACACGTTCCCATAGTACATGCTCCGCTTGAGGAG
CGTCACATTGCACACGTGAAGAAGCACGTCGACGTCAGCATCGAAAACTT
TGTGGGGTACGAAATTTAA
back to top