mRNA_P-wetherbeei_contig6076.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6076.1.1
Unique NamemRNA_P-wetherbeei_contig6076.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: T0S1B8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S1B8_SAPDV)

HSP 1 Score: 127 bits (319), Expect = 6.940e-28
Identity = 89/269 (33.09%), Postives = 113/269 (42.01%), Query Frame = 3
Query:  318 VLSCEPLAAVVTDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAF----GGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
            VL     A++  D  +TCA+CF          LRC+ C+ L YC + CQRADW  H PEC+  A +     G   TPTV L ARL    + S  +  D                                     Q +R+M+ L                          H   L    + CN FTV   +  P+GI  YP AA A NH+C P   ATF GR L LR +RP+  G EL ++YT+L  P  VR+ ELA  Y F C C RC
Sbjct:   26 VLRTTATASLPLDLGATCAHCFAP------AALRCARCKLLKYCSRNCQRADWSSHGPECKYLAPYMASAAGPSPTPTVLLAARL----HYSAIDPSD------------------------YATNLDAHAPDAIQRYRDMSALVLQILGATNVADTLPSM---------HRLLLTFAMLNCNAFTVCSPEQVPLGIGFYPLAA-AYNHACVPNCVATFCGRDLYLRALRPISRGDELTIAYTELVAPTSVRRLELATSYFFHCDCVRC 250          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A6H5K4S3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4S3_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.790e-27
Identity = 97/350 (27.71%), Postives = 146/350 (41.71%), Query Frame = 3
Query:  270 RRP----CVLHSLAESLSK*VLSCEPLAAVVTDFSST--CAYCFCNFVAEER--RPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQR-ESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMAD------LXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNT----------------------------FTVTDDDLR-PVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPP--PEDAALDAFRCSDAACPG 1178
            RRP    C++ +    L   +++ +PL+AV+ +  +   CA CF +   +    R  RCSGC R+ YC + CQ+ADW++HRPEC+A+A+    R  T T+ L  R+L+ + RS    +G                                      +E+  MA+      L                            A+ +LG+++CN                             F++ +  L   VG  LY  AA+A NHSC P    +F G+TL LRC RP+  G E+ +  T + +P   R++ L   Y F C CERC  P    ED  L+AF C  + C G
Sbjct:   18 RRPGRGRCLIAAKNLGLGDLIMAVQPLSAVLEESQARTHCARCFESMDKQHSGGRGSRCSGCSRICYCSRKCQKADWREHRPECKAWASNSSARTPTRTLRLAGRILNAINRSDNGNTGSMGTVNGGEDDGSSHAPSVREAVDELVHHNDDRSPEQKEEYMLMANFVARLCLAGCGDSKKGSALLWPSSQGRGLPGLVDAAYAVLGKLSCNVRNLRRLRSNTHVLSPTISLLMASSSRQVFSIAESALNGEVGCGLYLEAAAA-NHSCNPNAAQSFSGKTLSLRCTRPIRKGEEITIGITQIQKPGPARRESLRKTYFFECRCERCESPEGRAEDMRLEAFACPGSECTG 366          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: UPI001CF1FE39 (LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SMYD3-like n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF1FE39)

HSP 1 Score: 116 bits (290), Expect = 8.670e-24
Identity = 74/276 (26.81%), Postives = 118/276 (42.75%), Query Frame = 3
Query:  375 YCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAACPGPVRRCRD 1199
            YC C+F   +R  + RCS C+   YC + CQ+  WK+H+ EC         R T  V L+A+++H     +R+                                        ++F+E++                             + + + G+I CN+FT+ D +L+P+G+ +Y   AS  NHSC P   A F G TL +     +  G EL +SYT+L  P + R+++L + Y F C C +C     ED  + + +C D AC G +  C D
Sbjct:   51 YC-CDFCFAKRDDIQRCSRCKFFRYCDRECQKKAWKEHKVECERIRQVSPNRPTDLVLLIAKIIH-----KRQLDKTFCADLSNLVSHRDQLRQSKKDTFSAILAVLVKFLGHKKFQEISP---------------------------PELFEIFGKITCNSFTICDSELQPLGVGIY-IKASYLNHSCNPNCVAVFNGTTLVIHATEHIKQGDELTISYTELLCPSYQRKEDLMSRYWFECQCSKCTSSVKEDRLMLSLKCFDPACSGALLHCLD 292          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: T2M5B1_HYDVU (SET and MYND domain-containing protein 3 (Fragment) n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M5B1_HYDVU)

HSP 1 Score: 114 bits (285), Expect = 4.240e-23
Identity = 76/288 (26.39%), Postives = 123/288 (42.71%), Query Frame = 3
Query:  318 VLSCEPLAAVVTDFSST---CAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAAC 1172
            +L  EPLA ++T+       C YC+    +E  + L+CS C+ + YC K+CQ +DWK H+ EC+       ++      LV++L+   Y +++ +                                       + F   A +                           D + L+ + +CN+F +T+ +L  +G  ++ ++AS  NHSC P   ATF GR + +R I+P+  G ELMLSY  +     VRQ EL   Y F C C  C R    D+ + + +CS   C
Sbjct:   37 ILKEEPLACILTNSKYRGIRCDYCY----SEPEKLLKCSKCKFIAYCGKVCQASDWKMHKYECKCLTKSAPKQPPDFCRLVSQLIFNFYYNKKNT----------------------LINNLYANKGNISNARKEAFFTFAAVLVEYLQDVNININDI------------DIYGLMCKASCNSFAITNAELNSLGTGIF-SSASLFNHSCDPNCVATFNGRDISIRAIKPIAEGEELMLSYISILATSDVRQLELRESYMFTCKCTVCSRKEVNDSLMKSVKCSQPQC 285          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A834CFK9_ORYME (N-lysine methyltransferase SMYD2-B n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834CFK9_ORYME)

HSP 1 Score: 107 bits (267), Expect = 2.990e-22
Identity = 77/275 (28.00%), Postives = 113/275 (41.09%), Query Frame = 3
Query:  303 SLSK*VLSCEPLAAV--VTDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRR 1118
            S+ + + SC   ++V  V++  S C  CF      ++   RC  C++ FYC   CQ+ADW  H+ EC A  AFG     + T  LVAR+L    + Q+E  D                                     Q   E  D                            D   L  ++ACN FT+ DD+L  +G A+YP  A   NHSC P++  TF G    +R ++ +  G E+++SY DL  P   R+  L   Y+F C C  C++
Sbjct:   27 SVGELLFSCPAYSSVLSVSERGSCCDLCF----RRKQGLARCGKCKKAFYCNASCQKADWAMHKLECSAMVAFGENWCPSETSRLVARIL-AKKKLQKERCDSEKILLIGEM---------------------------QSHLEDEDNEKKEKTEADIAGLSRFFSKHLEVPSHRDLLTLFSQVACNGFTIEDDELSHMGTAVYPDVALI-NHSCLPSVIVTFNGTKAEVRAVQDMKPGDEVLISYIDLLYPTDDRKSRLRESYYFTCECPECQK 268          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: UPI0009E1FAB5 (histone-lysine N-methyltransferase SMYD3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1FAB5)

HSP 1 Score: 110 bits (276), Expect = 3.180e-22
Identity = 76/274 (27.74%), Postives = 114/274 (41.61%), Query Frame = 3
Query:  369 CAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAACPGPVRR 1190
            C +CF    A+     RCS C+   YC + CQ+  WKDH+ EC    +      T  V L+AR+   M + Q +SG                                         +E  D                          + + + L G+I+CN+FT+ D +L+P+G+ +Y    S  NHSC P   A F G  L +     +  G EL +SYT+L  P + R+++L   Y F CSC +C  P  ED  + + +CS+ +C G V R
Sbjct:   55 CDFCF----AKSEDLQRCSKCKFARYCNRECQKNAWKDHKTECERILSVSPNIPTDLVRLMARI---MQQQQLQSGK----------------------------MSSIYTALVSHQKEFDDERKEAFSAIVTVLNQFVGERDFQKSSSGELFNLFGKISCNSFTICDAELQPLGVGIYQTP-SLLNHSCLPNCVAIFNGTKLLVHATEQIKQGDELAISYTELLCPSYQRKEDLKNRYLFGCSCSKCLSPLEEDGLMLSLQCSNFSCNGAVPR 292          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: B5X414_SALSA (SET and MYND domain-containing protein 3 n=20 Tax=Salmonidae TaxID=8015 RepID=B5X414_SALSA)

HSP 1 Score: 109 bits (273), Expect = 4.790e-22
Identity = 77/262 (29.39%), Postives = 105/262 (40.08%), Query Frame = 3
Query:  330 EPLAAVVTDFSSTCAYCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
            EPLA  V   S+TCA   C+     R+ L RCS C+   YC   CQ+  W DH+ EC+   +   R  T +V L AR++   +R    S                                       QE   +                            A D   LL ++ CN FT++D +LR +G+ LYP+  S  NH CRP+    F G TL LR +R +    EL +SY     P   R+ +L   YHF C C+RC
Sbjct:   33 EPLAYCV---SNTCAKDLCHSCFSRRKTLLRCSQCKVARYCDVTCQKQAWSDHKRECKCLRSLHPRIPTDSVRLAARII---FRLLSPSQTSPGLCSLEEHESHLCDMGEERREGLSQLSSMLQLYIQQEVPNITQ-----------------------ELPAVDPLSLLAKLTCNCFTISDGELREIGVGLYPSM-SLLNHDCRPSCVMLFEGETLHLRAVRDMQPAEELTISYIGTLAPTRDRRTQLEEQYHFTCQCQRC 264          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A673ZQ80_SALTR (SET and MYND domain containing 3 n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673ZQ80_SALTR)

HSP 1 Score: 111 bits (277), Expect = 6.490e-22
Identity = 77/262 (29.39%), Postives = 105/262 (40.08%), Query Frame = 3
Query:  330 EPLAAVVTDFSSTCAYCFCNFVAEERRPL-RCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRVTPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERC 1112
            EPLA  V   S+TCA  FC+     R+ L RCS C+   YC   CQ+  W DH+ EC+   +   R  T +V L AR++   +R    S                                       QE   +                              D   LL ++ CN FT++D +LR +G+ LYP+  S  NH CRP+    F G TL LR +R +    EL +SY     P   R+ +L   YHF C C+RC
Sbjct:   33 EPLACCV---SNTCAKDFCHSCFSRRKTLLRCSQCKVARYCDVTCQKQAWSDHKRECKCLRSLHPRIPTDSVRLAARII---FRLLSPSQTSPGLCSLEEHESHLCDMGEERREGLSQLSSMLQLYIQQEVPNITQ-----------------------ELPTVDPLSLLAKLTCNCFTISDGELREIGVGLYPSM-SLLNHDCRPSCVMLFEGETLHLRAVRDMQPAEELTISYIGTLAPTRDRRTQLEEQYHFTCQCQRC 264          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A8C5AYK1_GADMO (N-lysine methyltransferase SMYD2-A-like n=7 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5AYK1_GADMO)

HSP 1 Score: 108 bits (271), Expect = 1.130e-21
Identity = 82/286 (28.67%), Postives = 119/286 (41.61%), Query Frame = 3
Query:  318 VLSCEPLAAVVT--DFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWL-LLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSD 1163
            + SC   + V++  +  S C YCF      +    RC  C++  YC   CQRADW  H+ EC +  A+G     + TV LVAR+L  M ++Q+E                                            E+A L                          H A L L  ++ACN FTV D++L  +G A+YP  A   NHSC+P++  TF G T  +R + P+    E+M+SY D+  P   R   L   Y+F C C+ C+    + A L   + SD
Sbjct:   32 IFSCPAYSFVLSAKERGSYCEYCF----NRKEGLARCGKCKKACYCNATCQRADWSMHKLECSSMVAYGPNWCPSETVRLVARILASM-KTQKERNASEKLMLIGEMQTHVEDVDNARREVNES--------------EIAGLHRFYSKHLDFPD--------------HSALLALFSQVACNGFTVEDEELSHMGTAVYPDVALI-NHSCQPSVIVTFKGTTAEVRAVTPMKKMDEVMISYIDILYPTDDRNSRLRDSYYFTCDCQECKTQSKDKAKLKVRKRSD 283          
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Match: A0A2I4C9Q0_9TELE (N-lysine methyltransferase SMYD2 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4C9Q0_9TELE)

HSP 1 Score: 108 bits (270), Expect = 1.150e-21
Identity = 79/285 (27.72%), Postives = 117/285 (41.05%), Query Frame = 3
Query:  318 VLSCEPLAAVV--TDFSSTCAYCFCNFVAEERRPLRCSGCQRLFYCRKICQRADWKDHRPECRAFAAFGGRRV-TPTVSLVARLLHCMYRSQRESGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEFREMADLXXXXXXXXXXXXXXXXXXXXXXXXXAHDAWLLLGRIACNTFTVTDDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTELMLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSD 1163
            +LSC   A+V+  T+  + C +CF      +    +C  C++  YC K CQ+ DW  H+ EC A AAFG     + T  LVAR+L  + ++Q+E                                        Q   E  D                            D   L  ++ACN FTV DD+L  +G A+YP  A   NHSC P++  T+   +  +R ++ +  G E+++SY DL  P   R   L   Y+F C C  CR    ++A L   + SD
Sbjct:   28 LLSCPAYASVLSLTERGNCCEFCF----TRKEGLAKCGKCKKACYCNKKCQKGDWAMHKLECSAMAAFGENWCPSETTRLVARIL-AVKKTQKEP---------------------------CVSEKLMTIGELQSHLEDEDNEKRERTEADIAGLYRFYSKHLEIPDHKDLLHLFSQVACNGFTVEDDELSQMGTAIYPDVALI-NHSCLPSVIVTYNETSAEVRAVQDMKPGDEVLISYIDLLYPTDDRNNRLRESYYFTCDCRECRSRSKDNAKLKVRKQSD 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6076.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T0S1B8_SAPDV6.940e-2833.09Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A6H5K4S3_9PHAE2.790e-2727.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI001CF1FE398.670e-2426.81LOW QUALITY PROTEIN: histone-lysine N-methyltransf... [more]
T2M5B1_HYDVU4.240e-2326.39SET and MYND domain-containing protein 3 (Fragment... [more]
A0A834CFK9_ORYME2.990e-2228.00N-lysine methyltransferase SMYD2-B n=1 Tax=Oryzias... [more]
UPI0009E1FAB53.180e-2227.74histone-lysine N-methyltransferase SMYD3-like n=1 ... [more]
B5X414_SALSA4.790e-2229.39SET and MYND domain-containing protein 3 n=20 Tax=... [more]
A0A673ZQ80_SALTR6.490e-2229.39SET and MYND domain containing 3 n=1 Tax=Salmo tru... [more]
A0A8C5AYK1_GADMO1.130e-2128.67N-lysine methyltransferase SMYD2-A-like n=7 Tax=Ga... [more]
A0A2I4C9Q0_9TELE1.150e-2127.72N-lysine methyltransferase SMYD2 n=1 Tax=Austrofun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6076contigP-wetherbeei_contig6076:496..2282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFM9
PFAMsSET,zf-MYND
Model size1787
Max annot lvl2759|Eukaryota
KEGG koko:K11426
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.5e-19
EggNOG OGsCOG2940@1|root,KOG2084@2759|Eukaryota
Descriptionmethyltransferase activity
Cds size1218
COG categoryE
BRITEko00000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.6259458-UTR-P-wetherbeei_contig6076:495..10641683186887.6259458-UTR-P-wetherbeei_contig6076:495..1064Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6076 496..1064 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.6359496-CDS-P-wetherbeei_contig6076:1064..22821683186887.6359496-CDS-P-wetherbeei_contig6076:1064..2282Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6076 1065..2282 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6076.1.1prot_P-wetherbeei_contig6076.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6076 1065..2282 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6076.1.1

>prot_P-wetherbeei_contig6076.1.1 ID=prot_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp
MYRSQRESGDGGGGGGGKAEKTAGTESAAAQITTLVHHMDDRPPATRQEF
REMADLAAAVFAAGGGRHPSGGPPPAAAAAAAHDAWLLLGRIACNTFTVT
DDDLRPVGIALYPAAASAGNHSCRPALCATFLGRTLRLRCIRPVVAGTEL
MLSYTDLARPRHVRQKELAAGYHFRCSCERCRRPPPEDAALDAFRCSDAA
CPGPVRRCRDRRHGHLASLCSGVTVDRGIGGGVGDGGVGNGSGNRGGGGD
GGSCGNSGGFDDGFDVDGDGVGDAAVRWNGAGSIRRGVAIGSSEHYRRWA
AMPDMSCGGAANDRGNDGNGTAGRGGGDGGSGAALENTSGATDHGNDKEI
DDDYGSCSENDATETQDATSETFACMRCGRSLPPAAAATAAAAARRCGEL
QVAGEA
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mRNA from alignment at P-wetherbeei_contig6076:496..2282+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6076.1.1 ID=mRNA_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1787bp|location=Sequence derived from alignment at P-wetherbeei_contig6076:496..2282+ (Phaeothamnion wetherbeei SAG_119_79)
AAATCTCCGAGATGAAATATGCCATCGAATCTCGAAACGTCGGCCGATGC ATCGTCGCCGCGTGCAATTTGAAAGCAGGAGATGAGGTTTGTTTGAGAGC GCATGCGACACAAGGGCTCAATCTCCTACTCCCCTCTCATATGAAGACGT CTTGCCTAGACTTTGAGGATCTCTCGGCTCCAGCCGATCATGCGCTTATG CCTGGCGTTCTAAAACATTTTTCAGCGTTTCCTCTTTTTCAACCTTCCGT AGAATGACTAGATTCCACACGCCGCCCGTGCGTTCTGCATTCTCTCGCCG AATCTCTCTCAAAATAGGTGCTCTCGTGCGAGCCCCTGGCAGCCGTGGTT ACGGACTTCTCCTCGACTTGCGCATACTGCTTTTGCAACTTCGTCGCGGA GGAGCGGCGACCCCTGCGGTGCAGCGGCTGCCAGCGCCTCTTCTACTGCC GGAAGATCTGCCAACGAGCCGATTGGAAGGACCACAGGCCCGAATGCCGG GCTTTTGCCGCCTTCGGGGGCCGTCGCGTGACCCCGACGGTCTCCCTTGT GGCGCGACTCCTCCACTGCATGTATCGCAGCCAGCGCGAGAGCGGTGACG GCGGTGGTGGCGGTGGCGGGAAGGCTGAAAAGACGGCGGGAACCGAGTCG GCGGCTGCCCAAATCACCACTCTGGTTCACCATATGGACGACAGACCGCC TGCAACGCGACAAGAGTTCCGCGAGATGGCGGACCTCGCGGCGGCCGTCT TCGCCGCCGGCGGCGGCCGCCACCCGTCCGGCGGGCCGCCACCCGCAGCA GCCGCCGCCGCCGCCCACGATGCATGGCTGCTGCTGGGCCGGATCGCCTG CAACACCTTCACCGTAACCGACGATGACCTCCGGCCGGTCGGAATCGCGC TCTACCCGGCGGCCGCCTCCGCGGGGAACCACTCCTGCCGGCCGGCGCTT TGCGCGACGTTCCTCGGGCGGACGCTGCGGCTCCGCTGCATCCGTCCCGT CGTGGCAGGCACCGAGCTGATGCTGTCCTACACGGACCTGGCGCGTCCGC GGCACGTCCGGCAGAAGGAGCTGGCGGCGGGCTACCACTTCCGCTGCAGC TGCGAGCGCTGCCGCCGCCCGCCGCCCGAGGACGCGGCACTCGACGCCTT TCGCTGTAGTGATGCCGCCTGTCCGGGCCCAGTCCGCCGCTGTCGGGACC GCCGCCACGGCCATCTCGCCTCGCTGTGCTCCGGCGTCACCGTCGACCGC GGCATCGGCGGCGGTGTCGGCGATGGTGGCGTTGGCAACGGCAGCGGCAA TCGTGGCGGTGGCGGTGATGGCGGCAGCTGTGGCAACAGCGGCGGCTTCG ACGACGGCTTCGACGTCGATGGTGATGGCGTTGGCGACGCCGCCGTGAGA TGGAATGGCGCTGGCAGCATTAGGAGGGGTGTTGCGATTGGGTCGTCTGA GCACTATCGCCGGTGGGCAGCCATGCCGGACATGTCATGTGGCGGCGCTG CCAACGACAGAGGCAACGACGGCAACGGTACTGCTGGCCGCGGAGGCGGC GACGGAGGGAGCGGCGCCGCTCTGGAGAACACCTCGGGTGCAACGGATCA TGGCAACGACAAGGAAATTGACGATGACTATGGTAGCTGTTCGGAAAATG ACGCTACTGAGACACAAGACGCCACATCGGAAACATTTGCCTGCATGCGG TGCGGGCGATCCTTGCCGCCCGCCGCCGCGGCAACGGCAGCCGCGGCGGC GCGGCGCTGCGGCGAGCTGCAGGTGGCGGGGGAGGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6076:496..2282+

>mRNA_P-wetherbeei_contig6076.1.1 ID=mRNA_P-wetherbeei_contig6076.1.1|Name=mRNA_P-wetherbeei_contig6076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig6076:496..2282+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTATCGCAGCCAGCGCGAGAGCGGTGACGGCGGTGGTGGCGGTGGCGG
GAAGGCTGAAAAGACGGCGGGAACCGAGTCGGCGGCTGCCCAAATCACCA
CTCTGGTTCACCATATGGACGACAGACCGCCTGCAACGCGACAAGAGTTC
CGCGAGATGGCGGACCTCGCGGCGGCCGTCTTCGCCGCCGGCGGCGGCCG
CCACCCGTCCGGCGGGCCGCCACCCGCAGCAGCCGCCGCCGCCGCCCACG
ATGCATGGCTGCTGCTGGGCCGGATCGCCTGCAACACCTTCACCGTAACC
GACGATGACCTCCGGCCGGTCGGAATCGCGCTCTACCCGGCGGCCGCCTC
CGCGGGGAACCACTCCTGCCGGCCGGCGCTTTGCGCGACGTTCCTCGGGC
GGACGCTGCGGCTCCGCTGCATCCGTCCCGTCGTGGCAGGCACCGAGCTG
ATGCTGTCCTACACGGACCTGGCGCGTCCGCGGCACGTCCGGCAGAAGGA
GCTGGCGGCGGGCTACCACTTCCGCTGCAGCTGCGAGCGCTGCCGCCGCC
CGCCGCCCGAGGACGCGGCACTCGACGCCTTTCGCTGTAGTGATGCCGCC
TGTCCGGGCCCAGTCCGCCGCTGTCGGGACCGCCGCCACGGCCATCTCGC
CTCGCTGTGCTCCGGCGTCACCGTCGACCGCGGCATCGGCGGCGGTGTCG
GCGATGGTGGCGTTGGCAACGGCAGCGGCAATCGTGGCGGTGGCGGTGAT
GGCGGCAGCTGTGGCAACAGCGGCGGCTTCGACGACGGCTTCGACGTCGA
TGGTGATGGCGTTGGCGACGCCGCCGTGAGATGGAATGGCGCTGGCAGCA
TTAGGAGGGGTGTTGCGATTGGGTCGTCTGAGCACTATCGCCGGTGGGCA
GCCATGCCGGACATGTCATGTGGCGGCGCTGCCAACGACAGAGGCAACGA
CGGCAACGGTACTGCTGGCCGCGGAGGCGGCGACGGAGGGAGCGGCGCCG
CTCTGGAGAACACCTCGGGTGCAACGGATCATGGCAACGACAAGGAAATT
GACGATGACTATGGTAGCTGTTCGGAAAATGACGCTACTGAGACACAAGA
CGCCACATCGGAAACATTTGCCTGCATGCGGTGCGGGCGATCCTTGCCGC
CCGCCGCCGCGGCAACGGCAGCCGCGGCGGCGCGGCGCTGCGGCGAGCTG
CAGGTGGCGGGGGAGGCA
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