mRNA_P-wetherbeei_contig604.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig604.4.1
Unique NamemRNA_P-wetherbeei_contig604.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 4.450e-103
Identity = 172/296 (58.11%), Postives = 211/296 (71.28%), Query Frame = 3
Query:   87 GTYEICSQVPA---GLEGKS-VVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERS--FAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLK-EKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKPRASYFRVARMEIVDAF 953
            G+  I S++P    GL+G+  V++GIDEAGRGPVLGPM YG AYWS   D E+S  GFDDSKAL  +QR  LF RI   P++G+ +RLISARELS KM R+VPYSLN ISH AA  L+R VQARGV V+ V+VDTVGDP  Y++ L +EFG  +KF VAKKADSLYKT SAASI AKVTRD I+  W++ E +  F+    YGSGYPGD +CK W+E ++DPVFGFP++CRFSW TTKE+LK     RV+WEEE ++     AAG   I SFM    KK RA+ F    +E+VD F
Sbjct:   29 GSALISSKIPPRCRGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEFGKGIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSEDRKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSWGTTKEILKGPTRKRVDWEEEPDEE----AAGMNSIASFMVQPKKKARANLFVKRGLELVDTF 320          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A835YL34_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL34_9STRA)

HSP 1 Score: 303 bits (776), Expect = 1.260e-99
Identity = 159/277 (57.40%), Postives = 195/277 (70.40%), Query Frame = 3
Query:  144 MGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERS-FAGGTD---YGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEE---DGKAAAAAGTARIDSFMRPAGKKPRASYFRVARMEIVDAF 953
            MGIDEAGRGPVLGPM YG AYWS   D  + K G+DDSKAL E++R+KL++ I    +IG+ +R++ ARELS +MLRR P+SLN ISHAAA  ++R    R V ++HV+VDTVGDP  Y   L REF P + FTVAKKADSLYKTVSAASICAKV RD  L RW YRE   FAG      YGSGYPGDARC AW+  H+D +FGFP++ RFSWST ++LL+   A+VEWEEEEE    G      G  ++D+F   +G+ PR  YF+ AR+E   AF
Sbjct:    1 MGIDEAGRGPVLGPMTYGAAYWSMNDDEAIKKLGYDDSKALSEDKREKLYKGIMAEQRIGWVLRVLGARELSARMLRRAPHSLNAISHAAAAEMIRHALGRAVALTHVYVDTVGDPDNYARALRREF-PGIGFTVAKKADSLYKTVSAASICAKVVRDRALARWRYREPGVFAGDAAARAYGSGYPGDARCSAWLRSHVDTIFGFPDVARFSWSTARDLLEAAAAKVEWEEEEEGDVQGGFGGPQGAPKLDAFFTRSGQAPRTQYFKRARIERTYAF 276          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK)

HSP 1 Score: 288 bits (736), Expect = 3.780e-93
Identity = 153/280 (54.64%), Postives = 194/280 (69.29%), Query Frame = 3
Query:  126 EGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRE--RSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTT-KELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKPR-ASYFRVARMEIVDAF 953
            +G   ++GIDEAGRGPV+GPMVYG AYWS+  D E+S  GFDDSKAL  +QR  LF +I+E P +G+ +R ISA E+S +MLR+VP SLN IS+AAA+ +++     GV ++ V+VDTVGDP AY+  L+R F   + FTVAKKADSLYKTVSAASICAKVTRD +L  W + E    FAGG   GSGYP D +C AW+  H+DPVFGFP + RFSW    +E+L+EK ARVEW+E+E         G   I  F++PA KK R A YF    +E+V  F
Sbjct:   31 KGPECILGIDEAGRGPVMGPMVYGAAYWSKADDEEISAMGFDDSKALTADQRASLFDKIKETPSVGWVIRSISAEEISNQMLRKVPVSLNIISYAAAMQMIQTALDDGVNITKVYVDTVGDPAAYQERLTRHFKGAIDFTVAKKADSLYKTVSAASICAKVTRDRLLEGWVFPEGPAGFAGGAAMGSGYPSDEKCVAWLRAHVDPVFGFPNIVRFSWGGAGREILEEKAARVEWDEDE-----GPPPGMQSIAGFLQPANKKRRRAKYFHQRGLEVVHDF 305          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: W7TUP4_9STRA (Ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP4_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.170e-89
Identity = 161/290 (55.52%), Postives = 195/290 (67.24%), Query Frame = 3
Query:  114 PAGLEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQR-IREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFG---PDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRER-SFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKP-----RASYFRVARMEIVDAF 953
            PA   G+ V +GIDEAGRGPVLGPMVY  A+W  E D  +   GFDDSKAL E+ RD LFQR +R H Q+G+ +  I A E++ KML R P SLN ISH +A  ++  V A GV V+ VFVDTVGDP  Y+  L   FG   P + FTVAKKADSLYKTVSAASI AKVTRD  +R W + E    A  TD+GSGYPGDARC  W+ K+ +PVFGFP L RFSWSTT+EL++++   VEWEEEEE+G     AGTA I++F++P    P     RA YF+   ME V  F
Sbjct:   60 PALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENG--GLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A5D6XNI5_9STRA (Ribonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNI5_9STRA)

HSP 1 Score: 259 bits (661), Expect = 9.000e-82
Identity = 140/281 (49.82%), Postives = 188/281 (66.90%), Query Frame = 3
Query:  123 LEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKP----RASYFRVARMEIVDAF 953
            L G  V++GIDEAGRGPVLGPMVYG A+W    DA+LS  GFDDSKAL  E R++LF ++R   Q+G+ VRLISA+E+S KM R+   +LN +S  AA+ ++R  QA+GV V+HV+VDTVGDP  Y+  L+++F   ++F V KKADSL+K VSAASI AKVTRD  +  W++   +     D+GSGYP D R K W+  +L+P+F FP + RFSW T +  L  K  +VEW  E+E  KA+A AGT  I SF++   K P    R S+F   +++ V  F
Sbjct:   30 LHGAPVMLGIDEAGRGPVLGPMVYGAAFWPVAQDAKLSAMGFDDSKALSAETREQLFAKMRATDQLGWVVRLISAQEISDKMQRQTS-NLNEMSRNAAIQMIRATQAKGVNVTHVYVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRAISEWKWEAPALDLPKDFGSGYPSDPRTKTWLVDNLEPLFAFPNIVRFSWGTVEPFLA-KAVKVEWPHEKELDKASAPAGTQSITSFLQAPKKAPSAAKRTSFFADRKLQDVTDF 308          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A1V9Z9W9_9STRA (Ribonuclease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9W9_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.370e-81
Identity = 138/283 (48.76%), Postives = 186/283 (65.72%), Query Frame = 3
Query:  105 SQVPAG-LEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKK-PRASYFRVARMEIVD 947
            S+VPA  L+  +V++GIDEAGRGP+LGPMVYG AYW ++ D  +   GFDDSKAL  + R+KLF +I+    +G+  R+I A E+S  ML R   +LN +S  AA+ ++  V+ RGV + HV+VDTVGDPG Y++ L++ F   + FTV KKADS YK VSAASICAKVTRD  + +WE+   S   G +YGSGYP D + K W+   ++PVFG+P + RFSW T +  L ++ A VEW  E+EDG      GT  I SFM    KK  R+ YF   R+++V 
Sbjct:    6 SEVPASCLDEHNVILGIDEAGRGPILGPMVYGAAYWPQDMDETMRTMGFDDSKALSHQVREKLFDKIKATEDVGYVTRVIPAAEISHNMLTR-RRNLNEMSRDAAIEMILAVKKRGVNIVHVYVDTVGDPGWYQSFLTKHFNGTITFTVEKKADSKYKVVSAASICAKVTRDAQVSQWEWEHASIQLGKEYGSGYPSDPKTKQWLADSVEPVFGYPNIVRFSWGTMESYL-DRMANVEWPHEKEDGPK----GTQSIMSFMNTTTKKRKRSPYFEQNRLQVVS 282          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A6G0WAN8_9STRA (Ribonuclease n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAN8_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.800e-80
Identity = 141/282 (50.00%), Postives = 184/282 (65.25%), Query Frame = 3
Query:  105 SQVPAG-LEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKPRASYFRVARMEIVD 947
            S VPA  L+G  V++GIDEAGRGP+LGPMVYG AYW  E DA +S  GFDDSKAL  E R++LF +I+    +G+  R I A E+S  ML R   +LN +S  AA+ ++  VQ RGV V HV+VDTVGDP  Y+  L++ F   + FTV KKADSL+K VSAASICAKVTRD  +  W +   +    TD+GSGYP D +CK W+  ++DP+FG+P + RFSW T  E  K++   VEW  ++EDGK     GT  I SFM    K+ R++YF    +E+V 
Sbjct:    5 SPVPACCLDGAEVMLGIDEAGRGPILGPMVYGAAYWRVEDDATMSAQGFDDSKALTHEVRERLFAKIQATTDMGYVTRTIPATEISHNMLTR-RRNLNEMSRDAAIEMINAVQKRGVRVVHVYVDTVGDPKWYQTFLTKHFQGMIVFTVEKKADSLFKVVSAASICAKVTRDASVSSWTWEAPAIKLNTDFGSGYPSDPKCKQWLADNIDPIFGYPNIVRFSWGTL-ESYKDRLVPVEWVHDKEDGKPT---GTQSILSFMTTK-KRKRSAYFTQNNLEVVS 280          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: K3WMP3_GLOUD (Ribonuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP3_GLOUD)

HSP 1 Score: 250 bits (638), Expect = 2.660e-78
Identity = 139/297 (46.80%), Postives = 193/297 (64.98%), Query Frame = 3
Query:   90 TYEICSQVPAG-LEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMR--------PAGKKPRASYFRVARMEIVDAF 953
            T  + S VP   L G  V++GIDEAGRGPV+GPMVYG A+W    + E+S  GFDDSKAL  E R+ LF++++ + ++G+ VR+ISA+E+S KM R+   +LN +S  AA+ ++R  QA+GV V  VFVDTVGDP  Y+  L+++F   ++F V KKADSL+K VSAASI AKVTRD I+  WE+   +     D+GSGYP D + KAW+ +H+D +FGFP + RFSW T +  L  K  +VEW  ++E  KA    GT  I SF++        PA K+PR  +F   +++ V  F
Sbjct:   16 TILLASDVPENCLNGVPVMLGIDEAGRGPVMGPMVYGAAFWPVAQNDEMSALGFDDSKALSAESREGLFEKMKANKELGWIVRMISAQEISDKMQRQTS-NLNEMSRDAAIQMIRETQAKGVNVKQVFVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRIIVDWEWEAPALNLRKDFGSGYPSDPKTKAWLSEHMDDLFGFPNIVRFSWGTIEPFLL-KAVKVEWPHDKELEKANTPTGTQSITSFLQAPKKDKTQPAAKRPR--FFADRKLQDVTDF 308          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: A0A067C1L6_SAPPC (Ribonuclease n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1L6_SAPPC)

HSP 1 Score: 248 bits (633), Expect = 7.080e-78
Identity = 138/281 (49.11%), Postives = 182/281 (64.77%), Query Frame = 3
Query:  105 SQVPAG-LEGKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMR-PAGKKPRASYFRVARMEI 941
            S+VPA  L+G  V++GIDEAGRGP+LGPMVYG AYW    D+ +   GFDDSKAL  + R +LF +I+    +G+  R ISA E+S  ML R   +LN +S  AA+ ++  VQ  GV ++HV+VDTVGDPG Y++ L++ FG  + FTV KKADSLYK VSAASI AKVTRD  +  W +   S     DYGSGYP D + K W+  H++ VFG+P + RFSW T +  L ++ A VEW  ++ED    A AGT  I SFM+ P  K+ R  YF    +E+
Sbjct:    6 SRVPASCLDGADVMLGIDEAGRGPILGPMVYGAAYWPVSLDSTMRAMGFDDSKALSHDSRTQLFAKIKATADVGYVTRSISAAEISHNMLTR-RRNLNEMSRDAAIEMILAVQKAGVRLTHVYVDTVGDPGWYQSFLTKRFGGAITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWTWEHASLKLPIDYGSGYPSDPKTKQWLAAHVERVFGYPNILRFSWGTLESYL-DRMAAVEWPHDKED----APAGTQSIKSFMQTPTKKRKRTPYFVQNHLEV 280          
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Match: W4FTP4_9STRA (Ribonuclease n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTP4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 7.540e-78
Identity = 138/276 (50.00%), Postives = 175/276 (63.41%), Query Frame = 3
Query:  129 GKSVVMGIDEAGRGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHPQIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSHVFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTRDGILRRWEYRERSFAG-GTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRFSWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAG--KKPRASYFRVARMEIVD 947
            G  V++GIDEAGRGPVLGPMVYG AYW  + DA +S  GFDDSKAL  E R +LF +I+    +G+  R I A E+S  ML R   +LN +S  AA+ ++  VQ  GV V HV+VDTVGDPG Y   L++ F   + FTV KKADSL+K VSAASICAKVTRD ++  W+Y     A   TD+GSGYP D +CK W+   L+PVFG+P + RFSW T  E    +   V W  ++ED    A  GT  I +FM  +   K+ RA+YF  A +EIV 
Sbjct:   15 GVDVMLGIDEAGRGPVLGPMVYGAAYWRVQDDAVMSSQGFDDSKALTHESRQRLFDKIKATTDMGYVTRTIDATEISHNMLTR-RRNLNEMSRDAAIEMIVAVQNAGVNVKHVYVDTVGDPGWYRMFLTKHFHGKIVFTVEKKADSLFKVVSAASICAKVTRDAVVASWQYESSGLAKLDTDFGSGYPSDPKCKRWLHDALEPVFGYPNIVRFSWGTL-ESYNNRLVDVTWPHDKED----APVGTQSIAAFMTTSTTKKRKRAAYFSQANLEIVQ 284          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig604.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP9_ECTSI4.450e-10358.11Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835YL34_9STRA1.260e-9957.40Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A6V1NB11_HETAK3.780e-9354.64Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
W7TUP4_9STRA2.170e-8955.52Ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A5D6XNI5_9STRA9.000e-8249.82Ribonuclease n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A1V9Z9W9_9STRA3.370e-8148.76Ribonuclease n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A6G0WAN8_9STRA1.800e-8050.00Ribonuclease n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
K3WMP3_GLOUD2.660e-7846.80Ribonuclease n=1 Tax=Globisporangium ultimum (stra... [more]
A0A067C1L6_SAPPC7.080e-7849.11Ribonuclease n=2 Tax=Saprolegnia TaxID=4769 RepID=... [more]
W4FTP4_9STRA7.540e-7850.00Ribonuclease n=8 Tax=Aphanomyces astaci TaxID=1120... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig604contigP-wetherbeei_contig604:4939..6572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRP9
PFAMsRNase_HII
Model size956
Max annot lvl2759|Eukaryota
KEGG koko:K06618,ko:K10743
KEGG Pathwayko01522,ko03030,ko04110,ko04218,ko04934,ko05161,ko05165,ko05166,ko05167,ko05169,ko05200,ko05203,ko05212,ko05214,ko05215,ko05218,ko05219,ko05220,ko05222,ko05223,ko05224,ko05225,ko05226,map01522,map03030,map04110,map04218,map04934,map05161,map05165,map05166,map05167,map05169,map05200,map05203,map05212,map05214,map05215,map05218,map05219,map05220,map05222,map05223,map05224,map05225,map05226
KEGG ModuleM00692
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
Exons4
Evalue6.31e-104
EggNOG OGsCOG0164@1|root,KOG2299@2759|Eukaryota
Ec32 ortholog descriptionRibonuclease H-like domain
Ec32 orthologEc-12_000610.1
EC3.1.26.4
DescriptionRNA-DNA hybrid ribonuclease activity
Cds size942
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03000,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186884.7956448-UTR-P-wetherbeei_contig604:4938..49521683186884.7956448-UTR-P-wetherbeei_contig604:4938..4952Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig604 4939..4952 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186884.8081365-CDS-P-wetherbeei_contig604:4952..50081683186884.8081365-CDS-P-wetherbeei_contig604:4952..5008Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 4953..5008 +
1683186884.8186996-CDS-P-wetherbeei_contig604:5117..53551683186884.8186996-CDS-P-wetherbeei_contig604:5117..5355Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 5118..5355 +
1683186884.8290832-CDS-P-wetherbeei_contig604:5622..58891683186884.8290832-CDS-P-wetherbeei_contig604:5622..5889Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 5623..5889 +
1683186884.8390474-CDS-P-wetherbeei_contig604:6191..65721683186884.8390474-CDS-P-wetherbeei_contig604:6191..6572Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 6192..6572 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig604.4.1prot_P-wetherbeei_contig604.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig604 4953..6572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig604.4.1

>prot_P-wetherbeei_contig604.4.1 ID=prot_P-wetherbeei_contig604.4.1|Name=mRNA_P-wetherbeei_contig604.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=314bp
MTEAKGPTAEERMASEETSASDDAGTYEICSQVPAGLEGKSVVMGIDEAG
RGPVLGPMVYGCAYWSEEHDAELSKAGFDDSKALKEEQRDKLFQRIREHP
QIGFAVRLISARELSQKMLRRVPYSLNGISHAAAVGLVRGVQARGVTVSH
VFVDTVGDPGAYEAMLSREFGPDVKFTVAKKADSLYKTVSAASICAKVTR
DGILRRWEYRERSFAGGTDYGSGYPGDARCKAWMEKHLDPVFGFPELCRF
SWSTTKELLKEKGARVEWEEEEEDGKAAAAAGTARIDSFMRPAGKKPRAS
YFRVARMEIVDAF*
back to top

mRNA from alignment at P-wetherbeei_contig604:4939..6572+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig604.4.1 ID=mRNA_P-wetherbeei_contig604.4.1|Name=mRNA_P-wetherbeei_contig604.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1634bp|location=Sequence derived from alignment at P-wetherbeei_contig604:4939..6572+ (Phaeothamnion wetherbeei SAG_119_79)
CGGGAAAACAGACAATGACCGAAGCAAAGGGTCCCACCGCCGAGGAAAGG ATGGCATCGGAAGAGACCAGGTCCGTTCGTGATTGGTTTTCCTCCCTCGC TGCATTTTAATCACAAACCCGATCACAAGAGCCCTTTCTTCTCCGACTTC CTTCACCCTCATTCACGCAAACCTTGCAGCGCTTCTGACGACGCCGGCAC GTATGAGATCTGCAGCCAGGTCCCCGCGGGGCTCGAAGGGAAGAGCGTGG TCATGGGCATTGACGAGGCCGGGCGCGGCCCCGTCCTCGGCCCCATGGTC TACGGCTGTGCCTACTGGAGCGAAGAACACGACGCAGAGCTGTCTAAGGC GGGCTTTGACGACTCCAAGGCGCTGAAAGAGGAGCAGAGGGATAAACTCT TCCAGAGAATACGAGAGGTGCGGCTGGAGGACACTTTTCTTCTCCCTTTT GCTCAACTCCTGCATGGAACTCATTGACATGGTGTTGATATTGTCAGTGT CCACTTGAGGAATTGTAATAACGTTCCTTTCCTTTTGCTGCTGAATGGTA GCCGCCATCCCTCCATCACAGTTGGCCCGTCTACTGGGGGCATCTGGCAA TGCACCGAGATAGCTGTCTTCGTCCCATCCTCAATCCCAACCGCAAAATC CCGACCGTACGCCCGCCCCGCCCGGCCCCTGCAGCACCCGCAAATCGGTT TTGCCGTGCGGCTCATCTCTGCCCGCGAGCTCAGCCAGAAGATGCTGCGG CGCGTGCCTTACAGCCTCAACGGCATCTCCCACGCCGCCGCCGTCGGGCT GGTCCGGGGCGTGCAGGCCCGCGGCGTCACCGTGTCGCACGTCTTCGTGG ACACGGTGGGCGACCCCGGGGCGTACGAGGCCATGTTGTCACGGGAGTTC GGGCCGGACGTCAAGTTCACGGTCGCGAAAAAGGCCGACAGCCTCTACAA GGTGAGCAAATGGACAACGGCTTACGGAGAAGCCGGCCGGGAGCGGGAAA TGGGAGAGGCAGGTGCAATGGGAAAGAAGGCAAATGGTTTCCACACCTTA GCTAGTTGGTAAAGTGAACGGAATGGGCAACCTGATAAGGAATGGCTGGG GTGGATGTTTTTGGACAGGAAGTCAGGCTTTGAGGCAAGGAAGGATGCTT CACCTCATCCTGATGCCGCCGATCTCCTTCCTCATGGTGGTTGTCGCTTT CCGTTCCCTCTCCTGATGCCTGCCACGACTGGCCCGCCCTCTGCACGCCG CAGACGGTGTCGGCGGCCTCCATCTGCGCCAAGGTGACGCGCGACGGTAT CCTGCGCCGCTGGGAATACCGCGAACGATCCTTCGCCGGCGGCACCGACT ATGGCAGCGGCTACCCAGGCGATGCCCGCTGCAAGGCCTGGATGGAAAAG CACTTGGACCCCGTCTTCGGGTTCCCGGAGCTCTGCCGCTTTTCCTGGTC GACAACGAAAGAGCTGCTGAAGGAGAAGGGGGCTCGGGTGGAGTGGGAAG AAGAGGAGGAGGATGGCAAGGCGGCGGCGGCGGCGGGCACGGCGCGAATT GACAGCTTCATGCGGCCAGCGGGCAAGAAACCGCGGGCGAGCTACTTCCG GGTGGCACGCATGGAGATTGTCGACGCCTTTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig604:4939..6572+

>mRNA_P-wetherbeei_contig604.4.1 ID=mRNA_P-wetherbeei_contig604.4.1|Name=mRNA_P-wetherbeei_contig604.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig604:4939..6572+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGAAGCAAAGGGTCCCACCGCCGAGGAAAGGATGGCATCGGAAGA
GACCAGCGCTTCTGACGACGCCGGCACGTATGAGATCTGCAGCCAGGTCC
CCGCGGGGCTCGAAGGGAAGAGCGTGGTCATGGGCATTGACGAGGCCGGG
CGCGGCCCCGTCCTCGGCCCCATGGTCTACGGCTGTGCCTACTGGAGCGA
AGAACACGACGCAGAGCTGTCTAAGGCGGGCTTTGACGACTCCAAGGCGC
TGAAAGAGGAGCAGAGGGATAAACTCTTCCAGAGAATACGAGAGCACCCG
CAAATCGGTTTTGCCGTGCGGCTCATCTCTGCCCGCGAGCTCAGCCAGAA
GATGCTGCGGCGCGTGCCTTACAGCCTCAACGGCATCTCCCACGCCGCCG
CCGTCGGGCTGGTCCGGGGCGTGCAGGCCCGCGGCGTCACCGTGTCGCAC
GTCTTCGTGGACACGGTGGGCGACCCCGGGGCGTACGAGGCCATGTTGTC
ACGGGAGTTCGGGCCGGACGTCAAGTTCACGGTCGCGAAAAAGGCCGACA
GCCTCTACAAGACGGTGTCGGCGGCCTCCATCTGCGCCAAGGTGACGCGC
GACGGTATCCTGCGCCGCTGGGAATACCGCGAACGATCCTTCGCCGGCGG
CACCGACTATGGCAGCGGCTACCCAGGCGATGCCCGCTGCAAGGCCTGGA
TGGAAAAGCACTTGGACCCCGTCTTCGGGTTCCCGGAGCTCTGCCGCTTT
TCCTGGTCGACAACGAAAGAGCTGCTGAAGGAGAAGGGGGCTCGGGTGGA
GTGGGAAGAAGAGGAGGAGGATGGCAAGGCGGCGGCGGCGGCGGGCACGG
CGCGAATTGACAGCTTCATGCGGCCAGCGGGCAAGAAACCGCGGGCGAGC
TACTTCCGGGTGGCACGCATGGAGATTGTCGACGCCTTTTAG
back to top