mRNA_P-wetherbeei_contig6003.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE) HSP 1 Score: 114 bits (284), Expect = 5.840e-27 Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 1
Query: 127 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN--LAPTAA-------EAASGCKSHG--------------GDGGTDGGIRQSSASLPPSG--ELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADP 510
G L+ R VEKI + YA +AKRVDVRRLK D+W++IN L AA E G ++ DGG G P G ++ FS++V D+++ EEQ VT+PFYFICLLHLANEKGL+LEGR+DL D S+A+DP
Sbjct: 212 GLLAAGRRVEKISVNYAKKAKRVDVRRLKGDLWQKINTKLQSDAAVVDVYRDEGGGGAENRSEEEVENKDVESKSPADGGDKGKEEAEDVVKPAPGVVDMTFSNIVCDVASKEEQTGVTVPFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 364
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.040e-24 Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 127 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINL---APTAAEAASGCKSHGG----------------------DGGTDGGIRQSSASLPPSGE---LNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADP 510
G L+ R VEKI + YA +AKRVDVRRLK D+W++IN + A G + GG DGG D G ++ + P+ E + FS++V D+++ EEQ VT+ FYFICLLHLANEKGL+LEGR+DL D S+A+DP
Sbjct: 679 GLLAAGRRVEKISVNYAKKAKRVDVRRLKGDLWRKINTEFQSDAAVVDVDGGEGGGGAENPSEGEEEVENKDVESKSPADGG-DKGEEEAEDVVKPAPEVVDMTFSNIVCDVASKEEQTGVTVSFYFICLLHLANEKGLKLEGRDDLLDFSVASDP 833
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A835Z1S3_9STRA (Condensin complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S3_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.340e-21 Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 1
Query: 97 VDDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN-------------LAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAA 504
+DDD A L R VEK+++KYATRAK+VDVRRLK ++W+ I+ L A S GG Q P L FS V++++S+ E+Q VT+ +YFICLLHLANEKGLRLEG++DL D I A
Sbjct: 698 IDDDFDSAKL--LKADRVVEKVEVKYATRAKKVDVRRLKHNLWQHIDAVVPPPLPHGVSPLRTAPATPQSAAXXXXXXXXXTGGAAQ-----PEPEPLLFSSVLDEVSSKEDQSGVTVSYYFICLLHLANEKGLRLEGQDDLMDFGIGA 839
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: B7G0X0_PHATC (Condensin complex subunit 2 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0X0_PHATC) HSP 1 Score: 100 bits (249), Expect = 2.370e-21 Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 100 DDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAAS--GCKSHGGDGGTDGGIRQSSASLP--PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGREDLTDLSIAADPGAV 519
DD S++A L +R V+K+ + YAT AK+VDV+RLKKD+W I L AE A K H D D + S A P PS L+F V+DL A + Q VTLPFYFIC+LHLANEKGLRL+ L D I D V
Sbjct: 785 DDMSFVAP---LEDIRKVDKVHVGYATVAKKVDVKRLKKDLW--IELEAKLAEPAKLGEHKDHDAD---DSSMSLSDAVTPSKPSLPLSFQKAVQDLEATKTQADVTLPFYFICILHLANEKGLRLDSH-GLEDFGIVYDAAGV 919
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S1XKV0_9STRA (Condensin complex subunit 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKV0_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.570e-20 Identity = 64/132 (48.48%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 133 LSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINL-APTAAEAASGCKSHGGDGGTDGGIRQSSASLP-----PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEG--REDLTDLSIAA 504
L + VEK DI YA AKRVDVRRLKK++W ++ + A AE A + G +S A+ PSG L+F VV D++ E Q VT+PFYFICLLHLANEKGL+LE R DLTD I A
Sbjct: 370 LVNPKKVEKPDINYAKAAKRVDVRRLKKELWTKVEVDAAAEAENADPESPAAAEDSLPMGKTRSEAAAAAEAGDPSGGLSFQHVVRDMAKGEAQTGVTVPFYFICLLHLANEKGLKLENPNRADLTDFRIHA 501
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S1ZPC0_TRICV (Condensin complex subunit 2 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPC0_TRICV) HSP 1 Score: 94.0 bits (232), Expect = 1.670e-19 Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 1
Query: 79 GPGGDAVDDDSYIA----AFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELN---FSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGAVAAV 528
GP D DD ++ A + GVR VEKI + YAT AK+VDV+RLKKD+W + A T ++ ++ S ++P E N F + V +L + + Q VT+PFYFIC+LHLANEKGL+L+ LTD +I+ D G+ +V
Sbjct: 229 GPAFDGNDDGNFAAMDDFVIEDIEGVRKVEKIQVGYATVAKKVDVKRLKKDLWTEVE-AKTKTDSTIIADTN-----------NKSQTIPGPREKNQISFQETVMELESSQSQTEVTVPFYFICILHLANEKGLKLDSTGTGLTDFTISRDDGSAPSV 374
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S2YQ64_9STRA (Condensin complex subunit 2 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQ64_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.060e-18 Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 1
Query: 127 GALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLP--PSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR 474
G VR VEK+ + YAT AK+VDV+RLK+D+W I A E S + + D + P +G L+F D V+++ ++Q V+LP+YFIC LHLANEKGL LE R
Sbjct: 4 GDFEDVRKVEKLSVGYATVAKKVDVKRLKQDLWTEIESVMVAPEEKSSVEEDTKEDSMDVPDEITPVKTPCKSTGPLSFYDTVQEMERNKKQADVSLPYYFICQLHLANEKGLYLESR 121
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S4HYK3_9STRA (Condensin complex subunit 2 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYK3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.310e-18 Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 100 DDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRIN----LAPTAAEAAS-------GCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGA 516
D D Y+ + G+R VEKI I YA AK+VDV+RLKKD+W I+ + P +A + + + T + QS+ +++F + V +L A + Q VT+PFYFIC+LHLANEKGL+L+ +L D I+ D GA
Sbjct: 758 DADDYVVE--DIEGIRKVEKIQIGYAAVAKKVDVKRLKKDLWNHIDSSSEVEPKVVQAPVENTEVYVSAEENSKEHNTLDDVEQSNEPR----QISFKETVNELEASQSQSEVTVPFYFICILHLANEKGLKLDSTGHNLIDFVISRDDGA 902
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A7S4RKC8_9STRA (Condensin complex subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RKC8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.020e-17 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 97 VDDDSYIAAFGALSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGI-RQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRLEGR-EDLTDLSIAADPGA 516
V DD + + L G+R VEK+++ YAT AK+VDVR+LKK++W ++ A+ ASG K+H + + ++ + ++F D V ++ + Q VT+ +YFICLLHLANEKGLRL+ + L D + D G+
Sbjct: 74 VMDDDIVES---LDGIRKVEKVEVGYATVAKKVDVRKLKKELWAELD-----AKIASG-KAHEDKNDVSEMVPNEEFEAVAKTQPVSFQDTVREMDTTQSQVDVTIAYYFICLLHLANEKGLRLDSLGQSLDDFIVYRDDGS 206
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Match: A0A1Z5JDY9_FISSO (Condensin complex subunit 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDY9_FISSO) HSP 1 Score: 88.6 bits (218), Expect = 3.270e-17 Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 133 LSGVRHVEKIDIKYATRAKRVDVRRLKKDIWKRINLAPTAAEAASGCKSHGGDGGTDGGIRQSSASLPPSGELNFSDVVEDLSAMEEQCSVTLPFYFICLLHLANEKGLRL 465
L GVR VEK+ + YAT AK+VDV++LK D+WK + + + + GD D ++ A PP+ L+F + V+++ A + Q VTLPFYFIC+LHLANEKGLRL
Sbjct: 652 LEGVRKVEKVQVGYATIAKKVDVKKLKTDLWKELESKFSVTKKDD--DTIDGDRSED----ETMAEQPPT-VLSFKEAVQNMEATKSQSDVTLPFYFICILHLANEKGLRL 755 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6003.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6003.2.1 >prot_P-wetherbeei_contig6003.2.1 ID=prot_P-wetherbeei_contig6003.2.1|Name=mRNA_P-wetherbeei_contig6003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp GFEEATGGFTFAVPFEGSGAGAGGYMGPGGDAVDDDSYIAAFGALSGVRHback to top mRNA from alignment at P-wetherbeei_contig6003:2285..3450- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6003.2.1 ID=mRNA_P-wetherbeei_contig6003.2.1|Name=mRNA_P-wetherbeei_contig6003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1166bp|location=Sequence derived from alignment at P-wetherbeei_contig6003:2285..3450- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6003:2285..3450- >mRNA_P-wetherbeei_contig6003.2.1 ID=mRNA_P-wetherbeei_contig6003.2.1|Name=mRNA_P-wetherbeei_contig6003.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig6003:2285..3450- (Phaeothamnion wetherbeei SAG_119_79)back to top |