mRNA_P-wetherbeei_contig6073.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6073.3.1
Unique NamemRNA_P-wetherbeei_contig6073.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.650e-10
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSFTQ 123
            GV+FRK PD G MKGLAFI DPDGYS+EIL    M+  F++
Sbjct:  145 GVKFRKTPDGGNMKGLAFIFDPDGYSIEILGADQMSKDFSK 185
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: V4A5I4_LOTGI (Lactoylglutathione lyase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A5I4_LOTGI)

HSP 1 Score: 60.5 bits (145), Expect = 4.670e-10
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNM 105
            GVQF+K+PDEG MKGLAFI+DPDGY +EIL  +NM
Sbjct:  137 GVQFKKKPDEGVMKGLAFIMDPDGYWIEILNPKNM 171
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: I4MYU8_9PSED (Lactoylglutathione lyase n=1 Tax=Pseudomonas sp. M47T1 TaxID=1179778 RepID=I4MYU8_9PSED)

HSP 1 Score: 60.1 bits (144), Expect = 5.940e-10
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMAD 111
            GVQF KRPDEG MKGLAFI DPDGY +EILA +++A+
Sbjct:  126 GVQFVKRPDEGKMKGLAFIKDPDGYWIEILAARSLAE 162
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A3D0GPF7_9GAMM (Lactoylglutathione lyase n=2 Tax=Cellvibrionales TaxID=1706369 RepID=A0A3D0GPF7_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 7.110e-10
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSFTQNVGAA 138
            GV + KRPD+G MKGLAFI DPDGY +E+L+ Q ++D  + N   A
Sbjct:  131 GVDYVKRPDDGSMKGLAFIKDPDGYWIEVLSTQGISDIISMNAATA 176
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A1H7L7C9_9BURK (Lactoylglutathione lyase n=2 Tax=Paraburkholderia caballeronis TaxID=416943 RepID=A0A1H7L7C9_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 9.670e-10
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMA 108
            G+ FRKRP EG MKGLAFILDPDGY +EIL+ + MA
Sbjct:  128 GIPFRKRPGEGKMKGLAFILDPDGYWIEILSSEGMA 163
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: UPI001D17F00B (lactoylglutathione lyase n=1 Tax=Porphyrobacter sp. GA68 TaxID=2883480 RepID=UPI001D17F00B)

HSP 1 Score: 58.9 bits (141), Expect = 1.210e-9
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMAD 111
            GV+F KRPDEG MKGLAFI DPDGY VE+L+ + MA+
Sbjct:  112 GVEFVKRPDEGRMKGLAFIADPDGYWVEVLSARRMAE 148
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A7W7F6M0_9SPHN (Lactoylglutathione lyase n=1 Tax=Sphingosinicella soli TaxID=333708 RepID=A0A7W7F6M0_9SPHN)

HSP 1 Score: 58.9 bits (141), Expect = 2.220e-9
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSFTQNVG 132
            GV+F KRP++G MKGLAFI DPDGY +EILA Q  AD      G
Sbjct:  142 GVEFVKRPNDGSMKGLAFIKDPDGYWIEILAAQTSADLTAPRAG 185
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A7Y7USJ6_9SPHN (Lactoylglutathione lyase n=4 Tax=Sphingomonas sanguinis TaxID=33051 RepID=A0A7Y7USJ6_9SPHN)

HSP 1 Score: 58.5 bits (140), Expect = 2.440e-9
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSFTQN 126
            GV F+KRP +G MK +AFI DPDGY +EIL+ Q MA+S   N
Sbjct:  128 GVPFKKRPQDGKMKDIAFITDPDGYWIEILSAQGMAESIASN 169
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A2D8S3W3_9GAMM (Lactoylglutathione lyase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2D8S3W3_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 2.480e-9
Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSF 117
            GV+F+KRPD+G MKGLAFI DPDGY +EIL+ + +A + 
Sbjct:  133 GVEFQKRPDDGNMKGLAFIKDPDGYWIEILSAKGLASTI 171
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BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Match: A0A2E9YLV3_9HYPH (Lactoylglutathione lyase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E9YLV3_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 2.480e-9
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:    1 GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSF 117
            GV+F+K+PDEG MKGLAFI DPDGY VEIL+ + +A + 
Sbjct:  133 GVEFQKKPDEGNMKGLAFIKDPDGYWVEILSARGLAKTI 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6073.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK52_ECTSI4.650e-1063.41Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
V4A5I4_LOTGI4.670e-1074.29Lactoylglutathione lyase n=1 Tax=Lottia gigantea T... [more]
I4MYU8_9PSED5.940e-1072.97Lactoylglutathione lyase n=1 Tax=Pseudomonas sp. M... [more]
A0A3D0GPF7_9GAMM7.110e-1054.35Lactoylglutathione lyase n=2 Tax=Cellvibrionales T... [more]
A0A1H7L7C9_9BURK9.670e-1072.22Lactoylglutathione lyase n=2 Tax=Paraburkholderia ... [more]
UPI001D17F00B1.210e-970.27lactoylglutathione lyase n=1 Tax=Porphyrobacter sp... [more]
A0A7W7F6M0_9SPHN2.220e-961.36Lactoylglutathione lyase n=1 Tax=Sphingosinicella ... [more]
A0A7Y7USJ6_9SPHN2.440e-959.52Lactoylglutathione lyase n=4 Tax=Sphingomonas sang... [more]
A0A2D8S3W3_9GAMM2.480e-961.54Lactoylglutathione lyase n=2 Tax=Proteobacteria Ta... [more]
A0A2E9YLV3_9HYPH2.480e-964.10Lactoylglutathione lyase n=1 Tax=Rhodobiaceae bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6073contigP-wetherbeei_contig6073:3212..3352 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LK52
Preferred nameGLO1
PFAMsGlyoxalase
Model size141
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
Exons1
Evalue7.62e-11
EggNOG OGsCOG0346@1|root,KOG2944@2759|Eukaryota
EC4.4.1.5
Descriptionlactoylglutathione lyase activity
Cds size141
COG categoryE
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.354342-CDS-P-wetherbeei_contig6073:3211..33521683186887.354342-CDS-P-wetherbeei_contig6073:3211..3352Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6073 3212..3352 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6073.3.1prot_P-wetherbeei_contig6073.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6073 3212..3352 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6073.3.1

>prot_P-wetherbeei_contig6073.3.1 ID=prot_P-wetherbeei_contig6073.3.1|Name=mRNA_P-wetherbeei_contig6073.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
GVQFRKRPDEGGMKGLAFILDPDGYSVEILAKQNMADSFTQNVGAA*
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mRNA from alignment at P-wetherbeei_contig6073:3212..3352+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6073.3.1 ID=mRNA_P-wetherbeei_contig6073.3.1|Name=mRNA_P-wetherbeei_contig6073.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig6073:3212..3352+ (Phaeothamnion wetherbeei SAG_119_79)
GGGGTTCAATTTCGGAAGCGACCGGACGAAGGCGGCATGAAGGGTCTGGC
ATTCATTCTAGATCCGGACGGTTACTCTGTCGAAATCCTCGCCAAGCAGA
ATATGGCCGATTCCTTCACACAGAACGTCGGCGCAGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6073:3212..3352+

>mRNA_P-wetherbeei_contig6073.3.1 ID=mRNA_P-wetherbeei_contig6073.3.1|Name=mRNA_P-wetherbeei_contig6073.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig6073:3212..3352+ (Phaeothamnion wetherbeei SAG_119_79)
GGGGTTCAATTTCGGAAGCGACCGGACGAAGGCGGCATGAAGGGTCTGGC
ATTCATTCTAGATCCGGACGGTTACTCTGTCGAAATCCTCGCCAAGCAGA
ATATGGCCGATTCCTTCACACAGAACGTCGGCGCAGCCTGA
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