mRNA_P-wetherbeei_contig609.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig609.2.1
Unique NamemRNA_P-wetherbeei_contig609.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: D8LLB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB0_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 9.320e-67
Identity = 209/508 (41.14%), Postives = 265/508 (52.17%), Query Frame = 1
Query:  364 VHRPLPLVRNLEDYPVDD----EAAAVPDPDQVVAAITIRKRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEEDLRTAEYCLEAEDEQWLRRHPKLGESG--ALHGRLDDDTLERMLDILEKLTGTGPPAAQPQAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDED-------------GLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEPPSFMDPLATRQNFRETVLEVVEPNLPIYTPAAIG--------------------------KSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSCAGAGSAHAP-APPAVHRLQPPPLCLHVNERRVREIYAMEDENDDATVTLEPNAFG 1749
            +H+PL + R  E    +     E+ A  +  +      +RKRDIPTP+I  V  Y  EQ S +  P  YIRFP++ A  E+D+ T EY LE EDE+WL +HP+ G SG  +  G+LD D LE+ML ILE  TG   P   PQA             ++H+ W+EV  +W+ KR R G KPLLRRFWP T +NDTDPHKVFRPREK+RYKLRKHR +D +S R+L Q+++DFE+    R         R+  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   D                 GG++                   V        PSFMD L TR++    V  VVEP L +YT  A+G                            R G  PVYK+R RGR+GRGGRV++DRVPVRG      DG  +                   +     P  PP+ H L PP + L+ +ERR REI AM+D+ ++    LEP   G
Sbjct:    1 MHKPLAVSRVDEAEEANGGVLGESEARAEGGRATVVPPLRKRDIPTPIIATVPGYEAEQTSDFQVPDGYIRFPRR-AGGEDDVATCEYSLEMEDEEWLEKHPRYGLSGPPSEKGKLDVDKLEQMLGILEMGTGQADPIPLPQA-------------VHHDAWTEVYRFWKDKRSRMG-KPLLRRFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKQQLERSRDGERTSSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYGDEXXXXXXXXXXXXXXXXGGVASVGEDGGGSFGIIPGSHVTVL-------PSFMDDLKTRESI--PVRTVVEPALAVYT--ALGGRDAKGXXXXXXXXXXXXXXXXXXXXXXRVGVEPVYKFRLRGRIGRGGRVIWDRVPVRGAVPAREDGLAD----------PEEAPVVVHSSYVQFPFKPPSAHVLHPPMVNLNADERRYREICAMDDDQEEM---LEPLGLG 469          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A835YT95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT95_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.610e-58
Identity = 178/498 (35.74%), Postives = 236/498 (47.39%), Query Frame = 1
Query:  343 MRARPVDVHRPLPLVRNLEDYPVDDEAA-AVPDPDQVVAAITIRKRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEEDLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQPQAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------FDEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEP-------PSFMDPLATRQNFRETVLEVVEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSCAGAGSAHAPAPPAVHRLQPPPLCLHVNERRVREIYAMEDENDDATVTLEPNAFGG 1752
            +R R +DV+R LPLV+  +  P DD A  AV  P       ++RK DIP P    V TY  E    + PP +YIR+PK+P S EED  + EY L  EDEQWL  HPK G +G    +L  D LE++LDILE+ T  G   +Q  AE  F   LGM +  Y  VW++V +YW+Q+RQ+ G KPLL+RFWP TS NDTDPHKVFRPREK+RYKLR+ R+++ ES  ++ QL++DF++      +  + + +++                                                  FDE          XXXXXXX            A  V           PSFMD    R   + ++   VEP LP +T   I +      PV K+RCRGR+GRGGRVVFDRVPV  P +  S     Y                       A  P            L VNE +++E+Y   D+ D+    L+P    G
Sbjct:    7 IRPRQLDVYRRLPLVQVADPAPEDDVAVGAVQQP-------SVRK-DIPAPRSSFVETYATELTPDFKPPNAYIRYPKRPIS-EEDSGSQEYSLLLEDEQWLASHPKYGRNG----QLSPDVLEQLLDILERGTAYGQLLSQSNAEALFTSQLGMEKHQYQAVWNDVYSYWKQRRQKLG-KPLLQRFWPTTSANDTDPHKVFRPREKERYKLRRSRVNELESFNKMQQLKQDFDKLLSILELTRTRERIKQAALAVQQEVFDQAVYDLTNTSGEPRQLNIKPGEFKLKMRPPRPVVQALENFDEAAERLKXXXXXXXXXXXSRGEPSTGQRPAAAAVGEGVGEDTALLPSFMDNFMNRT--KASMSGRVEPALPAFTVRGICE------PVTKFRCRGRIGRGGRVVFDRVPVYEPENEYSIEPEAYVVTSSVPHKYEVPWDVLDLEHISANCPR-----------LAVNEAKLQEVYMGADDQDE--TLLDPQLLAG 469          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A8K1C4D3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4D3_PYTOL)

HSP 1 Score: 191 bits (486), Expect = 4.130e-49
Identity = 171/534 (32.02%), Postives = 243/534 (45.51%), Query Frame = 1
Query:  325 MRRQTEMRARPVDVHRPLPLVRNLEDYPVDDEA-------------AAVPDPDQVVAAITIRKRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEEDLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPP--AAQPQAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFE-----------RCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----------DEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLV---------------ATEPPSFMDPLATRQNFR---ETVLEVVEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDG--------AGNYYGDXXXXXXXXXXXSCAGAGSAHAPAPPAVHRLQPPPLCLHVNE---RRVREIYAMEDENDDATVTL 1731
            MRRQ+ +R R +DVH  + ++R+ ED  +D++A             A + DP Q V     RK++IP PV   V +Y +E    ++ P SY+RF   P++SE++    E  +E  + +WL+ HPK G++G    ++   TL +MLD LEK +    P   +  +AE  F   LGM +   + V  +V  YW QKRQ    +PLLR+FWP T  NDT+PH VFRPREK+RYKLRKHR +D E +R+L QLR DFE           R   +R      D +RR+                          XXX           D+DG+  G  +                    A  V                T+ P+FMD   T +NFR   ET  ++  P  P Y   +        +   KYRCRGR+GRGGR+V DR+PVRG   Y +          A +               S + A ++   AP  VH     PL   ++     R++EIY+M D  D+   +L
Sbjct:    1 MRRQS-LRPRQIDVHARMRIIRSQEDLVMDEDASGTQPSTTFEELVAHLDDPQQPVTQKLRRKKNIPIPVTLNVESYVDEVKDDFSVPTSYVRFQNVPSASEDNK--VELDIELAEMKWLKYHPKYGDNGDPRYQITLVTLAKMLDCLEKASAMIVPNVISLAEAEEVFAKQLGMVKTPLNRVTVDVYNYWAQKRQAL-KRPLLRKFWPQTPLNDTNPHLVFRPREKERYKLRKHRKNDMEGYRKLQQLRGDFEQVRHLLDLVKRRERAKRLQIDFLDEIRRQAVHELTSLSGALRKPEIPVDDENDAKXXXXXXXXXXXXGEDDDGVSVGATTDTEHTNAIGSSDAQKDASASASGVNGALGASASGRTVTQTTKVPTFMD-YDTSENFRLQDETDEDLRMPYYPSYPMPSSHLMATVFSQPPKYRCRGRVGRGGRLVIDRIPVRGSRYYSTSERMATPPAFAKSASAPTMSLAAGGATPSTSEALNSGHHAPIFVHETSFRPLARKIDSLTTTRLQEIYSMSDSEDELFESL 529          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A3R7HX72_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HX72_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.360e-45
Identity = 171/553 (30.92%), Postives = 231/553 (41.77%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAAVPDP----DQVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEE------DLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCA-----------GRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXF---------DEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEP---PSFMDPLATRQNF--------------RETVLEVVEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSCAGAG----------SAHAPAPPA------------VHRLQPPPLC---LHVNERRVREIYAMEDENDDATVTLEP 1737
            R++ +R R +DVH  + ++R+ ED   DD+      P     Q+VAA+  R          K+DIP PVI  VA+Y++     +  P SY+RF   P  SE       + +  E  L+  D +WL+RHPK G+ G    +L  +   +MLD LEK +    P      +AE+ F   L M +   + V  +V AYW  KRQ    +PLLRR+WP T  NDT+PH VFRPREK+RYKLRKHR +D E   +L QLR DFER              +R      D +RR+                         XXXX          DE+G    G                    +    V   P   P+FM+   T  NF                 +   V P+ P+ TP  +    + P    K+RCRGR+GRGGR+V DR+PV          +  +YG              A +G          SA  P   A            V  L   PL     HV  +R+ EIY M D  D+    LEP
Sbjct:    2 RRSSLRPRQIDVHARMRIIRSEEDLDADDDGGGSSQPHATFQQLVAALEARQQPAAQAKRRKKDIPIPVILSVASYDQSVSPDFEVPTSYVRFQTLPRDSENGSELIPESQEVEVDLDLSDMRWLKRHPKYGQDGDPRYQLSQERFAQMLDALEKASALLNPNVMTLAEAEDVFAKRLSMQKTPLNRVTCDVYAYWAAKRQAL-KRPLLRRYWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFHKLQQLRVDFERVRRLMDLVRRRERAKRLQLDFLDEIRRQAEHELTNRGPNAVIRKPVVPVDEERXXXXXXXXXXXXHRDENGNLVAGDGSAFGAMGGGDSKADSKSGKAQAAVVEGPQIAPTFME-YDTSANFVMEDASAMTDTDGSPRDLTSPVYPSYPLSTPELMAAIFQQPP---KFRCRGRIGRGGRLVMDRIPVP---------SSRFYGPTETNAPSLKPTVTATSGMAATLTTPDSSASVPVANAEINAASSQGAILVQELAVRPLMDKIEHVTSKRLDEIYGMSDSEDEL---LEP 537          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: D0NYV5_PHYIT (Enhancer of polycomb-like protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NYV5_PHYIT)

HSP 1 Score: 180 bits (456), Expect = 2.500e-45
Identity = 166/512 (32.42%), Postives = 228/512 (44.53%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEA---AAVPDP--DQVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEEDLRTAEYC----------LEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEPPSFMDPLATRQNF-RETVLEV--------VEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSC-AGAGSAHAPAPPAVHRLQPPPLCLHVNE---RRVREIYAMEDENDDATVTLEPNAF 1746
            R++ +R R +D+H  + ++R  +D   DD+    A+ P     Q+VA +  R          K+DIP PVI  V +Y+    + +  P SY+RF   P   +ED  T+E            L+ ED +WLRRHPK G  G    +L  +   +MLD LEK +    P      +AE+ F   L M +   + V  +V AYW  KRQ Q  +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER      +    +  +R +                               D         XXXXXX           ++A       P+FM+   T  NF  E   +         V P+ P+  P  +    + P    KYRCRGR+GRGGR+V DR+PV          +  YYG            S  A  G A       V  L   PL   +N+   +R+ EIY M D  D++   L  + +
Sbjct:    2 RRSSLRPRQIDIHARMRVIREEDDLDADDDGTGGASQPHATFQQLVANLAARQKAGSQSKRNKKDIPIPVILPVPSYDISVSADFEVPTSYVRFQSLPR--DEDAATSEALGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQLSQERFAQMLDALEKASALLNPNVMTLAEAEDVFAKRLEMRKTPLNRVTCDVYAYWAAKRQ-QLRRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERVRRLLDLVRRRERAKRLQLDFLDEIRRQAEHELTHRGPNAGVRKPVIPVDEERXXXXXXXXXXXXHREVENGIEGPQIA-------PTFME-YDTSANFVMEDTTDTDSSPRSGPVYPSYPLSPPQLMAAIFQQPP---KYRCRGRIGRGGRLVMDRIPVP---------SSRYYGITETNAPTLKSTSLVAKVGIAANHGAVLVQELSVHPLMHKMNQMTSKRLDEIYGMSDSEDESLEPLSSSVY 490          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: H3GTE9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTE9_PHYRM)

HSP 1 Score: 180 bits (457), Expect = 4.440e-45
Identity = 148/444 (33.33%), Postives = 200/444 (45.05%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAAVPDP-----DQVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKP----ASSEEDL----RTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPP--AAQPQAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDEDGL-----------------PAGGISGXXXXXXXXXXXXXXXXXEVARLVATEP--PSFMDPLATRQNF---RETVLE--------VVEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPV 1497
            R++ +R R +DVH  + ++R+ ED   DD+ A           Q+VA +  R          K+DIP PVI  V TY+   P+ +  P SY+RF   P    +S  E L    +  E  L+ ED +WLRRHPK G  G    ++  D   +MLD LEK +    P    Q +AE+ F   LG+ +   + V  +V AYW  KRQ+   +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER      +    +  +R +                               DG                    G ++G                   A  V      P+FM+   T  NF    ET  +         V P+ P+  P  +    + P    KYRCRGR+GRGGR+V DR+PV
Sbjct:    2 RRSSLRPRQIDVHARMRIIRSEEDLDADDDGAGGASQTHATFQQLVANLEARQQAGNQAKRRKKDIPIPVILAVPTYDISVPADFEAPTSYVRFQALPRDEDSSGSEALGPEPQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQVSQDCFAQMLDALEKASALLNPNVMTQAEAEDVFSKRLGLHKTPLNRVTCDVYAYWAAKRQKL-RRPLLRRFWPQTPLNDTNPHSVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERVRRLLDLVRRREQAKRLQLDFLDEIRCQAEYELTHRGPNAVVRKPVIPVDGECERHKKXXXXXXXXRDGENGNVAGDGTGFGDSGDSKAGADAGKASAVEGPQIAPTFME-YDTSANFVMEDETDTDGSPRELSGPVYPSYPLSPPRLMAAIFQQPP---KYRCRGRIGRGGRLVMDRIPV 440          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A225X147_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X147_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.210e-45
Identity = 167/535 (31.21%), Postives = 228/535 (42.62%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAAVPDP-----DQVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEE--------DLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXF--DEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEPPSFMDPLATRQNF-RETVLEV----------VEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSCAGAGSAHAPAPP----------------------AVHRLQPPPLCLHVNE---RRVREIYAMEDENDDATVTLEPNAF 1746
            R++ +R R +DVH  + ++R  ED   DD+ A           Q+VA +  R          K+DIP PVI  V TY+   P  +  P SY+RF   P   E         + +  E  L+ ED +WLRRHPK G  G    +L  +   +MLD LEK +    P      +AE+ F   L M +   + V  +V AYW  KRQ+   +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER      +    +  +R +                               DE+         XXXXXX           ++A       P+FM+   T  NF  E   ++          V P+ P+  P  +    + P    KYRCRGR+GRGGR++ DR+PV          +  YYG            S    G+  A A P                       V  L   PL   +N+   +R+ EIY M D  D+    L  + +
Sbjct:    2 RRSSLRPRQIDVHARMRIIREEEDLDADDDGAGGSSQPRATFQQLVANLEARQQTGNQSKRRKKDIPIPVILPVPTYDTSVPPDFEVPTSYVRFQTLPRDEESTGLESLGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQLSQERFGQMLDALEKASALLNPNVMTLAEAEDVFAKRLAMHKTPLNRVTCDVYAYWAAKRQKL-RRPLLRRFWPQTPLNDTNPHSVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERVKRLLDLVRRRERTKRLQLDCLDEIRRQAEHELTNRGPNAAVRKPVIPVDEERXXXXXXXXXXXXXXDNENGTAVEGPQIA-------PTFME-YDTSANFVMEDTTDMDGSPRELSGPVYPSYPLSPPKLMAAIFQQPP---KYRCRGRIGRGGRLIMDRIPVP---------SSRYYGITEICAPTLKSTSST-TGTLSASATPDNGGALPFANSELGVAANHGAVLVQELAVHPLAHKINQVTSKRLDEIYDMSDSEDEFIEPLSSSVY 514          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A0N7L5B9_PLAHL (Enhancer of polycomb-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5B9_PLAHL)

HSP 1 Score: 174 bits (441), Expect = 2.870e-43
Identity = 143/426 (33.57%), Postives = 194/426 (45.54%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAA-VPDPD----QVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEE--------DLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEPPSFMDPLATRQNF-RETVLEV----------VEPNLPIYTPAAIGKS-RRGPAPVYKYRCRGRMGRGGRVVFDRVPV 1497
            R++ +R R +D+H  + ++R  ED   DD+ AA    P     Q+VA +  R          K+DIP PVI  V+TY+    + +  P SY+RF   P             +L+  E  L+ ED +WLRRHPK G  G    +L  +   +MLD LEK +    P      +AE+ F   L M +   + V  +V AYW  KRQ+   +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER    R +        R K                             D+ G+  G                     ++A       PSFM+   T  NF  E   +           V P+ P+  P  I    ++ P    +YRCR R+GRGGR+V DR+P 
Sbjct:    2 RRSSLRPRQIDIHARMRIIREEEDLEADDDGAAGATQPQTSFQQLVANLEARQRAVVQSKRKKKDIPIPVILPVSTYDNSVSADFDIPTSYVRFQPLPRDEHAVDLDTFGPELQNVEVDLDVEDMRWLRRHPKYGLDGDPRYQLSQERFAQMLDALEKASALLNPNVMTLAEAEDVFAKRLNMYKTPLNRVTCDVYAYWAAKRQKL-RRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGLRKLQQLRVDFERV---RRLLELVRRRERAKRLQLDFLDEIRRQAEHELVNRAGHANSKLDKAGVVEG--------------------PQIA-------PSFME-YDTSANFVMEDTTDTDSSPRDLRGPVFPSYPLSPPRFIATIFQQSP----RYRCRARIGRGGRLVLDRIPA 391          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: G4YJM1_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YJM1_PHYSP)

HSP 1 Score: 174 bits (442), Expect = 3.140e-43
Identity = 162/532 (30.45%), Postives = 224/532 (42.11%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAA-VPDPDQVVAAITI--------------RKRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEE---------DLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDEDGLPAGGISGXXXXXXXXXXXXXXXXXEVARLVATEPPSFMDPLATRQNF--------RETVLEVVEPNLPIYTPAAIGKSRRGPAPVY---KYRCRGRMGRGGRVVFDRVPVRGPGDYCSDGAGNYYGDXXXXXXXXXXXSCAGA--------GSAHAPAPPA------------VHRLQPPPLCL---HVNERRVREIYAMEDENDDATVTLEPNAF 1746
            R++ +R R +DVH  + ++R  +D   DD+       P  V   + +              +K+DIP PVI  V TY    P+ +  P SY+RF   P S E+         + +  E  L  ED +WLRRHPK G  G    +L  +   +MLD LEK +    P      +AE+ F   L M +   + V  +V AYW  KRQ+   +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER      +    +  +R +                               D         XXXXXX           ++A       P+FM+   T  NF         +T     + + P+Y    +  S+   A      KYRCRGR+GRGGR+V DR+PV          +  YYG              + A        G+A  P+               V  L   PL     H+  +R+ EIY M D  D+    L  + +
Sbjct:    2 RRSSLRPRQIDVHARMRIIRTEDDLEADDDGTGGATHPHAVFQQLVVNLEARQQAGSQSKRKKKDIPIPVILSVPTYETAVPADFEVPTSYVRFQALPRSDEDPAGLESLGPEPQDIELDLGLEDMRWLRRHPKYGVDGDPRYQLSQERFAQMLDALEKASALLNPNVMTLSEAEDVFAKRLNMHKTPLNRVTCDVYAYWAAKRQKL-RRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERVRRLMDLVRRRERAKRLQLDFLDEIRRQAEHELTNRGPNAVVRKPVIPVDEERXXXXXXXXXXXXHRDSENGIEGPQIA-------PTFME-YDTSTNFVMEDASAMTDTDGSPRDLSGPVYPSYPLSPSKLMAAIFQQPPKYRCRGRIGRGGRLVMDRIPVP---------SSRYYGPIETSAPSLKPTQMSSALASAIQQNGAAGVPSANLEVGVAANQGAVLVQELSVKPLMHKINHLTSKRLDEIYGMSDSEDEYLEPLSSSVY 515          
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Match: A0A2P4X1Y3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1Y3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.790e-42
Identity = 148/444 (33.33%), Postives = 197/444 (44.37%), Query Frame = 1
Query:  331 RQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAAVPDP-----DQVVAAITIR----------KRDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKP-----ASSEE---DLRTAEYCLEAEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQP--QAENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTNDTDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAG-----------RRGMASSADPLRRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDEDGLPA------GGISGXXXXXXXXXXXXXXXXXEVARLVATEP--PSFMDPLATRQNF-RETVLEV----------VEPNLPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPV 1497
            R++ +R R +DVH  + ++R  ED   DD+ A           Q+VA +  R          K+DIP PVI  V TY+    + +  P SY+RF   P     A SE    + +  E  L+ ED +WLRRHPK G  G    +L  +   +MLD LEK +    P      +AE+ F   LGM +   + V  +V AYW  KR +   +PLLRRFWP T  NDT+PH VFRPREK+RYKLRKHR +D E  R+L QLR DFER              +R      D +RR+                           XX              G +SG                 +    V      P+FM+   T  NF  E   +           V P+ P+  P  +    + P    KYRCRGR+GRGGR+V DR+PV
Sbjct:    2 RRSSLRPRQIDVHARMRIIREEEDLDADDDGAGGSSQPHTTFQQLVANLEARQQAGSQSKRRKKDIPIPVILSVPTYDTSVSADFDVPTSYVRFQALPRDEDSAGSESLGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQLSLERFGQMLDALEKASALLNPNVMTLAEAEDVFAKRLGMHKTPLNRVTCDVYAYWAAKRLKL-RRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERVKRLLDLVRRRERTKRLQLDFLDEIRRQAEHELTNRGPNAIVRKPIIPVDEERDRXXXXXXXXXXHRDSENGSLSGDSALGAGSDSRTDGKHGKAGAAVEGPQIAPTFME-YDTSANFVMEDTTDTDGSPRALSGPVYPSYPLSPPKLMAAIFQQPP---KYRCRGRIGRGGRLVMDRIPV 440          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig609.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB0_ECTSI9.320e-6741.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT95_9STRA4.610e-5835.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C4D3_PYTOL4.130e-4932.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7HX72_9STRA1.360e-4530.92Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
D0NYV5_PHYIT2.500e-4532.42Enhancer of polycomb-like protein n=13 Tax=Phytoph... [more]
H3GTE9_PHYRM4.440e-4533.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A225X147_9STRA5.210e-4531.21Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A0N7L5B9_PLAHL2.870e-4333.57Enhancer of polycomb-like protein n=1 Tax=Plasmopa... [more]
G4YJM1_PHYSP3.140e-4330.45Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A2P4X1Y3_9STRA3.790e-4233.33Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig609contigP-wetherbeei_contig609:3658..8171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLB0
Preferred nameEPC1
PFAMsEPL1,E_Pc_C
Model size2209
Max annot lvl2759|Eukaryota
KEGG koko:K11322
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000123,GO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0000902,GO:0000904,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005700,GO:0005720,GO:0005725,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010467,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010948,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016239,GO:0016241,GO:0016358,GO:0016569,GO:0016570,GO:0016573,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031090,GO:0031175,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032777,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035267,GO:0036211,GO:0040011,GO:0040029,GO:0042221,GO:0042330,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043968,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045595,GO:0045597,GO:0045786,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070013,GO:0070316,GO:0070317,GO:0070983,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097485,GO:0097659,GO:0120036,GO:0120039,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons8
Evalue1.4e-69
EggNOG OGsKOG2261@1|root,KOG2261@2759|Eukaryota
Descriptioninternal peptidyl-lysine acetylation
Cds size1488
COG categoryK
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig609.2.1prot_P-wetherbeei_contig609.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig609 4055..7511 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186888.037549-UTR-P-wetherbeei_contig609:3657..40541683186888.037549-UTR-P-wetherbeei_contig609:3657..4054Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig609 3658..4054 -
1683186888.1137154-UTR-P-wetherbeei_contig609:7511..77361683186888.1137154-UTR-P-wetherbeei_contig609:7511..7736Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig609 7512..7736 -
1683186888.1240573-UTR-P-wetherbeei_contig609:8072..81711683186888.1240573-UTR-P-wetherbeei_contig609:8072..8171Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig609 8073..8171 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186888.0470104-CDS-P-wetherbeei_contig609:4054..43211683186888.0470104-CDS-P-wetherbeei_contig609:4054..4321Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 4055..4321 -
1683186888.0563126-CDS-P-wetherbeei_contig609:4417..48921683186888.0563126-CDS-P-wetherbeei_contig609:4417..4892Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 4418..4892 -
1683186888.066652-CDS-P-wetherbeei_contig609:5501..57461683186888.066652-CDS-P-wetherbeei_contig609:5501..5746Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 5502..5746 -
1683186888.0758007-CDS-P-wetherbeei_contig609:6056..61961683186888.0758007-CDS-P-wetherbeei_contig609:6056..6196Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 6057..6196 -
1683186888.085027-CDS-P-wetherbeei_contig609:6476..65981683186888.085027-CDS-P-wetherbeei_contig609:6476..6598Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 6477..6598 -
1683186888.0948644-CDS-P-wetherbeei_contig609:6909..70251683186888.0948644-CDS-P-wetherbeei_contig609:6909..7025Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 6910..7025 -
1683186888.1042197-CDS-P-wetherbeei_contig609:7388..75111683186888.1042197-CDS-P-wetherbeei_contig609:7388..7511Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig609 7389..7511 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig609.2.1

>prot_P-wetherbeei_contig609.2.1 ID=prot_P-wetherbeei_contig609.2.1|Name=mRNA_P-wetherbeei_contig609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=496bp
MRRQTEMRARPVDVHRPLPLVRNLEDYPVDDEAAAVPDPDQVVAAITIRK
RDIPTPVIREVATYNEEQPSGYAPPVSYIRFPKKPASSEEDLRTAEYCLE
AEDEQWLRRHPKLGESGALHGRLDDDTLERMLDILEKLTGTGPPAAQPQA
ENAFMGFLGMSRALYHEVWSEVVAYWRQKRQRQGSKPLLRRFWPATSTND
TDPHKVFRPREKDRYKLRKHRMSDRESHRRLVQLRRDFERCAGRRGMASS
ADPLRRKKKRREREERERHSGGSGSAAATVAVEDEDFDEDGLPAGGISGG
SASSAATAAAAAAAAEEVARLVATEPPSFMDPLATRQNFRETVLEVVEPN
LPIYTPAAIGKSRRGPAPVYKYRCRGRMGRGGRVVFDRVPVRGPGDYCSD
GAGNYYGDDEPPPPAAVVVSCAGAGSAHAPAPPAVHRLQPPPLCLHVNER
RVREIYAMEDENDDATVTLEPNAFGGGPGPLRPPGAPVVNYSILV*
back to top

mRNA from alignment at P-wetherbeei_contig609:3658..8171-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig609.2.1 ID=mRNA_P-wetherbeei_contig609.2.1|Name=mRNA_P-wetherbeei_contig609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4514bp|location=Sequence derived from alignment at P-wetherbeei_contig609:3658..8171- (Phaeothamnion wetherbeei SAG_119_79)
CGGGAAACGGAGAGCGCATAGCATTACAGCGGAGGCCTATTTCTACCACC TTGTTGCCAATTTTACACCACCACGGTGGCGGAATCGCAGCCTCAACAGG CAAGAATTTTTGAAATATTTTTTTCGACATTTTGTCGGTGATGGCTGGGA GGTGTAGTGGTCCAACCGTTATACTAATGACGAATTCATATGCCCACATG CCTTGACGAATATTCGGCGTGCCAATCCCGGCTTTGACTTGCAACCCTGT TGGTATTTGGAAGTGGCGGTTGTTTTGAATTGCCGTGGCAGGATCACACT TCCTCCCCCGTGACCGCTTGGACGCTTAACAGAGCCAATCGTCTCCCCAA CACTAAAGCAACGAGTTTAAACCTTAAAATTGCAACTTCTGATTCTCTGA AGCCGACTTTTTCTCTGCACCACACCCATGCGCAGGCACAAAATCAAAGT CGAACACCGCCGGCTGAGCCCAACTGAAAACGGAGAGCCAAGCGTCAAAG TGCAGAAGATTTCGAGGCTGGCAAGTTCGTGGTAACTTCCCCTGCTGCCT CTTTAGGCATCCCGTGGATCTGCAGCCAGCTGCTGCTTCCGCCAGCATCG CCGCCGCCCCACGGTCAGCTCCTCCCGGCGCCTGCCGGGTGAGGGAAAAG AAAGAAGCAAATGCGGCGGCAAACGGAGATGCGGGCACGTCCCGTCGACG TCCACCGGCCCCTGCCGCTCGTGCGGAACCTCGAGGATTACCCCGTGGAC GATGAGGCGGCCGCCGTCCCCGATCCGGATCAGGTGCGCTCGTTTCGTGG TCGCTCTCGCTTTCACAGTTGCGACCCTCCCCTTGGCTGCCGCGGCCAGG GCTCGTCACTGCCGCTGCTGTGCCACAACCATTGCCTCTGCTGTGTTGTC GTCGCGGCTTGCGACGATACCGCTGGCTCATCCCAATCGCCGCTTTGGCG ACTTTTGCCGCCATCGGCAATAATGGCTGCTGTTATTCTTCCAGAGCGCC CTTTCAAAGTGTTGCTTGAGAGGTGTATGTGGGACTCATCCCTTTGTCTG CCATGTCGGAACGGCTTGCTGTCCCGCTGCCTGCTGCTCCGACGCGCGAT CTCGTCCACCCCGCTGCTCTCTTGCCGCATCCGGTCCCGCCTGCAGGTGG TGGCCGCCATTACGATCCGGAAGCGCGACATCCCGACGCCCGTCATTCGC GAGGTGGCCACGTACAACGAGGAGCAGCCGAGCGGCTATGCGCCGCCGGT CTCGTACATTCGGTGAGCAGTCATCGCTGGCCCGCCCGCCCGCCGCCGCC ACCGCCGCGATGGTTTGCCGTGGCCGCCCTTTTTGCTGCCGCCTGTCGCA GCCGGCGCCGGCGCCGCGGCGGCCGGCGTTCCAACCCTGACGGCGCGCGC TTGACCCTAATGAAGCCCATTTCAGTCCATGCACGCTTGTCGCGCCTCGG AATATCCTTTTATAGTTGTTGATCCGTGTGGAGAGCTTCGACCTCTGCTT GGGGGCCTCTTCTCCTCTCTACCAACCTCCCTTGTTTCCTTTTTTCTTCT TATTCTCCCATATCTGCCGACAGGTTTCCGAAGAAGCCGGCGTCTTCGGA GGAGGACCTGCGGACAGCGGAGTATTGCCTCGAGGCCGAAGACGAGCAGT GGCTGCGACGGCACCCTAAGCTCGGAGAAAGCGGCGCTCTTCACGGTGAG TGGGTCAGCCGATTCAGTTTGCAGACTGCGATCTGCGCAGGCGGAGTTTC TTTCCCTTTCTCTTTTGCGTCCCGTCCCTTTTTGGAATCTTCCTTCGTTT TTTAAAGCTCGGAGGAGAATGTGCTTGTCCTGCCCTCCATAGCGAGTAGA GTGTGCAGTCATGCAGTCCGTTTTACTTCCTTCTTTCTGTAACCACATTT CCCGTCCGTTATGCTTACTCTCAGCTGCGTATTTCTTCCGAACTCCCCCA AACACCCGAAAATGGACTGTATCAGGTCGCCTGGACGACGACACGCTGGA GCGGATGCTGGATATCCTCGAGAAGCTGACGGGAACGGGGCCGCCCGCCG CACAGCCGCAGGCTGAGAACGCCTTTATGGGCTTCCTCGGCATGTCCCGG GCCCTCTATCACGAGGTAGACCATGCGGCTTTCGGCTTTGGCGGATCAAG GCAGCGTAGGGTTTCGGGTTTATCACAGGAGAAGCTGGAGCTTGCGGTGT CATCCGTTATGTTTCTCGCCTTCTTGGAGCTTGTTCGTCGTGAAGGATCA GATATCGGATCCGGCTTCTTGACTTTCTTGACTGGTCGATCAACTTTCCT CTTTTCTTAGGAATTCTTGCAAATCTCCGGATCTTCTATTGTGAAACCGC AATCTCGTACCGTATCTCATTGCTCTGCCCTACTCTCCTCCGCGGCTCGG CGCGATACGATGCCGTAAATTGCAGGTGTGGTCGGAAGTGGTGGCCTATT GGCGGCAGAAGCGGCAGCGGCAGGGCAGCAAGCCGCTGCTGCGCCGCTTC TGGCCCGCCACGTCGACCAACGACACGGACCCGCACAAGGTGTTCCGGCC GCGCGAGAAGGACCGTTACAAGCTGCGCAAGCACCGCATGAGCGACCGCG AGAGCCACCGCCGCCTCGTGCAGCTCCGCCGGGACTTTGAAAGGTGCGCC GGACGGCGTGGTATGGCGAGGTGCTGCGCAGCGGATTAGGCGGGTCTGCA TACGTTATTAATATTGTTAATGATGTTCGTTGCCTTCTGCGTGCGTTTGT AGGGCTAAATTCCTTTGGCGTTTTTTAGCGATGGTAGTGACGTTAGATAT ACGTGACGATGCGGTTCCGCCGGGCCCCAGCAGGGGTCCGTGGCGGATCG CTGGTGGGGTCTGGACCCTGCAGCGACTAGTCCCACAAAACCTTTTTGCT GATTCCATCCTCTTCTGCCCTTCCAAACCCATTTCCCCATCTTCACCCAA CCGGCGACTAACCCCCCCACCTTCACACCGTCGGCAATGGCAACAACACA AAGCAGCGTGCTCTCACTGCTGGACCTCGTGCGGCGGCGCGAGCACATCA AGCAGCAGGCCCTCCGCCTTCAGCAGGAGTCGTTCGAGCAGACCGTCTAC GACATGACAGACGTCTCCGGCAAGCCCCGTAAGGGTGGCGTCCACGCCTC GCACTTCTCCCGCAGCGGCGGCGGGGGCGGCGGCCTCAAGTCGCGTGCCC CGCGCACCGCTGGCGCCGGCGCCGGTGCCGCCGGGAGCATCGGGATCGGC GATCTTGGAGACAGCGGTGGCGCCGTCAGCAGCGCGGACCCGCTGCGGCG GAAGAAGAAGCGGCGGGAGCGCGAGGAGCGGGAGCGCCATAGCGGCGGGA GCGGCAGTGCAGCCGCCACCGTGGCAGTGGAGGACGAAGACTTTGACGAA GACGGCTTGCCAGCCGGCGGCATCAGCGGCGGCAGTGCCAGCAGCGCTGC GACCGCTGCGGCGGCGGCCGCCGCGGCAGAGGAGGTGGCGCGGCTGGTGG CAACAGAGCCGCCATCCTTCATGGATCCGCTTGCAACCCGCCAGAACTTC CGCGAAACCGTTTTGGAAGTCGTCGAGCCGAACCTTCCCATCTACACGCC CGCGGCAATCGGCAAGAGCCGTCGCGGCCCCGCGCCGGTCTACAAGTACC GGTGTCGCGGCCGCATGGGGCGGGGCGGCCGTGTCGTCTTCGACCGCGTG CCGGTGCGCGGTCCCGGCGACTACTGCAGCGACGGCGCCGGCAACTACTA CGGCGTCGATGGAGAACACAGCGTCGGCGGCGCCGCTGGCGGCGCCGTCG TCGTCACCATCGGCGTTGGCGGCGCCGGCGGCGCCGGCAGCGTGGGAGAG GACGATGAGCCGCCGCCGCCGGCCGCCGTGGTGGTGTCGTGCGCGGGGGC GGGATCGGCCCACGCGCCGGCGCCGCCCGCCGTGCATCGGCTGCAGCCGC CGCCGCTGTGCCTCCATGTCAACGAACGGCGGGTCCGTGAAATCTACGCC ATGGAGGACGAGAACGATGACGCGACCGTCACGCTCGAACCGAACGCCTT CGGTGGCGGCCCGGGCCCACTGCGGCCGCCGGGCGCACCTGTCGTCAACT ACTCCATTCTGGTCTGAGAGCGGCACGGGGTAAGCGGCCAGCATAATGCG GGCGTCTTCCGGCGGCAGTGGCGGCGGGAACCGCGGCGTTACCGCAGTCG AGTCGGATGCAAGAGTATGATCTGCTTGGTATCTTTGAGTGACTTGAACG GATCTGAATACAATACAGCGACGGCATTTTCGGCTCTGAGGAAAAAGGGC CATGCTAAGACTTGGCGGTGGTGGTGGCTGCGGCAGCAGCGGCAACGGCG GCGGTGACTGCCAGGTCGATCTGCCGTCGGCGACGGAACAAAACTGCGCT TGTGCGGAAAGGAAGGCCGCGAGAGCGGAGCGGGTAGTCTTAACAAGAAA AGAGACAGCCCATCACAACAATATTAATAGAGATACGAAAGTTGAATAAA GAATGGAAACATTA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig609:3658..8171-

>mRNA_P-wetherbeei_contig609.2.1 ID=mRNA_P-wetherbeei_contig609.2.1|Name=mRNA_P-wetherbeei_contig609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1488bp|location=Sequence derived from alignment at P-wetherbeei_contig609:3658..8171- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCGGCAAACGGAGATGCGGGCACGTCCCGTCGACGTCCACCGGCC
CCTGCCGCTCGTGCGGAACCTCGAGGATTACCCCGTGGACGATGAGGCGG
CCGCCGTCCCCGATCCGGATCAGGTGGTGGCCGCCATTACGATCCGGAAG
CGCGACATCCCGACGCCCGTCATTCGCGAGGTGGCCACGTACAACGAGGA
GCAGCCGAGCGGCTATGCGCCGCCGGTCTCGTACATTCGGTTTCCGAAGA
AGCCGGCGTCTTCGGAGGAGGACCTGCGGACAGCGGAGTATTGCCTCGAG
GCCGAAGACGAGCAGTGGCTGCGACGGCACCCTAAGCTCGGAGAAAGCGG
CGCTCTTCACGGTCGCCTGGACGACGACACGCTGGAGCGGATGCTGGATA
TCCTCGAGAAGCTGACGGGAACGGGGCCGCCCGCCGCACAGCCGCAGGCT
GAGAACGCCTTTATGGGCTTCCTCGGCATGTCCCGGGCCCTCTATCACGA
GGTGTGGTCGGAAGTGGTGGCCTATTGGCGGCAGAAGCGGCAGCGGCAGG
GCAGCAAGCCGCTGCTGCGCCGCTTCTGGCCCGCCACGTCGACCAACGAC
ACGGACCCGCACAAGGTGTTCCGGCCGCGCGAGAAGGACCGTTACAAGCT
GCGCAAGCACCGCATGAGCGACCGCGAGAGCCACCGCCGCCTCGTGCAGC
TCCGCCGGGACTTTGAAAGGTGCGCCGGACGGCGTGGTATGGCGAGCAGC
GCGGACCCGCTGCGGCGGAAGAAGAAGCGGCGGGAGCGCGAGGAGCGGGA
GCGCCATAGCGGCGGGAGCGGCAGTGCAGCCGCCACCGTGGCAGTGGAGG
ACGAAGACTTTGACGAAGACGGCTTGCCAGCCGGCGGCATCAGCGGCGGC
AGTGCCAGCAGCGCTGCGACCGCTGCGGCGGCGGCCGCCGCGGCAGAGGA
GGTGGCGCGGCTGGTGGCAACAGAGCCGCCATCCTTCATGGATCCGCTTG
CAACCCGCCAGAACTTCCGCGAAACCGTTTTGGAAGTCGTCGAGCCGAAC
CTTCCCATCTACACGCCCGCGGCAATCGGCAAGAGCCGTCGCGGCCCCGC
GCCGGTCTACAAGTACCGGTGTCGCGGCCGCATGGGGCGGGGCGGCCGTG
TCGTCTTCGACCGCGTGCCGGTGCGCGGTCCCGGCGACTACTGCAGCGAC
GGCGCCGGCAACTACTACGGCGACGATGAGCCGCCGCCGCCGGCCGCCGT
GGTGGTGTCGTGCGCGGGGGCGGGATCGGCCCACGCGCCGGCGCCGCCCG
CCGTGCATCGGCTGCAGCCGCCGCCGCTGTGCCTCCATGTCAACGAACGG
CGGGTCCGTGAAATCTACGCCATGGAGGACGAGAACGATGACGCGACCGT
CACGCTCGAACCGAACGCCTTCGGTGGCGGCCCGGGCCCACTGCGGCCGC
CGGGCGCACCTGTCGTCAACTACTCCATTCTGGTCTGA
back to top