mRNA_P-wetherbeei_contig6052.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 134 bits (337), Expect = 5.670e-34 Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 1 NAARLVAALRALRMDMGLVADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSPDFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
NA++L+ A+ L++D GL +D+L S RD VLL LHLFQ LPQ+VPR EVEF A LG + K +EL+NP ++ ++Y+VT+ GS DFR V L PG A+F VEL+PRF+ PV RLTFWA R
Sbjct: 1994 NASKLLTAMGKLKVDYGLGVEDILDLSDRDGVLLALHLFQSLPQLVPRTEVEFRANLGSVVSKSIELKNPSSKSIKYDVTLEGSTDFRANGKEVHLEPGKEAEFTVELLPRFSSPVEARLTFWAAR 2119
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.450e-25 Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 25 LRALRMDMGLVADDVL---KPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTV--AGSPDFRLPETRVTLPPGGAADFVVELM-PRFTRPVTGRLTFWATR 378
LRALR DMG+ +DV + GRD +LL+LHLF LPQ+VP+ +EF A LG +RK +E+RNP R ++Y VT+ AGS DFR R+ + GG A+ V+L+ RF PV RLT WA R
Sbjct: 1286 LRALRCDMGVTVEDVTYGGRGGGRDALLLLLHLFAALPQLVPKTVIEFRAALGGSARKSIEIRNPSERDIQYEVTLEGAGSGDFRAHAARLLIEAGGTAEIAVDLVRARFAAPVEARLTCWALR 1409
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A7S3UN52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UN52_HETAK) HSP 1 Score: 91.3 bits (225), Expect = 1.610e-21 Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 58 ADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRP-VEYNVTVAGSPDFRLPETRVTLPPGGAADFVVELMPRFTRP 345
AD + + GR +LLVLHL+ +LPQ+VP+ +EF +TLG+ S K +ELRNP R +EY V + G+ F + + RV +PPG A F V+++P+F+ P
Sbjct: 1 ADGLAEMDGRCYLLLVLHLYLNLPQLVPKTTIEFPSTLGVESYKSIELRNPNRRAAIEYEVQLEGATSFSVQDQRVAIPPGAVAQFPVKVLPKFSHP 97
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A7S3H9K5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9K5_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.200e-20 Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 22 ALRALRMDMGLVADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSPDFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
A++ LRM++ +D+ S R ++L+VLH++ +LP +VP+ +VEF LG K +EL+NP R +EY+VT+AG+ DF T + + P +A F+V L +F P +LTFWA +
Sbjct: 72 AMQELRMELSTTYEDITF-STRSILLMVLHMYLNLPNLVPKTKVEFVGDLGTPIMKEIELKNPSRRTIEYSVTLAGNNDFTAQSTSLVIAPESSAVFLVTLNAKFVDPAYAKLTFWAQK 189
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A1V9ZG56_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG56_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.040e-19 Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 1 NAARLVAALRALRMDMGLVADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSP-DFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
NAA L AL L +D GLV + + S VLLVLHL+Q++PQ +P+ +EF LG K +EL+NP + + Y+V + G +F + +TL P +A FVVEL P+FTR V+ RLTF + R
Sbjct: 1693 NAAALRNALSQLGLDYGLVPELLCSLSFPSTVLLVLHLYQNVPQFLPKTTIEFRGVLGQTITKSIELKNPSKKTIVYDVFLEGQVREFSIHAHTLTLEPEKSATFVVELKPKFTRTVSARLTFRSVR 1819
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A662XAQ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAQ9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.260e-18 Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 25 LRALRMDMGLVADDVLKP-SGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSP-------------DFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
L A +D GL A L+ SGR+M++L+LHL Q LPQ +P+A +EF LG L K +EL+NP RP+ Y+V + G+ +F + + L PG FVV PRF+R VT RL F A R
Sbjct: 390 LGAFGVDFGLDATRFLRRFSGREMLVLLLHLQQTLPQFIPKATIEFRGGLGQLMEKSIELKNPSARPLRYHVFLDGAEGSTAVGDAANAASEFTIEANELVLEPGKTVAFVVTFRPRFSRKVTARLVFQAVR 521
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A7S1CHU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHU4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.570e-18 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 79 SGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSPDFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
+ RD +L L+L+Q+LPQ++P+ +++F + LG K +ELRNP RP+ Y VT+ G+P+FR+ ++ + P G F +E RF+ P +L F + R
Sbjct: 20 NNRDALLAALYLYQNLPQLIPKTQIDFESALGHTVVKTIELRNPTKRPISYMVTLEGAPEFRISSNQLRIDPDGMVAFPIECKSRFSAPCEAQLAFRSKR 119
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A1V9ZZW5_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZW5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.340e-18 Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 1 NAARLVAALRALRMDMGLVADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSP-DFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
NA+ L AL L +D GL + ++ S +LL+LHL+Q++PQ +P+ +EF LG +K +EL+NP + + Y+V + G +F + T +TL P +A F+V+ P+FTR V RLTF + R
Sbjct: 1690 NASALRNALSLLGLDYGLAPELLISLSFPSTILLILHLYQNVPQFIPKTTIEFKGILGQTIQKSIELKNPSKKTIVYDVFLEGQVREFTIYATTLTLEPEKSAGFLVDFKPKFTRTVQARLTFRSVR 1816
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: A0A662Y0T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0T1_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.560e-18 Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 25 LRALRMDMGLVADDVLKP-SGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNVTVAGSP-------------DFRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
L A +D GL A L+ SGR+M++L+LHL Q LPQ +P+A +EF LG L K +EL+NP RP+ Y+V + G+ +F + + L PG F V PRF+R VT RL F A R
Sbjct: 2290 LGAFGVDFGLDATRFLRRFSGREMLVLLLHLQQTLPQFIPKATIEFRGGLGQLMEKSIELKNPSARPLRYHVFLDGAEGSTAVGDAANAASEFTIEANELVLEPGKTVAFAVTFRPRFSRKVTARLVFQAVR 2421
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Match: D0NT43_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NT43_PHYIT) HSP 1 Score: 89.0 bits (219), Expect = 4.570e-18 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 NAARLVAALRALRMDMGLVADDVLKP-SGRDMVLLVLHLFQDLPQMVPRAEVEFCATLGLLSRKCVELRNPGTRPVEYNV------------TVAGSPD-----FRLPETRVTLPPGGAADFVVELMPRFTRPVTGRLTFWATR 378
AA L+ L A +D G+ + L+ +GR+M+LL+LHL Q LPQ +P+A +EF LG + K +EL+NP T+P+ Y+V T AG P+ F + + L PG F V PRF+R +T RL F A R
Sbjct: 1876 QAAVLLQTLGAFGLDFGMDSTRFLRGFTGREMLLLLLHLQQTLPQFIPKATIEFKGGLGQVMEKSIELKNPSTKPLRYHVFLDKGDRNSAIGTGAGGPEAAASEFAIEANEIVLDPGKTVAFAVTFRPRFSRKLTARLVFQAAR 2019 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6052.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6052.1.1 >prot_P-wetherbeei_contig6052.1.1 ID=prot_P-wetherbeei_contig6052.1.1|Name=mRNA_P-wetherbeei_contig6052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp NAARLVAALRALRMDMGLVADDVLKPSGRDMVLLVLHLFQDLPQMVPRAEback to top mRNA from alignment at P-wetherbeei_contig6052:1885..2489- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6052.1.1 ID=mRNA_P-wetherbeei_contig6052.1.1|Name=mRNA_P-wetherbeei_contig6052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=605bp|location=Sequence derived from alignment at P-wetherbeei_contig6052:1885..2489- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6052:1885..2489- >mRNA_P-wetherbeei_contig6052.1.1 ID=mRNA_P-wetherbeei_contig6052.1.1|Name=mRNA_P-wetherbeei_contig6052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig6052:1885..2489- (Phaeothamnion wetherbeei SAG_119_79)back to top |