mRNA_P-wetherbeei_contig6033.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.040e-70 Identity = 115/155 (74.19%), Postives = 125/155 (80.65%), Query Frame = 1
Query: 58 EHSSHKFQDFIGNFLAQVPFEAVDVWVPLSRQGDSSGVVLFHAGYFTNVPELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDTVQLTGALREFIERTVTQWKFDATFD 522
E + FQDF+G+FL QVPFEAVDVWVPL+RQ VVLFHAGYFTN ELEEWG+YSTNFSF GEGLPGRV+ SNTSEWQ DV +NMFLRLNGA++ GIRTTFGVPVVSRRGVTFVIVFYSR TV + ALR FIERTV WKFDA D
Sbjct: 472 EGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI) HSP 1 Score: 230 bits (586), Expect = 5.150e-68 Identity = 110/156 (70.51%), Postives = 128/156 (82.05%), Query Frame = 1
Query: 64 SSHKFQDFIGNFLAQVPFEAVDVWVPLSRQG-DSSGVVLFHAGYFTNVPELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDTVQLTGALREFIERTVTQWKFDATFDSE 528
SSH+F+DFIGNFL Q+PFEAVDVWVPL Q + S VVLFHAGYFTNV ELEEWGDYSTNFSF G+GLPGRVY +N SEWQ +V ++ FLRLNGA+ +GIRT+FGVPVVSR GVTFVIVFYSR VQ+ ++ FIERTV+ WKFDAT D++
Sbjct: 618 SSHRFEDFIGNFLDQIPFEAVDVWVPLCNQDQEGSEVVLFHAGYFTNVKELEEWGDYSTNFSFRQGQGLPGRVYANNKSEWQENVVNLNHAHFLRLNGAMNIGIRTSFGVPVVSRWGVTFVIVFYSRVAVQMDADMKAFIERTVSAWKFDATVDTD 773
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A6H5JBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ8_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.440e-60 Identity = 98/156 (62.82%), Postives = 117/156 (75.00%), Query Frame = 1
Query: 61 HSSHKFQDFIGNFLAQVPFEAVDVWVPL-SRQGDSSGVVLFHAGYFTNVPELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDTVQLTGALREFIERTVTQWKFDATFDS 525
+ H F+ FI NFL QVPFEAVDVWVPL R + S VVLFHAGYFTNV EL+EWGDYSTNFSF G+G+PGRV+ SN SE+ +V D +MFLRLNGA ++GI T+F +PVVSR GVTFVIVFY+R T+QL + FIE V W+ DAT D+
Sbjct: 130 NDDHPFEQFIANFLDQVPFEAVDVWVPLCDRDQEGSEVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQLDAEKKVFIENMVRGWELDATVDT 285
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: D8LLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI8_ECTSI) HSP 1 Score: 182 bits (462), Expect = 9.280e-54 Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 61 HSSHKFQDFIGNFLAQVPFEAVDVWVPL-SRQGDSSGVVLFHAGYFTNVPELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDTVQLTGALREFIERTV 492
+ H F+ FI NFL QVPFEAVDVWVPL R + S VVLFHAGYFTNV EL+EWGDYSTNFSF G+G+PGRV+ SN SE+ +V D +MFLRLNGA ++GI T+F +PVVSR GVTFVIVFY+R T+Q G RE ++V
Sbjct: 176 NDDHPFEHFIANFLDQVPFEAVDVWVPLCDRDQEGSDVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQ--GEKRESAFKSV 318
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A1Z5KJS1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS1_FISSO) HSP 1 Score: 103 bits (258), Expect = 1.390e-22 Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 76 FQDFIGNFLAQ--VPFEAVDVWVPLSRQGDSSG--VVLFHAGYFTNVP-------ELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDTVQLTGALREFIERTVTQW 501
F + + +F+ Q +PFE VD+WVP +GD G + L+HAG T + E+G+YST FSF +G GLPGRVY ++ W+ + + D +F R GA G++T FGVPVVS+ V+VFYS +Q + E I +++++
Sbjct: 402 FVEELVSFIEQENLPFEHVDLWVPSFAEGDGPGNEMRLYHAGQGTRGDLDASLYYRMCEYGEYSTKFSFAVGHGLPGRVYCTDKPSWERHIHEQDPKIFERAGGAKMYGVKTGFGVPVVSKSIGRIVVVFYSVHDIQPDLQMMERIVASLSKY 554
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A1Z5KSW9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSW9_FISSO) HSP 1 Score: 97.1 bits (240), Expect = 3.600e-20 Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 1
Query: 76 FQDFIGNFLAQ--VPFEAVDVWVPLSRQGDSSG--VVLFHAGYFTNVP-------ELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYS 438
F + + +F+ Q +PFE VD+WVP +G+ G + L+H G T + E+G+YST FSF +G GLPGRVY ++ W+ + + D +F R GA G++T FGVPV+S+ V+VFYS
Sbjct: 402 FVEELLSFIEQENLPFEHVDLWVPSFAEGNGPGNEMRLYHGGQGTRGDLDASLYYRMCEYGEYSTRFSFAVGHGLPGRVYSTDMPSWERHIHEQDPKIFERAGGARMYGVKTGFGVPVLSKSIGRIVVVFYS 533
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A7S1Y4Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4Q5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.080e-16 Identity = 59/169 (34.91%), Postives = 76/169 (44.97%), Query Frame = 1
Query: 109 VPFEAVDVWVP---------LSRQGDSSGVVLFHAGYFT-----------NVP-------ELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDT----VQLTGALREFIERTVTQWKFDATFD 522
VPFE VD+WVP + S+ L +AG T NVP L +GDYS FSF++G GLPGRVY + W+ VQ + F R GALQ GI+T G+P+ S V+ YSR +L G L E R + K+ D
Sbjct: 365 VPFEHVDLWVPSFVPTTGEAAAAPDGSTSCRLCYAGSATADFQAGPDGKVNVPLDHEALFNLHAFGDYSQKFSFDVGCGLPGRVYQTGLPTWEQSVQNAPHEHFERCGGALQWGIKTVVGIPIASPNVGRIVVTLYSRSDREKDQELVGRLSEEFTRLMPSPKWKLVVD 533
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A1Z5KQF7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQF7_FISSO) HSP 1 Score: 86.7 bits (213), Expect = 1.470e-16 Identity = 56/151 (37.09%), Postives = 74/151 (49.01%), Query Frame = 1
Query: 70 HKFQDFIGNFL-----AQVPFEAVDVWVP--LSRQGDSS------------GVVLFHA--GYFTNVP-------ELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYS 438
H FIG + +PFE VD+WVP +S+ D G +H G + VP +L +G+YS FSF++G GLPGRVY + S W+ +Q + F R GA+Q GI+T GVPV S VIVFYS
Sbjct: 330 HFSSPFIGKVVDYMQRTNIPFEHVDIWVPSFVSQTPDDESGGKCRLCFAGCGTADYHVPPGESSPVPLSGESQFDLISFGEYSQKFSFDVGCGLPGRVYLTGVSSWEQGIQSAPSGQFERKGGAVQWGIQTVLGVPVPSPNVGRVVIVFYS 480
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A7S1Z627_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z627_TRICV) HSP 1 Score: 86.3 bits (212), Expect = 1.880e-16 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 58 EHSSHKFQDFIGNFLAQ--VPFEAVDVWVPL-------SRQGDS-SGVVLFHAGYFT-----------NVP---------ELEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRD 444
+H+S F + N+L + VPFE VD WVP S G+S S L AG+ T N P +L +G+YS FSFN+G GLPGRVY S W+ VQ ++ F R GALQ G++T G+P+ S V+V YS++
Sbjct: 38 QHAS-PFLSKVINYLQRHGVPFEHVDAWVPSFVPNENSSANGNSDSKCRLCFAGFATADVFLTADVEGNAPKLISRADQYDLISFGEYSQKFSFNVGCGLPGRVYQSGVPTWEQSVQNAPHHHFERCGGALQWGVKTVVGLPIPSPNVGRIVLVLYSKE 195
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Match: A0A7S4HQ09_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HQ09_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.700e-16 Identity = 59/167 (35.33%), Postives = 77/167 (46.11%), Query Frame = 1
Query: 109 VPFEAVDVWVP--------------------LSRQGDSSGVVLFHAGYFTNVPE---------LEEWGDYSTNFSFNLGEGLPGRVYYSNTSEWQPDVQQTDNNMFLRLNGALQLGIRTTFGVPVVSRRGVTFVIVFYSRDT----VQLTGALREFIERTVT--QWK 504
VPFE VD WVP L G ++G L +G N + L +G+YS FSFN+G GLPGRVY S W+ VQ ++ F R GALQ GI+T G+P+ S V+V YSR+ QL G L E + + +WK
Sbjct: 356 VPFEHVDAWVPSFVPGEGGTVGGNNADSKCRLCFAGFATGDYLVRSGLNGNSSQSLAMEDQFSLVAFGEYSQKFSFNVGCGLPGRVYQSGVPTWEQSVQNAPHHHFERCGGALQWGIKTVVGLPIPSPNVGRIVLVLYSREDREKDQQLVGKLCEEFSKFMPTPKWK 522 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6033.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6033.1.1 >prot_P-wetherbeei_contig6033.1.1 ID=prot_P-wetherbeei_contig6033.1.1|Name=mRNA_P-wetherbeei_contig6033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp GVAAGGGDGSSSSTADEDEEHSSHKFQDFIGNFLAQVPFEAVDVWVPLSRback to top mRNA from alignment at P-wetherbeei_contig6033:2081..3094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6033.1.1 ID=mRNA_P-wetherbeei_contig6033.1.1|Name=mRNA_P-wetherbeei_contig6033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1014bp|location=Sequence derived from alignment at P-wetherbeei_contig6033:2081..3094- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6033:2081..3094- >mRNA_P-wetherbeei_contig6033.1.1 ID=mRNA_P-wetherbeei_contig6033.1.1|Name=mRNA_P-wetherbeei_contig6033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig6033:2081..3094- (Phaeothamnion wetherbeei SAG_119_79)back to top |