mRNA_P-wetherbeei_contig6055.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6055.2.1
Unique NamemRNA_P-wetherbeei_contig6055.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: A0A127EPU9_9HYPH (Extra-cytoplasmic solute receptor family protein n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EPU9_9HYPH)

HSP 1 Score: 525 bits (1351), Expect = 3.360e-185
Identity = 273/359 (76.04%), Postives = 304/359 (84.68%), Query Frame = 1
Query:    1 MRDSNRGTRAEDPGAEDAGDVGNGLTEEFMPIIARRAFVAGTAATLLAGTRPASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIG----GHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            MRDS   T A+ P      + G     E M  I RRAFVAG+AA L +G R   A+ YPSRPVT I+PFPPGGSTTIV+RSVSD+LGE LGQQ++IDNRGGAGGTVGT+ALA+S+PDGYTIGLGY+GTLAIGPNLYSN GYDPRKDFAAIGRIATAPNTLVVHPSF AK V ELIAYAKANP KV++GSAG+GTVSH+CGEYFA+A GIKLVH+PYKGTGPALSDLIG    GHIP+AFAPIPATY N+K GNMRMLAVTS  RSTLAPE+PTIAEQGVPGFEAVLRY +VAPAGTP P++ RLNKALN ALA+DE+RKRLALEGAEP PSTP +YA D+D+E   W KVVKESGAKAD
Sbjct:    1 MRDSKPSTGAKTPAPRS--ETGKA---ETMKSIRRRAFVAGSAALLASGGR-THAEDYPSRPVTFIVPFPPGGSTTIVVRSVSDRLGELLGQQVIIDNRGGAGGTVGTKALARSEPDGYTIGLGYSGTLAIGPNLYSNPGYDPRKDFAAIGRIATAPNTLVVHPSFQAKNVAELIAYAKANPGKVNYGSAGVGTVSHICGEYFANAAGIKLVHVPYKGTGPALSDLIGDLIGGHIPMAFAPIPATYSNSKEGNMRMLAVTSAKRSTLAPEIPTIAEQGVPGFEAVLRYGIVAPAGTPAPIVARLNKALNEALASDEIRKRLALEGAEPLPSTPAEYAADIDREEREWGKVVKESGAKAD 353          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: UPI0004966A21 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. URHD0069 TaxID=1380355 RepID=UPI0004966A21)

HSP 1 Score: 424 bits (1091), Expect = 4.440e-146
Identity = 208/303 (68.65%), Postives = 252/303 (83.17%), Query Frame = 1
Query:  157 ASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            A AQS+P+R +TL+IPF PGGST+IV R ++DK+ E LG+++V+DNR GAGGTVGT+A+A SDPDGYTI LGYTGTLAIGP+LY N GYDPRKDFA IG I  APN+LVVHPSFPAKT+ ELIAYAKANP KV+FGSAG GTVSH+ GEYFA++ GIKLVHIPYKGTGPAL+DL+GGHIP+AFAPIPA++ N   G +R LAVTS TRS+L P+VPTIAE  +PGF+A L Y LVAPAGTPRPVI++LNK L AALA+DE +K+L L+G E  P TPE YA  +DK+   W+++VK SG + +
Sbjct:   24 AQAQSFPNRAITLVIPFAPGGSTSIVGRVIADKMSELLGEKVVVDNRPGAGGTVGTKAVANSDPDGYTIALGYTGTLAIGPSLYKNAGYDPRKDFAPIGLIGNAPNSLVVHPSFPAKTIGELIAYAKANPGKVNFGSAGAGTVSHITGEYFAASAGIKLVHIPYKGTGPALTDLLGGHIPMAFAPIPASHPNVSAGRLRALAVTSTTRSSLLPDVPTIAESVLPGFDASLYYGLVAPAGTPRPVIDKLNKTLQAALASDEAKKQLGLDGTEITPGTPEDYAAFIDKDEKKWSQLVKSSGVEQE 326          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: W3RNK7_9BRAD (MFS transporter n=2 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RNK7_9BRAD)

HSP 1 Score: 426 bits (1095), Expect = 8.290e-146
Identity = 208/304 (68.42%), Postives = 249/304 (81.91%), Query Frame = 1
Query:  154 PASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            PA AQSYP RP+T+++ F PGGST+IV R+V+D++ E LGQ+++IDNR GAGGT+GT+A+A S PDGYTI LGYTGTLAIGP LYS+ GYDPRKDFA IG I  APN+LVVHPSFPAKTV ELIAYAKANP KV+FGSAG+GT SHV GEYFA+A GIKL+HIPYKGTGPAL+DLIGGHIP+AFAPIPAT+ N   G +R LAVTS TR  L P+VPTI+E G+ GF+A L Y LVAPAGTPRP+I++LN AL  AL +D+V+KRL  +G    PSTPE+YA  +D +   W+K+VK SGAK D
Sbjct:   81 PARAQSYPDRPITMVVAFAPGGSTSIVARAVADRMSETLGQKVIIDNRPGAGGTIGTKAVAGSAPDGYTIALGYTGTLAIGPTLYSHAGYDPRKDFAPIGLIGNAPNSLVVHPSFPAKTVAELIAYAKANPGKVNFGSAGVGTASHVSGEYFANAAGIKLIHIPYKGTGPALTDLIGGHIPMAFAPIPATHSNISGGTLRALAVTSTTRIALLPDVPTISEAGLTGFDASLYYGLVAPAGTPRPIIDKLNAALREALDSDDVKKRLVADGTNVTPSTPEEYAAFIDTDEAKWSKIVKASGAKGD 384          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: UPI001BD0F6B9 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. dw_411 TaxID=2720082 RepID=UPI001BD0F6B9)

HSP 1 Score: 424 bits (1089), Expect = 8.940e-146
Identity = 210/307 (68.40%), Postives = 249/307 (81.11%), Query Frame = 1
Query:  145 GTRPASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            G   A AQSYP RP+TL+IPF PGGST+IV R ++DK+   LGQ I++DNR GAGGT GT+ +AKSDPDGYTI LGYTGTLAIGP+LY NVGYDPR+DFA IG I  APN+LVVHPSFP  T+ EL+A+AK +P KV+FGSAG GTVSH+ GEYFA A GIKL HIPYKGTGPAL+DL+GGHIP+AFAPIPA + N   G +R LAVTS TRS+L PEVPT++E GVPGF+A L Y LVAPAGTPRPVIERLNK L AALA+DEV+K+L L+G E  P TPE+YAD +DK+   WA++VK SG + +
Sbjct:   20 GLASAQAQSYPDRPITLVIPFAPGGSTSIVGRVIADKMSRLLGQGIIVDNRAGAGGTFGTKLVAKSDPDGYTILLGYTGTLAIGPSLYKNVGYDPRRDFAPIGMIGNAPNSLVVHPSFPVATIAELVAFAKEHPGKVNFGSAGAGTVSHITGEYFARAAGIKLQHIPYKGTGPALTDLLGGHIPMAFAPIPAAHANVSAGLLRALAVTSSTRSSLLPEVPTMSEAGVPGFDASLYYGLVAPAGTPRPVIERLNKELQAALASDEVKKQLGLDGTEITPGTPEEYADFIDKDERKWAELVKASGVEQE 326          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: A0A5A7WFJ5_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=4 Tax=Tardiphaga TaxID=1395974 RepID=A0A5A7WFJ5_9BRAD)

HSP 1 Score: 424 bits (1091), Expect = 8.970e-146
Identity = 209/301 (69.44%), Postives = 248/301 (82.39%), Query Frame = 1
Query:  163 AQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            AQ+YP RP+TLIIPF PGGST+IV R ++DK+ E LG++I++DNR GAGGTVGTRA+AKS PDGYTIGLGYTGTLAIGP LY+  GYDPRKDFA IG I  +PN+LVVHPSFPAKTV ELIAYAKANP K++FGSAG GT SH+ GEYF  A GI LVH+PYKGTGPAL DLIGGHIP+AFAPIPAT+ N     +R LAVTSLTR++L P+VPTIAE G+ GF+A L Y L+APAGTPR +I+RLN+ L AALA+DEVRKRL  +G EP P TPE YA  +D++ T W+++VK SGAK +
Sbjct:   46 AQNYPERPLTLIIPFAPGGSTSIVGRVIADKMSETLGEKIIVDNRAGAGGTVGTRAVAKSAPDGYTIGLGYTGTLAIGPTLYTKAGYDPRKDFAPIGMIGNSPNSLVVHPSFPAKTVAELIAYAKANPGKLNFGSAGAGTASHITGEYFGHAAGITLVHVPYKGTGPALVDLIGGHIPMAFAPIPATHANIAGRQLRGLAVTSLTRTSLLPDVPTIAESGLQGFDASLYYGLIAPAGTPRSIIDRLNRELRAALASDEVRKRLQQDGTEPTPGTPEDYAVFIDQDETKWSRIVKTSGAKEE 346          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: A0A7S7TJ93_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=9 Tax=Bradyrhizobium TaxID=374 RepID=A0A7S7TJ93_9BRAD)

HSP 1 Score: 424 bits (1089), Expect = 1.030e-145
Identity = 212/323 (65.63%), Postives = 259/323 (80.19%), Query Frame = 1
Query:   97 IARRAFVAGTAATLLAGTRPASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            I ++  VA  A    A +  A AQ+YP RP+TL+IPF PGGST+IV R V++K+GE LG+++V+DNR GAGGTVGT+A+AKSDPDGYT+ LGYTGTLAIGP+LY N GYDPRKDFA IG I  APN+LVVHPSFPAK+V ELI YAKANP KV+FGSAG GT SH+ GEYFA A GI LVHIPYKGTGPAL+DL+GGHIP+AFAPIPA++ N   G +R LAVTS  RS L P+VPTIAE G+PGF+A L Y LVAPAGTPRPVI++LNKAL+AAL ++EV+++L  +G +  P TPE YAD +DK+   WA++VK SG + +
Sbjct:    8 IMKKLIVAVAALAFTALSHAAQAQNYPVRPITLVIPFAPGGSTSIVGRGVAEKMGELLGEKVVVDNRPGAGGTVGTKAVAKSDPDGYTLLLGYTGTLAIGPSLYKNAGYDPRKDFAPIGMIGNAPNSLVVHPSFPAKSVAELITYAKANPGKVNFGSAGAGTASHITGEYFARAAGITLVHIPYKGTGPALTDLLGGHIPMAFAPIPASHTNVAAGKLRALAVTSSARSGLLPDVPTIAEAGLPGFDASLYYGLVAPAGTPRPVIDKLNKALHAALTSEEVKRQLGNDGTDITPGTPEDYADFIDKDEKKWAQLVKASGVEQE 330          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: UPI001C02033B (tripartite tricarboxylate transporter substrate binding protein n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C02033B)

HSP 1 Score: 423 bits (1087), Expect = 1.740e-145
Identity = 209/299 (69.90%), Postives = 251/299 (83.95%), Query Frame = 1
Query:  157 ASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESG 1053
            A AQ++P+R +TL+IPF PGGST+IV R ++DK+ E LG+++V+DNR GAGGTVGT+A+AKSDPDGYTI LGYTGTLAIGP+LY N GYDPRKDFA IG I  APN+LVVHPSFPAK+V ELIAYAKANP KV+FGSAG GTVSH+ GEYFA++ GIKL+HIPYKGTGPAL+DL+GGHIP+AFAPIPA++ N   G +R LAVTS TRS+L PEVPTIAE G+PGF+A L Y LVAPAGTPRPVI++LN AL AALA+ +V+K+L L+G E  P TPE YA  +DK+   WA +VK SG
Sbjct:   23 AHAQTFPNRVITLVIPFAPGGSTSIVGRVIADKMSEILGEKVVVDNRPGAGGTVGTKAVAKSDPDGYTIALGYTGTLAIGPSLYKNAGYDPRKDFAPIGLIGNAPNSLVVHPSFPAKSVAELIAYAKANPGKVNFGSAGAGTVSHITGEYFAASAGIKLIHIPYKGTGPALTDLLGGHIPMAFAPIPASHANISAGKLRALAVTSATRSSLLPEVPTIAESGLPGFDASLYYGLVAPAGTPRPVIDKLNAALQAALASADVKKQLGLDGTEITPGTPEDYAAFIDKDEKKWAGLVKASG 321          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: UPI001BA74B21 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BA74B21)

HSP 1 Score: 421 bits (1081), Expect = 1.320e-144
Identity = 210/313 (67.09%), Postives = 256/313 (81.79%), Query Frame = 1
Query:  127 AATLLAGTRPASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            AA L+     A AQ+YPSRP+TL+IPF PGGST++V R V+DK+GE LG+++V+DNR GAGGTVGT+A+AKS+PDGYT+ LGYTGTLAIGP+LY N GYDPRKDFA IG I  APN+LVVHPSFPAKTV ELIAYAKANP KV+FGSAG GT SH+ GEYFASA GIKLVHIPYKGTGPAL+DL+GGHIP+AFAP+PA++     G +R LAVTS +RS L P+VPTIAE G+ GF+A L Y LVAPAGTP+P+I++LNKAL  ALA+DEV+K+L  +G +  P TPE YA  +D++   WA +VK SGA+ +
Sbjct:   11 AAALVLTASFAHAQNYPSRPITLVIPFAPGGSTSVVGRGVADKMGELLGEKLVVDNRPGAGGTVGTKAVAKSEPDGYTLLLGYTGTLAIGPSLYKNPGYDPRKDFAPIGMIGNAPNSLVVHPSFPAKTVAELIAYAKANPGKVNFGSAGAGTASHITGEYFASAAGIKLVHIPYKGTGPALTDLLGGHIPMAFAPVPASHAQVTGGKLRALAVTSSSRSGLMPDVPTIAESGLAGFDASLYYGLVAPAGTPKPIIDKLNKALRDALASDEVKKQLGNDGTDITPGTPEDYAVLIDRDEKKWAGLVKASGAEQE 323          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: A0A525IEX6_BRASZ (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525IEX6_BRASZ)

HSP 1 Score: 419 bits (1076), Expect = 8.450e-144
Identity = 206/303 (67.99%), Postives = 249/303 (82.18%), Query Frame = 1
Query:  157 ASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            A  QSYP+R +T++IPFPPGGST++V R ++D++ + LGQ IVIDNR GAGGTVG RA+AKSDPDGYT+ +GYTGTLAIGP+LY N GYDPRKDFA IG I  AP +LVVHPSFPA+TV ELIAYAKA+P KV+FGSAG GTVSH+ GEYFA + GI L+HIPYKGTGPALSDL+GGHIP+AFAPIP T+ N   G +R LAVT  TRS+L P+VPT+ E G+PGF+A L Y LVAPAGTPRPVI+RLN AL AALATDEV+K+LAL+G E  P TPE YAD +D++   W+++VK SG + +
Sbjct:   24 ARGQSYPNRTITMVIPFPPGGSTSLVGRVIADRMSQLLGQSIVIDNRAGAGGTVGARAVAKSDPDGYTLLVGYTGTLAIGPSLYKNPGYDPRKDFAPIGMIGNAPTSLVVHPSFPARTVAELIAYAKAHPGKVNFGSAGAGTVSHITGEYFARSAGITLMHIPYKGTGPALSDLLGGHIPMAFAPIPTTHANVSAGLLRALAVTGTTRSSLLPDVPTMPEAGLPGFDASLYYGLVAPAGTPRPVIDRLNGALRAALATDEVKKQLALDGTEITPGTPEDYADFIDRDERKWSELVKASGVEQE 326          
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Match: A0A257KKY9_9BRAD (Uncharacterized protein n=3 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A257KKY9_9BRAD)

HSP 1 Score: 418 bits (1074), Expect = 2.590e-143
Identity = 203/303 (67.00%), Postives = 247/303 (81.52%), Query Frame = 1
Query:  157 ASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRGGAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAIGRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCGEYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNMRMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERLNKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKESGAKAD 1065
            A+AQ +P  P+TLIIPF PGGST+IV R+++DK+ E LG+++++DNR GAGGTVGTRA+AKS PDGYTIGLGYTGTLAIGP LY+  GYDPRKDFA IG I  +PN+LVVHPSFPAKTV ELIAYAKAN  KV+FGSAG GT SH+ GEYFA A GI LVH+PYKGTGPAL DLIGGHIPVAFAP+PAT+ N   G +R +AVTSLTR +L P+VPT++E G+ GF+A L Y L+APAGTPRP++ERLN  L  AL +++VRKRL  +G E AP +PE YA  +D++ T WA++VK +GAK D
Sbjct:   36 ANAQKFPDHPITLIIPFAPGGSTSIVGRAIADKMSETLGEKVIVDNRPGAGGTVGTRAVAKSAPDGYTIGLGYTGTLAIGPTLYAKAGYDPRKDFAPIGMIGQSPNSLVVHPSFPAKTVSELIAYAKANAGKVNFGSAGAGTASHITGEYFAKAAGITLVHVPYKGTGPALVDLIGGHIPVAFAPVPATHANIVGGQLRGIAVTSLTRVSLLPDVPTVSESGLQGFDASLTYGLIAPAGTPRPIVERLNAELRKALESEDVRKRLQQDGTELAPGSPEDYATFIDRDETKWAQIVKSTGAKED 338          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6055.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EPU9_9HYPH3.360e-18576.04Extra-cytoplasmic solute receptor family protein n... [more]
UPI0004966A214.440e-14668.65tripartite tricarboxylate transporter substrate bi... [more]
W3RNK7_9BRAD8.290e-14668.42MFS transporter n=2 Tax=Afipia sp. P52-10 TaxID=14... [more]
UPI001BD0F6B98.940e-14668.40tripartite tricarboxylate transporter substrate bi... [more]
A0A5A7WFJ5_9BRAD8.970e-14669.44Tripartite tricarboxylate transporter substrate bi... [more]
A0A7S7TJ93_9BRAD1.030e-14565.63Tripartite tricarboxylate transporter substrate bi... [more]
UPI001C02033B1.740e-14569.90tripartite tricarboxylate transporter substrate bi... [more]
UPI001BA74B211.320e-14467.09tripartite tricarboxylate transporter substrate bi... [more]
A0A525IEX6_BRASZ8.450e-14467.99Tripartite tricarboxylate transporter substrate bi... [more]
A0A257KKY9_9BRAD2.590e-14367.00Uncharacterized protein n=3 Tax=Bradyrhizobiaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6055contigP-wetherbeei_contig6055:1034..2101 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1429916.X566_12240
PFAMsTctC
Model size1068
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.36e-146
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JVJ7@41294|Bradyrhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size1068
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186885.9184263-CDS-P-wetherbeei_contig6055:1033..21011683186885.9184263-CDS-P-wetherbeei_contig6055:1033..2101Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6055 1034..2101 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6055.2.1prot_P-wetherbeei_contig6055.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6055 1034..2101 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6055.2.1

>prot_P-wetherbeei_contig6055.2.1 ID=prot_P-wetherbeei_contig6055.2.1|Name=mRNA_P-wetherbeei_contig6055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=356bp
MRDSNRGTRAEDPGAEDAGDVGNGLTEEFMPIIARRAFVAGTAATLLAGT
RPASAQSYPSRPVTLIIPFPPGGSTTIVIRSVSDKLGEALGQQIVIDNRG
GAGGTVGTRALAKSDPDGYTIGLGYTGTLAIGPNLYSNVGYDPRKDFAAI
GRIATAPNTLVVHPSFPAKTVPELIAYAKANPSKVSFGSAGIGTVSHVCG
EYFASATGIKLVHIPYKGTGPALSDLIGGHIPVAFAPIPATYENAKNGNM
RMLAVTSLTRSTLAPEVPTIAEQGVPGFEAVLRYALVAPAGTPRPVIERL
NKALNAALATDEVRKRLALEGAEPAPSTPEQYADDLDKEVTLWAKVVKES
GAKAD*
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mRNA from alignment at P-wetherbeei_contig6055:1034..2101-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6055.2.1 ID=mRNA_P-wetherbeei_contig6055.2.1|Name=mRNA_P-wetherbeei_contig6055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1068bp|location=Sequence derived from alignment at P-wetherbeei_contig6055:1034..2101- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGACAGTAACAGGGGGACCAGGGCGGAAGATCCTGGAGCGGAAGA TGCTGGCGACGTTGGAAATGGCTTGACGGAGGAATTCATGCCGATCATCG CAAGACGCGCTTTCGTGGCCGGCACGGCGGCAACCCTGCTCGCCGGGACC CGACCGGCATCCGCCCAGAGCTATCCGAGCCGGCCGGTCACGCTGATCAT CCCGTTCCCGCCCGGCGGCAGCACCACCATCGTCATCCGATCGGTGAGCG ACAAGCTCGGCGAGGCGCTCGGCCAGCAGATCGTCATCGACAACCGCGGC GGCGCGGGCGGCACTGTCGGCACGCGCGCGCTCGCGAAATCCGATCCCGA CGGCTACACCATCGGCCTGGGCTACACGGGCACACTGGCGATCGGCCCTA ACCTTTATTCCAACGTCGGCTACGATCCCCGCAAGGATTTCGCCGCGATC GGGCGGATCGCCACGGCACCGAACACCCTGGTCGTGCATCCCAGCTTCCC GGCGAAGACCGTCCCGGAGCTCATCGCCTATGCAAAAGCCAATCCCAGCA AGGTCAGCTTCGGCTCCGCCGGCATCGGCACCGTCAGCCACGTCTGCGGC GAATATTTCGCAAGTGCGACCGGCATCAAGCTCGTGCATATCCCCTACAA GGGCACTGGGCCGGCGCTGAGCGATCTGATTGGCGGTCATATCCCGGTGG CTTTCGCTCCGATACCGGCCACTTACGAGAATGCCAAGAACGGCAACATG CGCATGCTCGCGGTGACGAGCCTGACGCGCTCGACACTGGCGCCCGAGGT GCCGACCATCGCCGAACAGGGCGTGCCGGGGTTCGAGGCGGTGCTTCGCT ACGCCCTGGTGGCACCGGCCGGTACCCCGCGTCCCGTCATCGAACGGCTC AACAAGGCGCTCAACGCAGCGCTCGCGACCGACGAAGTGCGCAAGCGGCT TGCGCTCGAAGGCGCCGAACCGGCACCGAGCACCCCGGAGCAATACGCGG ACGATCTCGACAAAGAGGTCACGCTGTGGGCCAAGGTGGTGAAGGAATCC GGCGCCAAGGCGGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6055:1034..2101-

>mRNA_P-wetherbeei_contig6055.2.1 ID=mRNA_P-wetherbeei_contig6055.2.1|Name=mRNA_P-wetherbeei_contig6055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1068bp|location=Sequence derived from alignment at P-wetherbeei_contig6055:1034..2101- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGACAGTAACAGGGGGACCAGGGCGGAAGATCCTGGAGCGGAAGA
TGCTGGCGACGTTGGAAATGGCTTGACGGAGGAATTCATGCCGATCATCG
CAAGACGCGCTTTCGTGGCCGGCACGGCGGCAACCCTGCTCGCCGGGACC
CGACCGGCATCCGCCCAGAGCTATCCGAGCCGGCCGGTCACGCTGATCAT
CCCGTTCCCGCCCGGCGGCAGCACCACCATCGTCATCCGATCGGTGAGCG
ACAAGCTCGGCGAGGCGCTCGGCCAGCAGATCGTCATCGACAACCGCGGC
GGCGCGGGCGGCACTGTCGGCACGCGCGCGCTCGCGAAATCCGATCCCGA
CGGCTACACCATCGGCCTGGGCTACACGGGCACACTGGCGATCGGCCCTA
ACCTTTATTCCAACGTCGGCTACGATCCCCGCAAGGATTTCGCCGCGATC
GGGCGGATCGCCACGGCACCGAACACCCTGGTCGTGCATCCCAGCTTCCC
GGCGAAGACCGTCCCGGAGCTCATCGCCTATGCAAAAGCCAATCCCAGCA
AGGTCAGCTTCGGCTCCGCCGGCATCGGCACCGTCAGCCACGTCTGCGGC
GAATATTTCGCAAGTGCGACCGGCATCAAGCTCGTGCATATCCCCTACAA
GGGCACTGGGCCGGCGCTGAGCGATCTGATTGGCGGTCATATCCCGGTGG
CTTTCGCTCCGATACCGGCCACTTACGAGAATGCCAAGAACGGCAACATG
CGCATGCTCGCGGTGACGAGCCTGACGCGCTCGACACTGGCGCCCGAGGT
GCCGACCATCGCCGAACAGGGCGTGCCGGGGTTCGAGGCGGTGCTTCGCT
ACGCCCTGGTGGCACCGGCCGGTACCCCGCGTCCCGTCATCGAACGGCTC
AACAAGGCGCTCAACGCAGCGCTCGCGACCGACGAAGTGCGCAAGCGGCT
TGCGCTCGAAGGCGCCGAACCGGCACCGAGCACCCCGGAGCAATACGCGG
ACGATCTCGACAAAGAGGTCACGCTGTGGGCCAAGGTGGTGAAGGAATCC
GGCGCCAAGGCGGACTGA
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