mRNA_P-wetherbeei_contig6021.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6021.1.1
Unique NamemRNA_P-wetherbeei_contig6021.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: I0YVZ2_COCSC (ARM repeat-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVZ2_COCSC)

HSP 1 Score: 86.7 bits (213), Expect = 2.840e-17
Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = 1
Query:   19 WLGILQWSLAQKD-FTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIAKQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLAALR 456
            W G+ +WS+ Q++  T P+      PED +W  EAM++   D  KRLR+I   + D  D    A   E L  LD+  +I EQID       +GG   LL L       A VRA AA V+ATCVQN+P  Q++   GG LP +L  L+
Sbjct:    6 WKGLFEWSIQQQEGSTDPATRRHITPEDRKWFMEAMQAQTTDIPKRLRDIKGALDDRDDS--DAQVGEKLKLLDDLVEIVEQIDYAKDLTHIGGLPTLLGLLGSS--HAPVRASAAEVVATCVQNHPPVQQMFLEGGTLPRLLQLLQ 148          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A8J9S853_9CHLO (Probable Hsp70 nucleotide exchange factor FES1 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S853_9CHLO)

HSP 1 Score: 84.3 bits (207), Expect = 2.050e-16
Identity = 59/146 (40.41%), Postives = 73/146 (50.00%), Query Frame = 1
Query:   10 KPGWLGILQWSLAQKDF-TAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIAKQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDML 444
            +P W G+ +WS+ Q+D  T PS       ED +W  EAM+S   D  KRLR I   + D  D    A   E L  LD+  +I E ID       +GG   LL L       A VRA AA V+ATCVQN+P  Q     GG LP +L
Sbjct:    3 QPDWKGLFEWSIQQQDHSTDPSTRRQITEEDRKWFMEAMQSQTEDVTKRLRGIKGALDDKDDS--DAQVGEKLKLLDDLVEIVEHIDYAKDLTHIGGLPTLLGLLGSA--HAPVRASAAEVVATCVQNHPPVQMHFLEGGVLPRLL 144          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A1V9Y7A9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7A9_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.190e-15
Identity = 58/151 (38.41%), Postives = 75/151 (49.67%), Query Frame = 1
Query:    1 MDEKPGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA-------------KQIADVADGAVPADE--DEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQE 408
            M +   W+G+L+WS+ Q+D T PS+     P D +WL   M+  V D+ +R+ +I              K I D    A   DE  D     LDE     +QIDN  TFVK+GG   LL L      RA+ RA AA V ATC QNNP  Q+
Sbjct:    1 MTDPNKWMGLLRWSMQQQDGTRPSEFKAMDPHDKEWLERVMKECVIDEIERMHQIIRIWSGEDPRVVLPKLIEDPPAQAFTQDEIDDYKEALLDEMLTRIDQIDNAQTFVKIGGLPSLLPLF--ESPRAETRALAAEVFATCAQNNPPVQK 149          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A834D3P2_JUGRE (TOG domain-containing protein n=7 Tax=Juglandaceae TaxID=16714 RepID=A0A834D3P2_JUGRE)

HSP 1 Score: 81.6 bits (200), Expect = 3.140e-15
Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   13 PGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            P W G+L+WSLA  D T P        ED +W  EAM+S   D  KR++EI       +Q+ + A G  PAD +++L   DE Q+  E ID       +GG  L+  L   +   A++RAKAA V+AT VQNNP++Q+L+     L  +L+
Sbjct:   70 PNWEGLLKWSLAHADGTQPPRN--LSEEDRRWFMEAMQSQTVDVIKRMKEITLVMQTPEQVLE-AQGVTPADIEDIL---DELQEHVESIDMANDLHSIGG--LVPLLGYLKNSHANIRAKAAEVVATIVQNNPRSQQLVMEANGLEPLLS 212          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: UPI000B8C91B2 (hsp70 nucleotide exchange factor fes1-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C91B2)

HSP 1 Score: 80.1 bits (196), Expect = 5.030e-15
Identity = 59/156 (37.82%), Postives = 81/156 (51.92%), Query Frame = 1
Query:    7 EKPGWLGILQWSLAQKDFTAP----SDVPPTRPEDMQWLREAMESMVRDDNKRLREIAKQIADV-----ADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            E PGW G+L+WSL+  D T P    SD      ED +W  EAM++   D  KR++EI   +        A G  P D   +   LDE Q+  E ID       +GG  L+  LA  +   A++RAKAA V+ T VQNNPQ+Q+L+     L  +L+
Sbjct:    4 EGPGWEGLLKWSLSHSDGTRPPCNLSD------EDRKWFLEAMQAQSVDVIKRMKEITLVMQTPENVLEAQGVTPED---IEGMLDELQEHVESIDMANDLNSIGG--LVPLLAYLKNSHANIRAKAAEVVTTIVQNNPQSQQLVMEANGLESLLS 148          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: B9IFW6_POPTR (TOG domain-containing protein n=3 Tax=Populus TaxID=3689 RepID=B9IFW6_POPTR)

HSP 1 Score: 79.7 bits (195), Expect = 1.250e-14
Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 1
Query:    7 EKPGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            E P W G+L+WSLA  D TAP+       ED +W  EAM+S   D  KR++EI       +Q+ + + G  PAD +E+L   DE Q+  E ID       +GG  L+  L   +   A VRAKAA V+ T VQNNP++Q+++        +L+
Sbjct:    4 EGPNWDGLLKWSLAHSDGTAPNRN--LSEEDRRWFTEAMQSQSVDVIKRMKEITLVMQTPEQVLE-SQGITPADIEELL---DELQEHVESIDMANDLHSIGG--LVPLLGFLKNTHASVRAKAAEVVTTIVQNNPRSQQMVMEANGFEPLLS 148          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: Q84J81_ARATH (Fes1A n=22 Tax=Brassicaceae TaxID=3700 RepID=Q84J81_ARATH)

HSP 1 Score: 79.3 bits (194), Expect = 1.460e-14
Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   13 PGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            P W G+L+WSL+  D T P+       ED +W  EAM+S   D  KR++EI       +Q+  V  G  P D   +   LDE Q+  E ID       +GG  L+  L+  +   A++RAKAA V++T VQNNP++QEL+    AL  +L+
Sbjct:    6 PNWDGLLKWSLSHADGTRPTRQ--LSEEDRKWFMEAMQSQTVDVVKRMKEITLVMQTPEQVL-VEHGVTPED---IQDLLDELQEHVESIDMANDLHSIGG--LVPLLSFLKNSHANIRAKAADVVSTIVQNNPRSQELVMETNALESLLS 148          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A8D9DPD6_BRACM ((field mustard) hypothetical protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9DPD6_BRACM)

HSP 1 Score: 79.0 bits (193), Expect = 3.250e-14
Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   13 PGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            P W G+L+WSL+  D T P+       ED +W  EAM+S   D  KR++EI       +Q+  V  G  P   D++   LDE Q+  E ID       +GG  L+  L   +   A++RAKAA V++T VQNNP++QEL+     L  +L+
Sbjct:    6 PNWDGLLKWSLSHADGTQPTRQ--LSEEDRKWFMEAMQSQTLDVVKRMKEITLVMQTPEQVL-VEHGVTP---DDIEDLLDELQEHVESIDMANDLHSIGG--LVPLLGFLKNSHANIRAKAADVVSTIVQNNPRSQELVMEANGLESLLS 148          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A816TQI8_BRANA ((rape) hypothetical protein (Fragment) n=1 Tax=Brassica napus TaxID=3708 RepID=A0A816TQI8_BRANA)

HSP 1 Score: 79.0 bits (193), Expect = 3.310e-14
Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   13 PGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGGRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            P W G+L+WSL+  D T P+       ED +W  EAM+S   D  KR++EI       +Q+  V  G  P   D++   LDE Q+  E ID       +GG  L+  L   +   A++RAKAA V++T VQNNP++QEL+     L  +L+
Sbjct:   31 PNWDGLLKWSLSHADGTRPTRQ--LSEEDRKWFMEAMQSQTLDVVKRMKEITLVMQTPEQVL-VEHGVTP---DDIEDLLDELQEHVESIDMANDLHSIGG--LVPLLGFLKNSHANIRAKAADVVSTIVQNNPRSQELVMEANGLESLLS 173          
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Match: A0A834TPE0_9FABA (Hsp70 nucleotide exchange factor fes1-like n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TPE0_9FABA)

HSP 1 Score: 75.9 bits (185), Expect = 4.140e-14
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   13 PGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNKRLREIA-------KQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGG-GRLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLA 447
            P W G+L+WSLA  D T P++      +D +WL+EA+++   D  KR++EI        K +   + G  P   D +   LDE Q+  E IDN      +GG   L+ +L   +   A++RAKAA VL T VQNNP +Q+L+     L  ++A
Sbjct:    6 PNWEGLLKWSLAHSDGTRPTNT--LSEDDKRWLKEALQAQSFDVIKRMKEITLVMKIPEKDLE--SQGITP---DNIEDLLDELQEHVESIDNANDLNTIGGLAPLIEYL---KNPHANIRAKAADVLTTIVQNNPVSQKLVMEARGLEHLIA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6021.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I0YVZ2_COCSC2.840e-1739.46ARM repeat-containing protein n=1 Tax=Coccomyxa su... [more]
A0A8J9S853_9CHLO2.050e-1640.41Probable Hsp70 nucleotide exchange factor FES1 at ... [more]
A0A1V9Y7A9_9STRA2.190e-1538.41Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A834D3P2_JUGRE3.140e-1538.41TOG domain-containing protein n=7 Tax=Juglandaceae... [more]
UPI000B8C91B25.030e-1537.82hsp70 nucleotide exchange factor fes1-like n=1 Tax... [more]
B9IFW6_POPTR1.250e-1437.91TOG domain-containing protein n=3 Tax=Populus TaxI... [more]
Q84J81_ARATH1.460e-1437.75Fes1A n=22 Tax=Brassicaceae TaxID=3700 RepID=Q84J8... [more]
A0A8D9DPD6_BRACM3.250e-1437.09(field mustard) hypothetical protein n=1 Tax=Brass... [more]
A0A816TQI8_BRANA3.310e-1437.09(rape) hypothetical protein (Fragment) n=1 Tax=Bra... [more]
A0A834TPE0_9FABA4.140e-1435.95Hsp70 nucleotide exchange factor fes1-like n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6021contigP-wetherbeei_contig6021:142..905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog248742.XP_005647105.1
PFAMsHEAT_2
Model size456
Max annot lvl3041|Chlorophyta
KEGG koko:K09562
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.66e-18
EggNOG OGsCOG0197@1|root,KOG2160@2759|Eukaryota,37RVA@33090|Viridiplantae,34M4Z@3041|Chlorophyta
Descriptionhsp70-binding protein
Cds size456
COG categoryO
BRITEko00000,ko00001,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186883.414952-CDS-P-wetherbeei_contig6021:141..4651683186883.414952-CDS-P-wetherbeei_contig6021:141..465Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6021 142..465 -
1683186883.4273477-CDS-P-wetherbeei_contig6021:773..9051683186883.4273477-CDS-P-wetherbeei_contig6021:773..905Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6021 774..905 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6021.1.1prot_P-wetherbeei_contig6021.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6021 142..905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6021.1.1

>prot_P-wetherbeei_contig6021.1.1 ID=prot_P-wetherbeei_contig6021.1.1|Name=mRNA_P-wetherbeei_contig6021.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
MDEKPGWLGILQWSLAQKDFTAPSDVPPTRPEDMQWLREAMESMVRDDNK
RLREIAKQIADVADGAVPADEDEVLTFLDEAQDICEQIDNGATFVKLGGG
RLLLWLAAQRGRRADVRAKAAAVLATCVQNNPQAQELLWRGGALPDMLAA
LR
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mRNA from alignment at P-wetherbeei_contig6021:142..905-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6021.1.1 ID=mRNA_P-wetherbeei_contig6021.1.1|Name=mRNA_P-wetherbeei_contig6021.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=764bp|location=Sequence derived from alignment at P-wetherbeei_contig6021:142..905- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGAGAAGCCAGGATGGTTGGGGATTTTGCAGTGGAGTCTGGCGCA GAAGGACTTCACGGCGCCCTCCGATGTCCCACCAACGCGACCTGAAGACA TGCAATGGCTACGAGAGGCGATGGAGAGCATGGTGCGTTACACACTCGAA AGTTGCTTAAACATTATGGAAATGCAGGATCTCCAAGTTTTCGAGGCTGT GTGGCCGTCAGTCATATCGTGTGATGATTGCTCTTTCTTCGAGAAGGGTT GGTGGTCATAAAGAAAGAACATTTGCACTGTCGCGTAGATTAAGAGCAAT CGTGCGTTTGATGTCCGCTGGCATAAATTATCGGTGTTGCTGTTGGTATT TTGTAAGGATGCCTTGGACTTATTTTCCGCTCTCTCTTCCCCGCCTCCGC ATCTCGTCATCGCCTAAATCCGGAATCATCTCTATCGCAGGTTCGCGACG ACAACAAGCGCCTCCGCGAGATCGCCAAGCAGATTGCGGACGTCGCCGAC GGGGCCGTCCCTGCCGACGAAGACGAGGTCCTAACGTTTCTCGACGAGGC CCAGGACATCTGCGAGCAAATTGACAACGGTGCCACCTTCGTCAAGCTTG GCGGCGGCCGCCTCCTCCTCTGGCTGGCGGCGCAGCGCGGCCGCCGGGCG GACGTCCGTGCCAAGGCGGCGGCCGTCCTGGCCACCTGCGTCCAGAACAA CCCGCAGGCGCAGGAGCTCCTCTGGCGCGGCGGCGCCCTCCCCGACATGC TGGCGGCGCTGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6021:142..905-

>mRNA_P-wetherbeei_contig6021.1.1 ID=mRNA_P-wetherbeei_contig6021.1.1|Name=mRNA_P-wetherbeei_contig6021.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig6021:142..905- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGAGAAGCCAGGATGGTTGGGGATTTTGCAGTGGAGTCTGGCGCA
GAAGGACTTCACGGCGCCCTCCGATGTCCCACCAACGCGACCTGAAGACA
TGCAATGGCTACGAGAGGCGATGGAGAGCATGGTTCGCGACGACAACAAG
CGCCTCCGCGAGATCGCCAAGCAGATTGCGGACGTCGCCGACGGGGCCGT
CCCTGCCGACGAAGACGAGGTCCTAACGTTTCTCGACGAGGCCCAGGACA
TCTGCGAGCAAATTGACAACGGTGCCACCTTCGTCAAGCTTGGCGGCGGC
CGCCTCCTCCTCTGGCTGGCGGCGCAGCGCGGCCGCCGGGCGGACGTCCG
TGCCAAGGCGGCGGCCGTCCTGGCCACCTGCGTCCAGAACAACCCGCAGG
CGCAGGAGCTCCTCTGGCGCGGCGGCGCCCTCCCCGACATGCTGGCGGCG
CTGCGC
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