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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3378 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Cds size | 2919 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186888.4562886-UTR-P-wetherbeei_contig61:6601..6750 | 1683186888.4562886-UTR-P-wetherbeei_contig61:6601..6750 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig61 6602..6750 - |
| 1683186888.4722242-UTR-P-wetherbeei_contig61:9669..9979 | 1683186888.4722242-UTR-P-wetherbeei_contig61:9669..9979 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig61 9670..9979 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186888.4643877-CDS-P-wetherbeei_contig61:6750..9669 | 1683186888.4643877-CDS-P-wetherbeei_contig61:6750..9669 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig61 6751..9669 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig61.6.1 >prot_P-wetherbeei_contig61.6.1 ID=prot_P-wetherbeei_contig61.6.1|Name=mRNA_P-wetherbeei_contig61.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=973bp
MQDSEPARRPGSHRSYGSVLTTATALLLLPTCDGVGQPWSHAGGYYPPHG
AGNGNPTPENGRGGDGSFWNPQQDDQGAWPPQQWHGAPQRQYGAPGYGPP
SSGYPSQPDGPALGSRFRGLLNRAKDKVKELSNDLIGTNMGDGGPAQYGG
GGGGGGGGGSYGPPGPAPGYRPGDYPPAVSQGQYSAAGGGEYGAMPPVSP
PYGYPQQQSQGQCYGEEFRQDGGPDAPQSPPLQQQQPQPQQQPSYQTNPQ
YQWGQGESDINGAWNGGSNGAPAAPGGRSGGDNVNGGSGSSGSRSSEGWT
RGYDAGAPAAAGAGGYRQRWSTEEFAADAWSRAGAGNTPAQLRAAGDGAA
AGDGSWLPPAHWEMPAPGSRPTWETASEYQSGGAASAQAGVSSDGERPAA
AAVAAAPSSSSAAVDPMASTRCALGNLPAASADGQNSTIGTVAEEAVSGV
AGITADSAWFTRPPQAFGSGARQPRTGVSAAAAAGDRYGFTSGNAAASSD
GCAGVDEEEEKESVGEASSLGQRGMSTAARLAVQGSRGATAAAGGDALPS
VGVGYDTAWRECETVDDDADVANTTAASVSDAEEGVAVPPAASGSETKMP
AAAAPAAENTGVAEAAPAALENEPNRTTESLEAAAAAKMAAGSFGDTYGF
SIGAVSAYDPLCEAEGSELPADDLAVKEPSASPSQTTDAATAAASTAGSS
CEEPGWTSSAHNGADEMHWMRPLEGGAYNQEAQQTPPARSLHSGRVPPPP
WWHERQRQTALSSQQGERQRQHQDEQLAHFGEQPRPTTWQHQEESGSAAP
STMAAGPAPAEASSLGGGPAAAGAGKAPWWAATGPPRQIDGFQDADEGDA
SGGFTAGVARMGSSTESDRRPAAFAGMPGRSDGGSDGGGGTGAAAPRGVR
STNRPAGADVHGPPKRMEPSAASAQYGEKEAKGDGEAWNDWDLQDQLDNY
WRQIRSSSSPDGLRRGDGGSGG* back to topmRNA from alignment at P-wetherbeei_contig61:6602..9979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig61.6.1 ID=mRNA_P-wetherbeei_contig61.6.1|Name=mRNA_P-wetherbeei_contig61.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3378bp|location=Sequence derived from alignment at P-wetherbeei_contig61:6602..9979- (Phaeothamnion wetherbeei SAG_119_79)
CTTTTCATGCGGACACTGAAAGGGAAAACAAACTGCACTGAATCGAGCTT
CTTATTCGCTGCCTTTCCCCGCTGTCCTTGCTCTGTAAGCCCACCAACTT
TCAGTTTTCAAAGTGGAAGTGTCTCATGTGCACAAATCCCCTTCTTCGAG
GAAAGCGGAACTGCTGGCAGGATAACCGAGTATCTTCTCTTGCTCTGCCG
CGCACCATATCCTCTGTTCCGTGAATTACCCAAAACAACTGCGGGTTCAT
GACCTTTCCTCTTCCTCCCAGTGTCTTCTCCATTTTACGCTCACAGGTAA
TTCAAGGAAGATGCAAGACTCCGAGCCTGCAAGACGGCCTGGAAGTCACA
GGTCATATGGCAGCGTGCTGACAACGGCGACTGCGCTCCTCCTCTTGCCC
ACATGCGACGGTGTTGGGCAGCCGTGGAGCCACGCTGGTGGCTACTACCC
TCCTCACGGCGCGGGCAACGGAAATCCGACGCCGGAAAACGGACGAGGAG
GCGATGGCAGCTTTTGGAATCCGCAGCAGGACGACCAAGGAGCATGGCCG
CCGCAGCAATGGCACGGAGCGCCGCAGCGGCAATACGGTGCCCCGGGCTA
CGGCCCGCCATCTTCTGGCTACCCGTCGCAGCCTGACGGCCCGGCGCTGG
GCTCGCGTTTCAGAGGCCTTCTCAACCGCGCCAAGGACAAGGTGAAGGAG
CTTTCCAATGACCTCATTGGAACCAATATGGGCGACGGCGGACCCGCACA
GTACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGTCGTACGGGCCGC
CCGGCCCCGCGCCTGGCTACAGGCCCGGCGACTATCCGCCCGCAGTATCA
CAAGGCCAGTACAGCGCAGCAGGAGGAGGAGAGTACGGCGCAATGCCACC
GGTGTCGCCGCCGTATGGCTACCCGCAGCAGCAAAGCCAGGGCCAATGCT
ACGGCGAGGAGTTCCGGCAAGATGGTGGCCCCGATGCCCCGCAATCGCCG
CCGCTGCAACAACAGCAGCCGCAGCCACAGCAGCAGCCCTCGTACCAGAC
GAATCCCCAATATCAATGGGGCCAGGGCGAAAGCGACATCAACGGAGCTT
GGAATGGCGGTAGTAACGGTGCCCCGGCCGCCCCCGGCGGTCGCAGCGGC
GGCGACAACGTCAATGGCGGTAGTGGCAGCAGTGGCAGCAGAAGCAGCGA
AGGGTGGACGCGAGGCTACGATGCCGGCGCGCCAGCCGCGGCTGGCGCTG
GCGGCTATCGGCAACGTTGGAGCACGGAGGAGTTTGCCGCCGACGCATGG
AGCCGCGCCGGCGCTGGGAACACGCCTGCCCAACTCAGGGCTGCTGGCGA
CGGCGCGGCTGCGGGGGATGGTTCATGGTTGCCGCCCGCTCACTGGGAAA
TGCCTGCACCGGGCTCCCGTCCAACGTGGGAGACCGCATCCGAATATCAG
AGTGGCGGAGCAGCAAGCGCGCAAGCTGGCGTTTCGTCGGACGGAGAGCG
GCCAGCGGCGGCGGCGGTGGCGGCGGCGCCGTCGTCGTCATCGGCGGCTG
TGGATCCAATGGCTTCTACTCGCTGCGCGTTGGGAAACTTGCCGGCGGCA
TCTGCTGACGGCCAAAACTCGACTATTGGAACTGTGGCGGAAGAAGCGGT
CTCTGGAGTGGCAGGAATCACTGCGGATTCTGCGTGGTTCACACGCCCGC
CGCAGGCCTTTGGCAGCGGCGCCAGACAACCACGCACGGGTGTCTCTGCG
GCAGCGGCGGCAGGAGACCGCTATGGCTTCACCAGCGGGAATGCAGCTGC
TTCCAGCGACGGCTGCGCTGGGGTTGACGAGGAAGAGGAGAAGGAATCGG
TAGGGGAAGCGTCGAGCCTCGGCCAGCGCGGCATGTCCACAGCGGCACGA
CTGGCGGTGCAAGGGAGCAGGGGCGCGACAGCCGCGGCCGGCGGAGACGC
TTTGCCATCGGTCGGCGTCGGATACGACACTGCCTGGAGAGAATGCGAGA
CGGTCGACGATGATGCGGACGTGGCAAACACTACTGCTGCTAGTGTTAGC
GACGCGGAGGAAGGTGTCGCCGTGCCGCCAGCTGCGAGCGGCTCAGAGAC
GAAAATGCCGGCGGCGGCGGCGCCAGCGGCAGAGAACACGGGAGTAGCAG
AGGCGGCACCGGCGGCGTTGGAAAACGAACCAAACAGAACAACGGAGTCT
CTGGAGGCAGCAGCAGCGGCGAAAATGGCAGCGGGGAGCTTTGGCGATAC
GTACGGCTTCAGCATTGGGGCTGTCTCAGCGTACGATCCCTTGTGCGAGG
CCGAGGGCTCCGAGCTGCCGGCAGATGACCTTGCTGTGAAAGAACCGAGC
GCGTCGCCCTCTCAAACGACCGATGCTGCCACCGCCGCCGCCAGCACCGC
TGGGAGTAGCTGCGAAGAGCCCGGCTGGACTAGCAGTGCGCACAACGGGG
CCGACGAGATGCACTGGATGCGGCCATTGGAAGGCGGAGCGTACAACCAA
GAGGCGCAGCAGACGCCGCCGGCGCGGTCGCTACATAGCGGCCGCGTGCC
ACCACCGCCATGGTGGCACGAGCGGCAACGGCAAACGGCGCTGTCATCGC
AGCAGGGGGAGCGGCAGCGGCAACATCAGGATGAGCAGCTGGCACACTTT
GGAGAACAGCCGCGGCCCACAACCTGGCAGCACCAGGAGGAGAGCGGCTC
TGCTGCGCCAAGCACTATGGCTGCTGGGCCCGCTCCAGCGGAAGCATCCT
CTCTGGGAGGAGGACCAGCAGCTGCGGGGGCTGGTAAGGCGCCATGGTGG
GCCGCTACTGGACCGCCTCGTCAAATCGACGGCTTCCAGGACGCCGACGA
GGGCGACGCCAGTGGCGGCTTTACTGCCGGCGTCGCCCGTATGGGGAGCA
GCACGGAGAGCGACCGGCGCCCCGCGGCATTCGCCGGCATGCCAGGGCGC
AGTGACGGTGGCAGCGATGGCGGCGGCGGTACCGGCGCGGCGGCCCCGCG
GGGCGTGCGGAGCACAAACAGGCCGGCTGGCGCTGACGTCCACGGACCGC
CGAAGCGGATGGAACCTTCTGCCGCGTCGGCTCAATATGGGGAGAAGGAG
GCAAAAGGTGACGGCGAGGCGTGGAATGACTGGGACCTTCAGGACCAACT
CGACAACTATTGGCGCCAAATCCGTTCGTCGAGCTCGCCCGATGGACTTC
GCCGCGGCGATGGCGGCAGCGGTGGCTGAGAAAGGTCGCCGGTGTGCGTG
GGTACAGGTGGCAATGTTTATTCATGTGGGCCGTAAATCTTCTGTCGGTA
GTGCAAGCATGGAAAGCACGATAGAGAACGAGCATTCTTGTCACACAAGT
AGGCAAGACAAATACAGATGAAACGGAA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig61:6602..9979- >mRNA_P-wetherbeei_contig61.6.1 ID=mRNA_P-wetherbeei_contig61.6.1|Name=mRNA_P-wetherbeei_contig61.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2919bp|location=Sequence derived from alignment at P-wetherbeei_contig61:6602..9979- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAGACTCCGAGCCTGCAAGACGGCCTGGAAGTCACAGGTCATATGG
CAGCGTGCTGACAACGGCGACTGCGCTCCTCCTCTTGCCCACATGCGACG
GTGTTGGGCAGCCGTGGAGCCACGCTGGTGGCTACTACCCTCCTCACGGC
GCGGGCAACGGAAATCCGACGCCGGAAAACGGACGAGGAGGCGATGGCAG
CTTTTGGAATCCGCAGCAGGACGACCAAGGAGCATGGCCGCCGCAGCAAT
GGCACGGAGCGCCGCAGCGGCAATACGGTGCCCCGGGCTACGGCCCGCCA
TCTTCTGGCTACCCGTCGCAGCCTGACGGCCCGGCGCTGGGCTCGCGTTT
CAGAGGCCTTCTCAACCGCGCCAAGGACAAGGTGAAGGAGCTTTCCAATG
ACCTCATTGGAACCAATATGGGCGACGGCGGACCCGCACAGTACGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGGTCGTACGGGCCGCCCGGCCCCGC
GCCTGGCTACAGGCCCGGCGACTATCCGCCCGCAGTATCACAAGGCCAGT
ACAGCGCAGCAGGAGGAGGAGAGTACGGCGCAATGCCACCGGTGTCGCCG
CCGTATGGCTACCCGCAGCAGCAAAGCCAGGGCCAATGCTACGGCGAGGA
GTTCCGGCAAGATGGTGGCCCCGATGCCCCGCAATCGCCGCCGCTGCAAC
AACAGCAGCCGCAGCCACAGCAGCAGCCCTCGTACCAGACGAATCCCCAA
TATCAATGGGGCCAGGGCGAAAGCGACATCAACGGAGCTTGGAATGGCGG
TAGTAACGGTGCCCCGGCCGCCCCCGGCGGTCGCAGCGGCGGCGACAACG
TCAATGGCGGTAGTGGCAGCAGTGGCAGCAGAAGCAGCGAAGGGTGGACG
CGAGGCTACGATGCCGGCGCGCCAGCCGCGGCTGGCGCTGGCGGCTATCG
GCAACGTTGGAGCACGGAGGAGTTTGCCGCCGACGCATGGAGCCGCGCCG
GCGCTGGGAACACGCCTGCCCAACTCAGGGCTGCTGGCGACGGCGCGGCT
GCGGGGGATGGTTCATGGTTGCCGCCCGCTCACTGGGAAATGCCTGCACC
GGGCTCCCGTCCAACGTGGGAGACCGCATCCGAATATCAGAGTGGCGGAG
CAGCAAGCGCGCAAGCTGGCGTTTCGTCGGACGGAGAGCGGCCAGCGGCG
GCGGCGGTGGCGGCGGCGCCGTCGTCGTCATCGGCGGCTGTGGATCCAAT
GGCTTCTACTCGCTGCGCGTTGGGAAACTTGCCGGCGGCATCTGCTGACG
GCCAAAACTCGACTATTGGAACTGTGGCGGAAGAAGCGGTCTCTGGAGTG
GCAGGAATCACTGCGGATTCTGCGTGGTTCACACGCCCGCCGCAGGCCTT
TGGCAGCGGCGCCAGACAACCACGCACGGGTGTCTCTGCGGCAGCGGCGG
CAGGAGACCGCTATGGCTTCACCAGCGGGAATGCAGCTGCTTCCAGCGAC
GGCTGCGCTGGGGTTGACGAGGAAGAGGAGAAGGAATCGGTAGGGGAAGC
GTCGAGCCTCGGCCAGCGCGGCATGTCCACAGCGGCACGACTGGCGGTGC
AAGGGAGCAGGGGCGCGACAGCCGCGGCCGGCGGAGACGCTTTGCCATCG
GTCGGCGTCGGATACGACACTGCCTGGAGAGAATGCGAGACGGTCGACGA
TGATGCGGACGTGGCAAACACTACTGCTGCTAGTGTTAGCGACGCGGAGG
AAGGTGTCGCCGTGCCGCCAGCTGCGAGCGGCTCAGAGACGAAAATGCCG
GCGGCGGCGGCGCCAGCGGCAGAGAACACGGGAGTAGCAGAGGCGGCACC
GGCGGCGTTGGAAAACGAACCAAACAGAACAACGGAGTCTCTGGAGGCAG
CAGCAGCGGCGAAAATGGCAGCGGGGAGCTTTGGCGATACGTACGGCTTC
AGCATTGGGGCTGTCTCAGCGTACGATCCCTTGTGCGAGGCCGAGGGCTC
CGAGCTGCCGGCAGATGACCTTGCTGTGAAAGAACCGAGCGCGTCGCCCT
CTCAAACGACCGATGCTGCCACCGCCGCCGCCAGCACCGCTGGGAGTAGC
TGCGAAGAGCCCGGCTGGACTAGCAGTGCGCACAACGGGGCCGACGAGAT
GCACTGGATGCGGCCATTGGAAGGCGGAGCGTACAACCAAGAGGCGCAGC
AGACGCCGCCGGCGCGGTCGCTACATAGCGGCCGCGTGCCACCACCGCCA
TGGTGGCACGAGCGGCAACGGCAAACGGCGCTGTCATCGCAGCAGGGGGA
GCGGCAGCGGCAACATCAGGATGAGCAGCTGGCACACTTTGGAGAACAGC
CGCGGCCCACAACCTGGCAGCACCAGGAGGAGAGCGGCTCTGCTGCGCCA
AGCACTATGGCTGCTGGGCCCGCTCCAGCGGAAGCATCCTCTCTGGGAGG
AGGACCAGCAGCTGCGGGGGCTGGTAAGGCGCCATGGTGGGCCGCTACTG
GACCGCCTCGTCAAATCGACGGCTTCCAGGACGCCGACGAGGGCGACGCC
AGTGGCGGCTTTACTGCCGGCGTCGCCCGTATGGGGAGCAGCACGGAGAG
CGACCGGCGCCCCGCGGCATTCGCCGGCATGCCAGGGCGCAGTGACGGTG
GCAGCGATGGCGGCGGCGGTACCGGCGCGGCGGCCCCGCGGGGCGTGCGG
AGCACAAACAGGCCGGCTGGCGCTGACGTCCACGGACCGCCGAAGCGGAT
GGAACCTTCTGCCGCGTCGGCTCAATATGGGGAGAAGGAGGCAAAAGGTG
ACGGCGAGGCGTGGAATGACTGGGACCTTCAGGACCAACTCGACAACTAT
TGGCGCCAAATCCGTTCGTCGAGCTCGCCCGATGGACTTCGCCGCGGCGA
TGGCGGCAGCGGTGGCTGA back to top
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