mRNA_P-wetherbeei_contig6055.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A537RLD2_9PROT (TPP_enzyme_C domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RLD2_9PROT) HSP 1 Score: 311 bits (796), Expect = 1.050e-105 Identity = 149/193 (77.20%), Postives = 167/193 (86.53%), Query Frame = 1
Query: 16 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 594
L+RADLTKRLV KL RDEAVVAGIGNTN+DL+ AGHRPQNFYML SMGLACPIA GVALAQPERGVIALEGDGSILMALGCL TI V PRNLTI+I DNG+YQITG+Q AT DIVA+A+GAGIANS WV+DE HFEEL+ RRF+DGGP+LLAAKIDD+PG+ QT RDP +IR RFM+GLGT ++ A D
Sbjct: 9 LNRADLTKRLVTKLARDEAVVAGIGNTNFDLYAAGHRPQNFYMLGSMGLACPIAFGVALAQPERGVIALEGDGSILMALGCLATIGMVKPRNLTIVIMDNGIYQITGRQKAATASSADIVAIARGAGIANSHWVRDEKHFEELVSRRFDDGGPVLLAAKIDDKPGIAQTVRDPPLIRNRFMRGLGTGRASALD 201
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A6N7GSW5_9HYPH (TPP_enzyme_C domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSW5_9HYPH) HSP 1 Score: 306 bits (784), Expect = 9.630e-104 Identity = 145/196 (73.98%), Postives = 167/196 (85.20%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 594
+K +R +LTKRLVG+LK +EAVVAGIGNTN+DLF AGHRPQNFYML SMG+A PIA+GVA+AQPERGVIALEGDGS+LM LGCLTT+A V PRNLTII+ DNG+YQITGKQ TATGG TDIVAVA+G GIA S WV D+ HF+EL+ RRF+DGGP+LLA KIDD+PG QTPRDP++IR RFMKGLG G D
Sbjct: 15 NKIFNRTELTKRLVGQLKHEEAVVAGIGNTNFDLFAAGHRPQNFYMLGSMGIAIPIALGVAIAQPERGVIALEGDGSLLMGLGCLTTVATVRPRNLTIIVMDNGLYQITGKQTTATGGGTDIVAVARGCGIAASHWVHDDTHFDELIARRFDDGGPVLLAVKIDDKPGAAQTPRDPALIRNRFMKGLGIGSGGVLD 210
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A6L5FDZ9_9HYPH (TPP_enzyme_C domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDZ9_9HYPH) HSP 1 Score: 291 bits (746), Expect = 9.170e-98 Identity = 143/193 (74.09%), Postives = 166/193 (86.01%), Query Frame = 1
Query: 16 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 594
L+RA LT+RLV LK DEAVVAGIGNTN+DL+ AGHR QNFYML SMGLACPIA+GVALAQP+RGVIALEGDGSILMALGCLTTIANV PRNLTI+I DNG+YQITGKQ TAT G++DIVA+A+GAG+ S W+ DE HF+ L+DR FE GGP+L AA+IDD PG+ +T RDP++IRQ FMKGLGTS+ G D
Sbjct: 32 LNRAALTRRLVEILKHDEAVVAGIGNTNFDLWAAGHRKQNFYMLGSMGLACPIALGVALAQPKRGVIALEGDGSILMALGCLTTIANVRPRNLTIVIMDNGLYQITGKQTTATHGVSDIVAIARGAGLEAS-WIADETHFDVLIDRSFEHGGPVLYAARIDDEPGVGKTVRDPALIRQSFMKGLGTSRGGDLD 223
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A176YST2_9BRAD (TPP_enzyme_C domain-containing protein n=1 Tax=Bradyrhizobium neotropicale TaxID=1497615 RepID=A0A176YST2_9BRAD) HSP 1 Score: 248 bits (632), Expect = 8.360e-81 Identity = 118/188 (62.77%), Postives = 146/188 (77.66%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 570
+K ++R D+T RL+ KLK +EAV+ GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM LG L+TIA + P+NLT+I+ DNG+YQITG Q T GI D+VA+A G+G+ NS W DE FE L+D E GP L+AA+IDD+PG+ T RDP IR+RFM GLG
Sbjct: 6 TKVMNRFDVTSRLIAKLKNEEAVIGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPDRRVFALEGDGSLLMQLGTLSTIATLKPKNLTMIVMDNGIYQITGAQPTPAAGIADLVAIAAGSGLTNSSWAADEDDFERLIDEALEASGPSLIAARIDDKPGVGTTRRDPVQIRERFMHGLG 193
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A525JIU3_BRASZ (TPP_enzyme_C domain-containing protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525JIU3_BRASZ) HSP 1 Score: 247 bits (631), Expect = 1.360e-80 Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKS 582
+K ++R DLT RLV KLK +EAVV GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM +GCL+TIA +P+NLT+I+ DNGVYQITG Q T + DIVA+A+G+G+ANS W DE FE L+D+ P L+A +IDD+PG QT RDP IR+RFM GLG ++
Sbjct: 10 TKVMNRFDLTSRLVAKLKHEEAVVGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPKRRVFALEGDGSLLMQMGCLSTIATQAPKNLTMIVMDNGVYQITGAQPTPAAAVADIVAIAQGSGLANSAWAADEEDFERLVDQSLTSTVPTLIAVRIDDKPGTGQTRRDPVQIRERFMLGLGVRQA 201
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A1H1KEM1_9HYPH (Thiamine pyrophosphate enzyme, C-terminal TPP binding domain n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1KEM1_9HYPH) HSP 1 Score: 247 bits (631), Expect = 1.400e-80 Identity = 118/185 (63.78%), Postives = 146/185 (78.92%), Query Frame = 1
Query: 16 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 570
++R DLT+RLV +L+ DEAV+ GIGNTN+DL+ +G RPQNFYML SMGLACPIA+GVALAQP R V+ALEGDGS+LM LG LTTIA++ P+NL II+ DNG YQITG Q T T + DIVA+AKGAGIA + W DE FE L+ R + GP L+AA+IDD+P + T RDP++IR RFM+GLG
Sbjct: 17 MNRFDLTQRLVARLEHDEAVIGGIGNTNFDLWASGQRPQNFYMLGSMGLACPIALGVALAQPGRRVLALEGDGSLLMQLGSLTTIASLRPKNLVIIVMDNGCYQITGGQKTTTSTVADIVAIAKGAGIAQASWAADEHMFESLVARSLSEDGPSLIAARIDDKPAVATTERDPALIRDRFMRGLG 201
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: UPI0004985AD5 (thiamine pyrophosphate-dependent enzyme n=1 Tax=Bradyrhizobium sp. URHD0069 TaxID=1380355 RepID=UPI0004985AD5) HSP 1 Score: 247 bits (631), Expect = 1.450e-80 Identity = 118/192 (61.46%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKS 582
+K ++R DLT RLV KLK +EAV+ GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM LGCL+TIA ++P+NLT+I+ DNGVYQITG Q T ++DIVA+A G G+ANS W DE FE L+++ GP L+A +ID++PG+ T RDP IR+RFM GLG ++
Sbjct: 12 TKVMNRFDLTSRLVAKLKNEEAVIGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPQRRVFALEGDGSLLMQLGCLSTIATLAPKNLTMIVMDNGVYQITGAQPTPAAEVSDIVAIATGCGLANSAWAADEEDFERLVEQSLSGSGPTLIAVRIDEKPGVGATRRDPVQIRERFMLGLGVRQA 203
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A1M5N001_9BRAD (Thiamine pyrophosphate enzyme, C-terminal TPP binding domain n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5N001_9BRAD) HSP 1 Score: 246 bits (629), Expect = 2.920e-80 Identity = 118/188 (62.77%), Postives = 144/188 (76.60%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 570
+K ++R DLT RLV KLK DEAVV GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM +GCL+TIA + P+NLT+++ DNGVYQITG Q T ++DIVA+A G G++NS W DE FE L+D GP L+ +IDD+PG+ T RDP IR+RFM GLG
Sbjct: 12 TKVMNRFDLTSRLVAKLKNDEAVVGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPKRRVFALEGDGSLLMQMGCLSTIATLKPKNLTMVVMDNGVYQITGAQPTPAAAVSDIVAIAAGCGLSNSAWAADEEDFERLVDLSLSASGPTLIGVRIDDKPGVGTTRRDPVQIRERFMVGLG 199
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: M4Z6H1_9BRAD (Putative Sulfopyruvate decarboxylase beta subunit n=2 Tax=Bradyrhizobium TaxID=374 RepID=M4Z6H1_9BRAD) HSP 1 Score: 245 bits (625), Expect = 1.000e-79 Identity = 120/185 (64.86%), Postives = 143/185 (77.30%), Query Frame = 1
Query: 16 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 570
++R DLT RLV KL +EAV+ GIGNTN+DL+ AG RPQNFYML SMGLACPIA+GVALAQP+R V ALEGDGS+LM LGCLTTIA ++P+NL II+ DNG+YQITG Q T DIVA+A G GIA S W DE FE L+D E GP L+AA+IDD+PG+ T RDP+ IR+RFM+GLG
Sbjct: 11 MNRTDLTCRLVAKLTHEEAVIGGIGNTNFDLWAAGQRPQNFYMLGSMGLACPIALGVALAQPQRRVFALEGDGSLLMQLGCLTTIATLAPKNLAIIVMDNGIYQITGNQPTPARN-ADIVAIAAGCGIAASHWAADEEDFERLVDAVLETAGPTLIAARIDDKPGVGATRRDPAQIRERFMQGLG 194
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A4YXL0_BRASO (Putative Sulfopyruvate decarboxylase (Beta subunit) n=4 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A4YXL0_BRASO) HSP 1 Score: 243 bits (620), Expect = 5.770e-79 Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 1
Query: 7 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 570
+K ++R DLT RLV KL R+EAV+ GIGNTN+DL+ AG RPQNFYML SMGLACPIA+GVALAQP+R V ALEGDGS+LM LGCLTTIA+++ NLTII+ DNG+YQITG Q T DIVA+A G GI +S W DEA FE L+D E GP+L+A KIDD+PG+ T RDP+ IR+RFM+GLG
Sbjct: 8 TKIMNRHDLTCRLVAKLTREEAVIGGIGNTNFDLWAAGPRPQNFYMLGSMGLACPIALGVALAQPQRRVFALEGDGSLLMQLGCLTTIASLALSNLTIIVMDNGIYQITGSQPTPAKQ-ADIVAIAAGCGIVSSHWAADEADFERLVDAALELPGPMLIAVKIDDKPGVGATHRDPAQIRERFMQGLG 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6055.4.1 >prot_P-wetherbeei_contig6055.4.1 ID=prot_P-wetherbeei_contig6055.4.1|Name=mRNA_P-wetherbeei_contig6055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp MPSKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLAback to top mRNA from alignment at P-wetherbeei_contig6055:2681..3280+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6055.4.1 ID=mRNA_P-wetherbeei_contig6055.4.1|Name=mRNA_P-wetherbeei_contig6055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig6055:2681..3280+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6055:2681..3280+ >mRNA_P-wetherbeei_contig6055.4.1 ID=mRNA_P-wetherbeei_contig6055.4.1|Name=mRNA_P-wetherbeei_contig6055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig6055:2681..3280+ (Phaeothamnion wetherbeei SAG_119_79)back to top |