mRNA_P-wetherbeei_contig6074.3.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6074.3.5
Unique NamemRNA_P-wetherbeei_contig6074.3.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 791 bits (2044), Expect = 1.350e-280
Identity = 416/588 (70.75%), Postives = 468/588 (79.59%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYDENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAA------------AATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQVRPGEMQSIVGE 1728
            MQLRHL+TV+ PP   GG L + KVTA+AWAPN RKLAVCTADRVVTL+DENGEKRDKFSTKPADKG   Y+VR  XXXXXXXXXXXXXXXXXX VYKLG  WGEKKSICNKFPQ SPVT LTW  ARPN++VFGLA+GKVK+GQL++NKPATLY  +S+V ALA S +GNGVVSAH DG +YRFLFDD G GPSHARL VHP   YALSWG +I  AGND  V+FY  + GG+ERTFDY   P+CKEF+AA FNP+GDAVVVGN+N FYV+  + R G  EE  +KEVENMYTVT+L W++DGSRLAVGTLCGVVDVYDACV+R RY+G FEFTYVSLSQVIVKRL  GARIVLKS FGCEI +INIF+DRYV  NT ETLLLGDL+T +LSE+PW     G E+FIFD  AAALV+ AGELSVVEYGHNEV  AVRTDH+S HLLSVRL+ERP R  A                  +AYL+D QTV VK+LVT A+  V+HD RIDWLELN RGNLLLFRD  RQLHL+N+D  TRTTLLN C YVQWVPDSDV VAQ+R  LCVWYNIHAPDQV   +++  V E
Sbjct:    1 MQLRHLQTVLAPPGE-GGSLPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQVVFYGVD-GGLERTFDYSNSPKCKEFSAAAFNPSGDAVVVGNFNSFYVYAHNHRAGLWEEVGIKEVENMYTVTSLGWKADGSRLAVGTLCGVVDVYDACVKRSRYRGKFEFTYVSLSQVIVKRLGTGARIVLKSHFGCEILKINIFKDRYVAANTTETLLLGDLETLKLSEVPWNFNSGG-EKFIFDAPAAALVFAAGELSVVEYGHNEVAAAVRTDHISAHLLSVRLNERPPRTGAPDDPDTPRADEHDGQNKKMAYLLDAQTVNVKNLVTQASVTVNHDCRIDWLELNSRGNLLLFRDKRRQLHLFNVDNQTRTTLLNLCNYVQWVPDSDVVVAQSRTSLCVWYNIHAPDQVTNHQIKGDVYE 585          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A2P4WWG2_9STRA (Intraflagellar transport protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWG2_9STRA)

HSP 1 Score: 677 bits (1748), Expect = 6.740e-233
Identity = 345/573 (60.21%), Postives = 436/573 (76.09%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD-ENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAAAA--------TVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL +++Q  A  G    + KVTA+A++PN R+LAV T DRVV L+D + GE++DKFSTKPADKG   Y+VR   XXXXXXXXXXXXXX    VYK+G+ WG+KKSICNKF Q S VT LTWP+  PNE+VFGLA+GKVK+GQL+SNKPATLY T SYV+ +  +P G  ++SAH DG +YRF+FDD   GP+HA+LVVH    YALSWG +I  AGND  V FYD + GG  RTFDY GD +C EFT + FNPTG++VVVGN++ FY F    +T + E    K + N+Y+VTAL+W++DGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKRLA GAR+V++S FGCE+T++N+FQDR++VGNT  TLL+GDLDT R+SE+ WQ  GA  E+++ D+ +  +VY AGELS++EYG NE+LG VRT+H++ HLLSVR++ERP                   +AYL+D QT+ + DL   A + V+HD+R+DWLELN RGNLLLFRD  RQLHL++LDT  R+TLLNYC YVQWVP+SDV VAQNRG L VWYNI +PD+
Sbjct:    1 MQLRHLTSLLQ--ATEG----MCKVTAIAFSPNNRRLAVVTVDRVVHLFDAQTGERKDKFSTKPADKGDKNYIVRALEXXXXXXXXXXXXXXNIIFVYKIGVEWGDKKSICNKFAQPSSVTTLTWPSTHPNEIVFGLADGKVKIGQLRSNKPATLYATGSYVSRVCSNPEGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCVPYALSWGESIVAAGNDRRVSFYDKD-GGQLRTFDYSGDEKCGEFTCSVFNPTGESVVVGNFDSFYTFNFQHKTESWELVGTKSIPNLYSVTALAWKNDGSRLAVGSVCGALDMYDACVRRYRYKGKFEFTYVSLSQVIVKRLATGARVVVRSAFGCEVTKLNVFQDRFLVGNTTNTLLVGDLDTARISEVQWQSTGA--EKYMLDNESVCIVYQAGELSLIEYGQNELLGCVRTEHLNTHLLSVRINERPPLPMPQDGGDPIPPPENKKIAYLLDLQTICITDLHARAASTVNHDSRVDWLELNSRGNLLLFRDKRRQLHLFDLDTQKRSTLLNYCNYVQWVPESDVVVAQNRGNLSVWYNIRSPDK 564          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 699 bits (1803), Expect = 2.770e-232
Identity = 360/588 (61.22%), Postives = 414/588 (70.41%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQ-LQIFKVTAVAWAPNGRKLAVCTADRVVTLYDENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNE-VLGAVRTDHVSPHLLSVRLDERP----------RRAAAAAATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQVRPGEMQSIVGE 1728
            MQLRHL T++QP    GG   ++ KV AVAWAPN RKLAVCTADRVV LYDENGEKRD+FSTKPA+KG   Y+VR                     VYKLGL WGE KSICNKFPQ SP+TC++WP ARPNE+VFGLAEGKVK+GQLKSN+PATLY  +S+  ALA SP+GNGVVSAH DGTLYRFLFDD G  PSH +LV+HPS  YALSWG +I  AGNDG V+FYD + GG+ERTFDY  DP C+EFT A FNPTGDAVV+GNY+ F+VF    R G  EEA V+ VENMYTVTAL WR+DGSRLAVG+LCG VDVYDACV+R RYKG FE TYVSLSQVIVKRL++G+RIVLKS F CEI+R+NI+QDR                                                 EL++ EY  NE +LGAVRT+H+S HLLSV L ++P          RR      T  +AYL+D QT+ +KDLVT AT+ VSHD++IDWLELN R +LLLFRD  R+LHLYNL T TR TLLNYC YVQWVPDSDV VAQNRG LCVWYNIHAPDQV   E++  V E
Sbjct:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDAD-GGMERTFDYSSDPSCREFTTAAFNPTGDAVVLGNYDSFHVFAHSHRAGTWEEAGVRNVENMYTVTALGWRADGSRLAVGSLCGSVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEISRVNIYQDR-------------------------------------------------ELTIGEYARNEGILGAVRTEHISAHLLSVCLSDKPPRRGDRDLARRRQNVTEGTKTVAYLLDAQTINIKDLVTNATSSVSHDSKIDWLELNSRADLLLFRDRRRRLHLYNLRTQTRGTLLNYCTYVQWVPDSDVVVAQNRGALCVWYNIHAPDQVTTHEIKGEVYE 537          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A5D6XF22_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XF22_9STRA)

HSP 1 Score: 687 bits (1774), Expect = 4.420e-227
Identity = 354/583 (60.72%), Postives = 448/583 (76.84%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD-ENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAA------------------AATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL +++Q  A  G    + KVTAVAW+PN R+LAV T DRVV ++D + GE++DKFSTKPADKG   Y+VR XXXXXXXXXXXXXXXXXX  +YK+GL WG+KKSICNKFPQ+  +T L WP+  PNE+VFGLA+GKVKVGQL+SNKPATLY + SYV A+  +P G  V+SAH DG +YRF+FDD   GP+H ++ VH    YALSWG +I  AGND  V FYD + GGV RTFDY  D +C EFT + FNPTGD+VVVGN+N FY +    +T + E   VK +EN+Y+VTAL+W+ DGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKRL+NGAR+V++S FGCEIT+IN+FQDR++VGNT  TLL+GDLDT ++SE+ WQ   AG E+++F++ +A +VY AGELS++EYG N++LG+VRT+H+S HLLSVR++ER ++ A A                  A +  +A+L+D QT++VKDL   A+  ++HD+RIDWLELN RG+LLLFRD  RQLHL++LD   R+TLLNYC YVQWVPDSDV VAQNR  L VWYNI APD+
Sbjct:   16 MQLRHLTSLLQ--ATEG----MCKVTAVAWSPNNRRLAVVTIDRVVHMFDAQTGERKDKFSTKPADKGEKNYVVRAXXXXXXXXXXXXXXXXXXVFIYKIGLEWGDKKSICNKFPQSCSITALAWPSTHPNEIVFGLADGKVKVGQLRSNKPATLYASGSYVAAVCANPEGTAVLSAHYDGAVYRFVFDDVNGGPTHTKIAVHSCVPYALSWGESIVAAGNDRKVTFYDKD-GGVLRTFDYSSDDKCGEFTCSVFNPTGDSVVVGNFNSFYTYNFQLKTESWEAVGVKTIENLYSVTALAWKCDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLSNGARVVVRSSFGCEITKINVFQDRFLVGNTTNTLLVGDLDTAKISEVQWQS--AGSEKYMFENESACIVYQAGELSLIEYGQNDILGSVRTEHLSTHLLSVRINERAQQLADAGSAHSKTLPTAGSGGPETAESKKVAFLLDLQTISVKDLHLHASTTINHDSRIDWLELNSRGSLLLFRDKRRQLHLFDLDAQRRSTLLNYCNYVQWVPDSDVVVAQNRTNLSVWYNIRAPDK 589          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 679 bits (1752), Expect = 4.760e-224
Identity = 332/584 (56.85%), Postives = 426/584 (72.95%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD-ENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAAAATVA-------------------LAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL +++  PA  G    + KVTAVAW+PN ++LAV T DRVV ++D + GE++DKFSTKPADKG   Y+VR                     +YK+GL WG+KKSICNKFPQ++ +T LTWP   PNE+VFGLA+GKVK+GQL+SNKPATLY + SYV+ +  +  G  ++S H DG+++RF+FDD   GP++ ++ VH    YALSWG +I  AGND  V FYD + GG+ RTFDY  D +C EFT + FNPTGDAVVVGN+N FY F    +T + E   VK +EN+++VTAL+W+SDGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKRLANGAR+V++S FGCEIT++N+FQDR+++GNT  TLLLGDL+T +LSE+ WQ    G E+++F++ +A +VY AGELS++EYG NE+LG+VRT+H++ HLLSVR++ERP  A  AA                       +AYL+D QT+AVKDL    T  ++HDARIDWLELN RGNLLLFRD  RQLHL+  +T  R+TLLNYC YVQWVP+SDV VAQNR  L VWYNI APD+
Sbjct:    1 MQLRHLTSLL--PATEG----MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRVAFYDRD-GGLIRTFDYSNDEKCGEFTTSVFNPTGDAVVVGNFNSFYAFNYQLKTQSWESVGVKTIENLFSVTALAWKSDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLANGARVVVRSQFGCEITKLNVFQDRFLIGNTTNTLLLGDLETGKLSEVQWQS--TGMEKYMFENESACIVYQAGELSLIEYGQNELLGSVRTEHLNSHLLSVRINERPNLADVAAVAQQQQLQRGGGSATPEITENKKIAYLLDLQTIAVKDLHFHTTTTINHDARIDWLELNSRGNLLLFRDKRRQLHLFENETQRRSTLLNYCNYVQWVPESDVVVAQNRTNLSVWYNIRAPDK 575          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A7S2W0W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0W8_9STRA)

HSP 1 Score: 678 bits (1749), Expect = 7.860e-224
Identity = 356/581 (61.27%), Postives = 446/581 (76.76%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYDENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAAAATVA-----LAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQVRPGEMQSIVGE 1728
            MQL  ++ +M      G    I KVTA+ ++PN ++LAVC  DR+V LYDENGE+R+KFSTKPADK    Y VRXXXXXXXXXXXXXXXXXXXXX  KLGL WG+KKSICNKF Q SP+T L WPA+R NE+V+GLAEGKVKVG +++NKPATLY+TES+V A+A +P+G GVVSAHLDG++YRFLF +GG     A++  HP   YAL W  +I  AGND  VIFYD + GG ERTFDY  DP+C+EFT A  NPTG+ V++GN++  YV++ +  T + EE  VK+V N+Y+VTAL W+ DG R+AVG++CG +D+YDAC++R RYKG +EF YVSLSQVIVKRL+NG+RIVLKS +G EI +INIFQDRYVV NT +TLLLGDL+TF+LSE+ W   G G E+F+FD+ +  +VYHAGELS++EYG NE LG+VRT+++S HLLSVR++ER      AA         +AYL+D QTVA+KDLVT  +  ++HD++IDW+ELN RGNLLLFRD  R LHLY++D   R TLLN+C YVQWVPDSDV VAQNR  LCVWYNIHAPDQV   +++  V E
Sbjct:    1 MQLTFMQALM------GAAGGINKVTAICFSPNDKRLAVCLQDRIVYLYDENGERREKFSTKPADKAQKEYTVRXXXXXXXXXXXXXXXXXXXXXXXKLGLKWGDKKSICNKFIQTSPITDLVWPASRGNEVVYGLAEGKVKVGVIRTNKPATLYSTESFVVAVAANPDGTGVVSAHLDGSIYRFLFVEGGAA---AKIAHHPCVPYALGWAAHIVVAGNDSQVIFYDSD-GGQERTFDYSNDPKCREFTKAVVNPTGETVMLGNFDSLYVYSLNKSTESWEEVGVKQVPNLYSVTALGWKGDGGRVAVGSVCGQLDLYDACLRRSRYKGKYEFIYVSLSQVIVKRLSNGSRIVLKSLYGFEIVKINIFQDRYVVANTTQTLLLGDLETFKLSEVQWFKNGGGGEKFVFDNPSVCMVYHAGELSLIEYGSNEPLGSVRTEYISGHLLSVRINERAVGGDGAAPDTEEDSKQIAYLLDTQTVALKDLVTQTSATINHDSKIDWIELNTRGNLLLFRDKRRHLHLYDVDQQIRHTLLNFCTYVQWVPDSDVVVAQNRSNLCVWYNIHAPDQVTVHQIKGDVEE 571          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: H3GS66_PHYRM (Uncharacterized protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3GS66_PHYRM)

HSP 1 Score: 673 bits (1737), Expect = 6.120e-222
Identity = 347/573 (60.56%), Postives = 438/573 (76.44%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD-ENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRA--------AAAAATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL +++Q  A  G    + KVTA+A++PN R+LAV T DRVV L+D + GE++DKFSTKPADKG   Y+VR  XXXXXXXXXXXXXXXXX  VYK+GL WG+KKSICNKF Q S VT LTWP+  PNE+VFGLA+GKVK+GQL+SNKPATLY + SYV+ +  +P G  ++SAH DG +YRF+FDD   GP+HA+LVVH    YALSWG +I  AGND  V FYD + G   RTFDY GD +C EFT + FNPTG++VVVGN++ FY F    +T + E    K + N+Y+VTAL+W+ DGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKRLA GAR+V++S FGCEIT++N+FQDR++VGNT  T+L+GDLDT R+SE+ WQ  GA  E+++ D+ +  +VY AGELS++EYG NE+LG+VRT+H++ HLLSVR++ERP                   +AYL+D QT+ + DL   A + V+HD+R+DWLELN RGNLLLFRD  RQLHL++LDT  R+TLLNYC YVQWVP+SDV VAQNRG L VWYNI +PD+
Sbjct:    1 MQLRHLTSLLQ--ATEG----MCKVTAIAFSPNNRRLAVVTVDRVVHLFDAQTGERKDKFSTKPADKGDKNYIVRALXXXXXXXXXXXXXXXXXVFVYKIGLEWGDKKSICNKFAQPSSVTTLTWPSTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSRVCSNPEGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCVPYALSWGESIVAAGNDRRVSFYDKD-GAQLRTFDYSGDEKCGEFTCSVFNPTGESVVVGNFDSFYTFNFQHKTESWELVGSKSIPNLYSVTALAWKHDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLATGARVVVRSAFGCEITKLNVFQDRFLVGNTTNTILVGDLDTSRISEVQWQSTGA--EKYMLDNESVCVVYQAGELSLIEYGQNELLGSVRTEHLNTHLLSVRINERPPLPMPQDGGDPTQPQENKKIAYLLDLQTICITDLHARAASTVNHDSRVDWLELNSRGNLLLFRDKRRQLHLFDLDTQKRSTLLNYCNYVQWVPESDVVVAQNRGNLSVWYNIRSPDK 564          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: F0Y092_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y092_AURAN)

HSP 1 Score: 672 bits (1733), Expect = 1.780e-221
Identity = 346/603 (57.38%), Postives = 426/603 (70.65%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPG---GQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYDENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPA----YALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPR-------------CKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTP------ETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERP------------RRAAAAAATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQV 1695
            MQLRHL T++  PA  G   G++   K+TA+ ++PN RKLAVC  DRVV L+D+ G+  DKFSTKPADKG   Y+VR                     VYKLGL WG+KKSICNKF QASP+T LTWP++RPNELV+GLAEGKVKVGQL++NKPATLYTT+SYV A+A S +G+GV S+H+DG+++RF F    +       + H + A    YAL+WGH+I   GNDG V+FYD + GG+E+ FDY   P              C EFT A FNPTG+ VV+GN+N FY +T   R    EE   K +EN+Y VT+++W++DG+RLAVG+L G +D+YDACV+R RYKG FEFTY SLSQVIVKRL  G RIVLKS +GCEIT+INIFQDRYVV NT       ETLLLGDL T++LSEI W  GG   E+F+FD+    +VYHAGEL++VEYG NE LG VRTDH+S HLLSVR++ERP            R  ++      +AYL+D QT+ +KDLVTG++  VS D++IDWLELNGR +LLLFRD  RQLHLY+++T TRTTLLNYC YVQWVPDSDV VAQNR  LCVWYNIH PDQV
Sbjct:    1 MQLRHLCTLL--PANGGTTSGRVHDGKITAICYSPNNRKLAVCGMDRVVRLFDDQGDPVDKFSTKPADKGPKTYVVRAMHFSPDSSKLAIAQSDNIVFVYKLGLEWGDKKSICNKFLQASPITGLTWPSSRPNELVYGLAEGKVKVGQLRTNKPATLYTTDSYVCAVASSADGHGVCSSHIDGSIHRFFFHQACI--RWPTDLFHKNLARCVPYALAWGHSIVVGGNDGTVVFYD-DQGGIEKRFDYSDSPHSGDAEPNSKGGCFCGEFTIAAFNPTGETVVLGNWNSFYTYTYKQRQDLWEEIGPKMIENLYAVTSVAWKNDGTRLAVGSLFGSLDLYDACVRRYRYKGKFEFTYSSLSQVIVKRLETGTRIVLKSLYGCEITKINIFQDRYVVANTTDHGTSTETLLLGDLATYKLSEISWSNGG--NEKFVFDNPVCCIVYHAGELALVEYGCNETLGTVRTDHISGHLLSVRINERPSPTDGSPPLDDERERSSGLDNKKIAYLLDAQTINIKDLVTGSSTTVSQDSKIDWLELNGRASLLLFRDRRRQLHLYDIETQTRTTLLNYCTYVQWVPDSDVVVAQNRNNLCVWYNIHTPDQV 596          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)

HSP 1 Score: 671 bits (1732), Expect = 3.130e-221
Identity = 330/573 (57.59%), Postives = 420/573 (73.30%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD-ENGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRR--------AAAAAATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL +++Q  A  G    + KVTA+A++PN R+LAV T DRVV L+D + GE++DKFSTKPADKG   Y+VR                     VYK+GL +G+KKSICNKFPQ S VT LTWP+  PNE+VFGLA+GKVK+G L+SNKPATLY T SYV+ +  +P+G  ++SAH DG +YRF+FDD   GP+HA+LVVH    YALSWG +I  AGND  V FYD + G   RTFDY  D +C EFT + FNPTG++ VVGN+N FY F    +T + E    K + N+Y+VTAL+W+ DGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKRLA GAR++++S FGCEIT+IN+FQDRY+VGNT  TLL  DLDT  +SE+ WQ  GA  E+++FD+ +  +VY AGELS++EYG NE+LG+VRT+H++ HLLSVR++ERP R        A        +AYL+D QT+ + DL T + + V+HD+R+DW+ELN RGNLLLFRD  RQLHL++L+T  R+TLLNYC YVQWVPDSDV VAQNR  L VWYNI +PD+
Sbjct:    1 MQLRHLTSLLQ--ATEG----MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVSFYDKD-GAQLRTFDYSSDDKCGEFTCSVFNPTGESAVVGNFNSFYTFHYKHKTESWELVGAKRIPNLYSVTALAWKPDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLATGARVIVRSAFGCEITKINVFQDRYLVGNTTNTLLAVDLDTAHISEVQWQSTGA--EKYMFDNESVCIVYQAGELSLIEYGQNELLGSVRTEHLNTHLLSVRINERPVRVMTPDNGDAGPPQENKKIAYLLDLQTICITDLHTHSASTVNHDSRVDWMELNSRGNLLLFRDKRRQLHLFDLETQKRSTLLNYCNYVQWVPDSDVVVAQNRNNLSVWYNIRSPDK 564          
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Match: A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)

HSP 1 Score: 649 bits (1673), Expect = 1.760e-220
Identity = 318/575 (55.30%), Postives = 409/575 (71.13%), Query Frame = 1
Query:    1 MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYDE-NGEKRDKFSTKPADKGAGPYLVRXXXXXXXXXXXXXXXXXXXXXVYKLGLGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNKPATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLVVHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRC-KEFTAAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSWRSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANGARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGGGAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVRLDERPRRAAAAAATVAL---------AYLMDQQTVAVKDLVTGATNPVSHDARIDWLELNGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNRGELCVWYNIHAPDQ 1692
            MQLRHL TV+ P         + KVTA+AW+PN R+LAV T +RVV ++D   GE++DKFSTKPA+KG   YLV+                     +YKLGL WG+KKSICNKF Q + VT + WP + PNE+VFGL++GKVK+GQL+SNKPATLY T SYV+ L  +  G  ++S+H D ++YRF+FDD   G S  ++ +H    YALSWG  I  AGND  V FYD + GG  R+FDY  D  C  EFT + FNPTGD+ VVGN+N FYVF    +T + E   VK VEN+Y+VT+L W+ DGSRLAVG++CG +D+YDACV+R RYKG FEFTYVSLSQVIVKR+A GAR++++S FGCEIT+IN+FQDR++V NT  TLL+GDLDT +LSE+ WQ    G E+++FD+ A  +VY AGELS++EYG +EVLG+VRT+H++ HLLSVR++ERP +         L         A+L+D QT++VKD+    +  ++HD+R+DWLELN   NLLLFRD  RQLHL+++DT TR TLLNYC YVQWVPDSDV VAQNR  L VWYNI +PD+
Sbjct:    1 MQLRHLSTVLPPTE------GMCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVTFYDKD-GGTVRSFDYSSDDNCCGEFTTSVFNPTGDSCVVGNFNSFYVFNYLVKTDSWEAVGVKTVENLYSVTSLGWKFDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRIATGARVIVRSSFGCEITKINVFQDRFLVANTSSTLLVGDLDTAKLSEVQWQS--TGSEKYMFDNPAVCIVYQAGELSLIEYGQSEVLGSVRTEHLNLHLLSVRINERPVQIVPTDGKPPLTPLDDNKKMAFLLDLQTISVKDMHNHTSTTINHDSRVDWLELNAHANLLLFRDKRRQLHLFDMDTQTRITLLNYCNYVQWVPDSDVVVAQNRTSLYVWYNIRSPDK 566          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6074.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVD3_9STRA1.350e-28070.75Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A2P4WWG2_9STRA6.740e-23360.21Intraflagellar transport protein (Fragment) n=1 Ta... [more]
D8LUB7_ECTSI2.770e-23261.22Intraflagellar transport protein 172 n=1 Tax=Ectoc... [more]
A0A5D6XF22_9STRA4.420e-22760.72Uncharacterized protein (Fragment) n=2 Tax=Pythiac... [more]
A0A8K1FJC7_PYTOL4.760e-22456.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2W0W8_9STRA7.860e-22461.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3GS66_PHYRM6.120e-22260.56Uncharacterized protein n=27 Tax=Peronosporaceae T... [more]
F0Y092_AURAN1.780e-22157.38Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0P1AMT9_PLAHL3.130e-22157.59Intraflagellar transport protein 172 n=1 Tax=Plasm... [more]
A0A397EVR2_9STRA1.760e-22055.30Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6074contigP-wetherbeei_contig6074:1616..3511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LUB7
Preferred nameIFT172
PFAMsWD40
Model size1728
Max annot lvl2759|Eukaryota
KEGG koko:K19676
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000226,GO:0001501,GO:0001654,GO:0001655,GO:0001822,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0002119,GO:0002164,GO:0003002,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008589,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021915,GO:0021953,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031122,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0031514,GO:0031982,GO:0032006,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0035050,GO:0035148,GO:0035239,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036126,GO:0040024,GO:0042073,GO:0042127,GO:0042592,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045494,GO:0045880,GO:0045892,GO:0045934,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048565,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055115,GO:0055123,GO:0060021,GO:0060041,GO:0060173,GO:0060249,GO:0060255,GO:0060271,GO:0060322,GO:0060348,GO:0060429,GO:0060562,GO:0060606,GO:0060972,GO:0061371,GO:0061525,GO:0065007,GO:0065008,GO:0070925,GO:0070986,GO:0071704,GO:0071840,GO:0072001,GO:0072175,GO:0072359,GO:0080090,GO:0097014,GO:0097223,GO:0097225,GO:0097228,GO:0097435,GO:0097542,GO:0097598,GO:0097708,GO:0097729,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902531,GO:1902679,GO:1903506,GO:1903507,GO:1905515,GO:2000112,GO:2000113,GO:2001141
Exons2
Evalue4.54e-233
EggNOG OGsKOG3616@1|root,KOG3616@2759|Eukaryota
Ec32 ortholog descriptionIntraflagellar transport protein 172
Ec32 orthologEc-14_004390.1
Descriptioncilium assembly
Cds size1728
COG categoryS
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.4929304-CDS-P-wetherbeei_contig6074:1615..30131683186887.4929304-CDS-P-wetherbeei_contig6074:1615..3013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6074 1616..3013 +
1683186887.5052433-CDS-P-wetherbeei_contig6074:3181..35111683186887.5052433-CDS-P-wetherbeei_contig6074:3181..3511Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6074 3182..3511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6074.3.5prot_P-wetherbeei_contig6074.3.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6074 1616..3511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6074.3.5

>prot_P-wetherbeei_contig6074.3.5 ID=prot_P-wetherbeei_contig6074.3.5|Name=mRNA_P-wetherbeei_contig6074.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=576bp
MQLRHLKTVMQPPAPPGGQLQIFKVTAVAWAPNGRKLAVCTADRVVTLYD
ENGEKRDKFSTKPADKGAGPYLVRALAFSPDGAKLAVAQSDNIVFVYKLG
LGWGEKKSICNKFPQASPVTCLTWPAARPNELVFGLAEGKVKVGQLKSNK
PATLYTTESYVTALACSPNGNGVVSAHLDGTLYRFLFDDGGVGPSHARLV
VHPSPAYALSWGHNICCAGNDGLVIFYDPESGGVERTFDYGGDPRCKEFT
AAEFNPTGDAVVVGNYNRFYVFTCDPRTGACEEAAVKEVENMYTVTALSW
RSDGSRLAVGTLCGVVDVYDACVQRMRYKGNFEFTYVSLSQVIVKRLANG
ARIVLKSGFGCEITRINIFQDRYVVGNTPETLLLGDLDTFRLSEIPWQGG
GAGKERFIFDHRAAALVYHAGELSVVEYGHNEVLGAVRTDHVSPHLLSVR
LDERPRRAAAAAATVALAYLMDQQTVAVKDLVTGATNPVSHDARIDWLEL
NGRGNLLLFRDCHRQLHLYNLDTATRTTLLNYCGYVQWVPDSDVAVAQNR
GELCVWYNIHAPDQVRPGEMQSIVGE
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mRNA from alignment at P-wetherbeei_contig6074:1616..3511+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6074.3.5 ID=mRNA_P-wetherbeei_contig6074.3.5|Name=mRNA_P-wetherbeei_contig6074.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1896bp|location=Sequence derived from alignment at P-wetherbeei_contig6074:1616..3511+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCTGCGACATTTAAAGACGGTAATGCAGCCGCCGGCTCCTCCGGG GGGGCAGCTCCAGATCTTCAAAGTCACGGCCGTCGCCTGGGCCCCGAACG GCCGCAAGCTGGCCGTCTGCACTGCAGACCGGGTGGTGACGCTTTACGAT GAGAACGGCGAGAAACGCGACAAATTTAGCACCAAGCCGGCCGACAAGGG CGCCGGCCCGTACCTCGTGCGCGCCCTGGCCTTCAGCCCGGACGGCGCCA AGCTGGCCGTGGCGCAGAGCGACAACATTGTTTTCGTCTACAAGCTTGGT CTGGGATGGGGCGAAAAGAAGTCCATCTGCAACAAGTTTCCCCAGGCGAG CCCCGTCACCTGCCTGACCTGGCCAGCGGCGCGGCCGAACGAGCTGGTGT TCGGCCTCGCCGAAGGCAAAGTCAAAGTCGGCCAGCTCAAGTCCAACAAG CCGGCGACGCTCTACACGACGGAGTCGTACGTGACGGCGCTGGCCTGCAG CCCCAATGGCAACGGCGTTGTCTCGGCGCATCTCGACGGCACCCTCTACC GCTTTCTCTTCGACGACGGCGGCGTCGGTCCGTCCCACGCGCGGCTGGTG GTACACCCGTCGCCGGCCTACGCGCTGAGCTGGGGCCACAACATTTGCTG CGCTGGAAACGACGGGCTCGTCATCTTTTATGACCCCGAGTCAGGCGGCG TCGAGCGCACCTTCGACTACGGCGGCGACCCGCGCTGCAAGGAATTCACC GCCGCCGAGTTCAACCCGACGGGGGACGCCGTTGTCGTCGGCAACTACAA CCGGTTCTACGTCTTTACGTGCGATCCGCGCACCGGCGCCTGCGAGGAGG CCGCCGTGAAGGAAGTCGAGAACATGTACACGGTGACGGCGCTGTCGTGG CGCAGCGACGGCTCCCGGTTGGCCGTCGGCACGCTCTGTGGCGTGGTCGA CGTTTACGACGCGTGCGTGCAGCGCATGCGCTACAAGGGAAACTTCGAAT TCACCTACGTGTCGCTCAGCCAGGTCATCGTGAAGCGGCTGGCCAACGGT GCCCGCATTGTACTCAAATCCGGCTTCGGCTGCGAGATCACCCGCATCAA CATCTTCCAGGATCGCTACGTCGTCGGCAACACACCCGAGACGCTCCTGC TCGGCGACCTGGACACGTTCCGGCTGAGCGAGATCCCGTGGCAGGGTGGC GGCGCCGGCAAGGAGCGCTTCATCTTCGACCACCGCGCGGCAGCATTAGT CTACCACGCCGGCGAGCTGAGCGTTGTCGAATACGGCCACAACGAAGTTT TGGGCGCCGTCCGCACCGACCACGTCAGTCCGCACCTCCTCAGCGTGCGG CTGGACGAGCGCCCCCGCCGCGCCGCCGCCGCAGCCGCCACCGTCGCCGT CGCTGCCGCTGCGACCGCCGCCACTGCCGCTGGGGCGACATCGGCCGACG ACGACGACCCGGCGGCCGCCGCCGCCGCCGCCGCGGCCGCCGCTGCCGCC TACCCGCTGGATGGCGGCGAAGCCGGTGGCATCGGCGGCGCCGACGCCGG CGTGCCGAGCAAAAAGCTGGCGTACCTGATGGACCAGCAGACGGTGGCGG TGAAGGACTTGGTGACGGGGGCGACCAACCCGGTAAGCCACGACGCGCGC ATCGACTGGCTGGAGTTGAACGGGCGCGGCAACCTGCTGTTGTTCCGGGA CTGCCACCGACAGCTGCACCTCTACAACTTGGATACGGCGACGCGCACGA CGCTGCTCAACTACTGCGGCTACGTGCAGTGGGTGCCCGACAGTGATGTG GCCGTGGCGCAGAACCGCGGGGAGCTCTGCGTGTGGTACAATATCCACGC GCCCGACCAGGTGAGGCCAGGCGAGATGCAGAGCATCGTGGGAGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6074:1616..3511+

>mRNA_P-wetherbeei_contig6074.3.5 ID=mRNA_P-wetherbeei_contig6074.3.5|Name=mRNA_P-wetherbeei_contig6074.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1728bp|location=Sequence derived from alignment at P-wetherbeei_contig6074:1616..3511+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCTGCGACATTTAAAGACGGTAATGCAGCCGCCGGCTCCTCCGGG
GGGGCAGCTCCAGATCTTCAAAGTCACGGCCGTCGCCTGGGCCCCGAACG
GCCGCAAGCTGGCCGTCTGCACTGCAGACCGGGTGGTGACGCTTTACGAT
GAGAACGGCGAGAAACGCGACAAATTTAGCACCAAGCCGGCCGACAAGGG
CGCCGGCCCGTACCTCGTGCGCGCCCTGGCCTTCAGCCCGGACGGCGCCA
AGCTGGCCGTGGCGCAGAGCGACAACATTGTTTTCGTCTACAAGCTTGGT
CTGGGATGGGGCGAAAAGAAGTCCATCTGCAACAAGTTTCCCCAGGCGAG
CCCCGTCACCTGCCTGACCTGGCCAGCGGCGCGGCCGAACGAGCTGGTGT
TCGGCCTCGCCGAAGGCAAAGTCAAAGTCGGCCAGCTCAAGTCCAACAAG
CCGGCGACGCTCTACACGACGGAGTCGTACGTGACGGCGCTGGCCTGCAG
CCCCAATGGCAACGGCGTTGTCTCGGCGCATCTCGACGGCACCCTCTACC
GCTTTCTCTTCGACGACGGCGGCGTCGGTCCGTCCCACGCGCGGCTGGTG
GTACACCCGTCGCCGGCCTACGCGCTGAGCTGGGGCCACAACATTTGCTG
CGCTGGAAACGACGGGCTCGTCATCTTTTATGACCCCGAGTCAGGCGGCG
TCGAGCGCACCTTCGACTACGGCGGCGACCCGCGCTGCAAGGAATTCACC
GCCGCCGAGTTCAACCCGACGGGGGACGCCGTTGTCGTCGGCAACTACAA
CCGGTTCTACGTCTTTACGTGCGATCCGCGCACCGGCGCCTGCGAGGAGG
CCGCCGTGAAGGAAGTCGAGAACATGTACACGGTGACGGCGCTGTCGTGG
CGCAGCGACGGCTCCCGGTTGGCCGTCGGCACGCTCTGTGGCGTGGTCGA
CGTTTACGACGCGTGCGTGCAGCGCATGCGCTACAAGGGAAACTTCGAAT
TCACCTACGTGTCGCTCAGCCAGGTCATCGTGAAGCGGCTGGCCAACGGT
GCCCGCATTGTACTCAAATCCGGCTTCGGCTGCGAGATCACCCGCATCAA
CATCTTCCAGGATCGCTACGTCGTCGGCAACACACCCGAGACGCTCCTGC
TCGGCGACCTGGACACGTTCCGGCTGAGCGAGATCCCGTGGCAGGGTGGC
GGCGCCGGCAAGGAGCGCTTCATCTTCGACCACCGCGCGGCAGCATTAGT
CTACCACGCCGGCGAGCTGAGCGTTGTCGAATACGGCCACAACGAAGTTT
TGGGCGCCGTCCGCACCGACCACGTCAGTCCGCACCTCCTCAGCGTGCGG
CTGGACGAGCGCCCCCGCCGCGCCGCCGCCGCAGCCGCCACCGTCGCCCT
GGCGTACCTGATGGACCAGCAGACGGTGGCGGTGAAGGACTTGGTGACGG
GGGCGACCAACCCGGTAAGCCACGACGCGCGCATCGACTGGCTGGAGTTG
AACGGGCGCGGCAACCTGCTGTTGTTCCGGGACTGCCACCGACAGCTGCA
CCTCTACAACTTGGATACGGCGACGCGCACGACGCTGCTCAACTACTGCG
GCTACGTGCAGTGGGTGCCCGACAGTGATGTGGCCGTGGCGCAGAACCGC
GGGGAGCTCTGCGTGTGGTACAATATCCACGCGCCCGACCAGGTGAGGCC
AGGCGAGATGCAGAGCATCGTGGGAGAG
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