mRNA_P-wetherbeei_contig600.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A835ZBW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.590e-17 Identity = 60/165 (36.36%), Postives = 83/165 (50.30%), Query Frame = 1
Query: 373 DAKRTFFAWAVPEIRVVAQKGSPGSR-HAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDFFQPEFRGSASEAGDVV 864
DA FAWA+PEIR++ KG S+ +AEYL+V G + +SW+RYSD + A K FA A+ W+ + +R FRC+EP YLR+KSY +E FL++LLF+ +S+ ELL FF E + GDVV
Sbjct: 227 DAAPVCFAWAIPEIRIL--KGPSSSKEYAEYLVVGCLGDTILTSWRRYSDLMEWAEDAKELK----------------------------------FARAVEAWEGVTGGKRIFRCVEPSYLRMKSYNLEHFLQQLLFEVSSYTELLQFFDKEKAQGQNPQGDVV 355
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A7S2A4Z2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4Z2_TRICV) HSP 1 Score: 70.5 bits (171), Expect = 5.570e-10 Identity = 47/142 (33.10%), Postives = 71/142 (50.00%), Query Frame = 1
Query: 448 RHAEYLIVAVNGG--ELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAG----------AMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDFFQPEFRG 837
R+A++L++ G + WKRYSDF++L+ R + + G G S G G AG A+ W LLQK++RWFRCL+ YL LK + +E FL ++LF+++S E L DF + +G
Sbjct: 74 RYAQFLVIYCEGSFRDTVGVWKRYSDFDRLS-----RKITAASGEGCVNVLGKIHPLAIESDENSSHGGSGSDAGVDDEREVLPNAVTSWRLLQKRKRWFRCLDAEYLSLKVFLLERFLHDILFESSSPEMLRDFVGVDPKG 210
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A835YXN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.310e-8 Identity = 40/142 (28.17%), Postives = 64/142 (45.07%), Query Frame = 1
Query: 391 FAWAVPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
FAW + R+V +GS GSRHAE+ ++A G W++W R+++FE+ A A+ + A W ++ + W+RCL YLR K +E +L ++LF A +LL+F
Sbjct: 103 FAWGIGGFRIV--RGSAGSRHAEFQVLARYGDTSWAAWIRWTEFEQKLAEGPAKHWHR----------------------------------AACCWCDVKANQPWYRCLNTEYLRRKCLLLEGYLSQVLFDAPEVNQLLEF 208
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A024UGF3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGF3_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.030e-6 Identity = 42/139 (30.22%), Postives = 65/139 (46.76%), Query Frame = 1
Query: 400 AVPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
++P+ R+V Q + RHAEYL+ G E + W+RYS+F ++ +K +++ F AMA W + RWF LEP YL K +EVFLR+L+++ T + L+DF
Sbjct: 184 SIPKFRIV-QSRAGSDRHAEYLVTFKLGREFHADWRRYSEFAEI---VKKVDVYR-------------------------------FPRAMAAWRKIDN--RWFNRLEPSYLHNKCIALEVFLRDLMYELTVPDVLIDF 285
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A485LEC7_9STRA (Aste57867_19695 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEC7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 3.100e-6 Identity = 42/153 (27.45%), Postives = 65/153 (42.48%), Query Frame = 1
Query: 400 AVPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDFFQPEFRGSASEAGD 858
++P+ R+V Q + RHAEYL+ G E + W+RYS+F ++ L A F AM W + RWF LEP YL K +EVFLR+L+++ T+ + L++F + + D
Sbjct: 176 SIPKFRIV-QSRAGADRHAEYLVTFKLGREYHADWRRYSEFGEIVKKLDAYR----------------------------------FPRAMTSWRGIDN--RWFNRLEPSYLHKKCIALEVFLRDLMYELTAPDVLIEFIGEKINAKPLDMSD 291
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: D7G182_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G182_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 3.610e-6 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 403 VPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
+P+ +++ Q GS HAEYLIV G W+R+S+F++LA+ L RS D F A+ W L++++RWFRCL+ YL LK++ +E FL + +F++ S + +F
Sbjct: 258 IPKFQII-QTGS--DVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLS-----------------------------RSRRRDQ-FHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREF 362
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A6G0X769_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X769_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 8.080e-6 Identity = 44/148 (29.73%), Postives = 66/148 (44.59%), Query Frame = 1
Query: 373 DAKRTFFAWAVPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
AK A ++P+ R+V Q + RHAEYL+ G E + W+RYS+F ++ L A +Q + AM+ W + RWF LEP YL K +EVFLR+L+++ T + L+ F
Sbjct: 137 SAKVQTAAISIPKFRIV-QSRAGSDRHAEYLVTFKLGREYHADWRRYSEFCEIVKKLDA---YQ-------------------------------YPRAMSAWRSIDN--RWFNRLEPSYLHKKCVALEVFLRDLMYELTVPDILIQF 247
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A3R7BK79_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BK79_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.250e-5 Identity = 41/139 (29.50%), Postives = 64/139 (46.04%), Query Frame = 1
Query: 400 AVPEIRVVAQKGSPGSRHAEYLIVAVNGGELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGDGGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
++P+ R+V Q + RHAEYL+ G E + W+R S+F ++ +K +++ F AMA W + RWF LEP YL K +EVFLR+L+++ T + L+DF
Sbjct: 164 SIPKFRIV-QSRAGADRHAEYLVTFKLGREFHADWRRDSEFAEI---IKKVEVYR-------------------------------FPRAMAAWRNIDN--RWFNRLEPSYLHNKCIALEVFLRDLMYELTVPDVLIDF 265
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Match: A0A448ZSQ8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSQ8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.610e-5 Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 448 RHAEYLIVAVNGG--ELWSSWKRYSDFEKLAAGLKARALFQRNAAGSHTGAGGCGXXXXXXXXGRSEPGD-GGFAGAMAVWDLLQKQRRWFRCLEPRYLRLKSYYVEVFLRELLFQATSHEELLDF 816
+HA++L++ G + WKRYSDF++L+ K Q + +E D A+ W LL+K++RW+RCL+ YL LK++ +E FL ++LF++++ + L DF
Sbjct: 549 KHAQFLVIYREGSIRDTIGVWKRYSDFQELS---KKVTKVQESCVS---------VIANMSPLAVTEEHDVEHLPNAITSWHLLKKRKRWYRCLDSGYLSLKTFLLERFLHDILFESSTPDLLRDF 662 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig600.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig600.4.1 >prot_P-wetherbeei_contig600.4.1 ID=prot_P-wetherbeei_contig600.4.1|Name=mRNA_P-wetherbeei_contig600.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=398bp SGPTCAAPAAAAGGEGPQRCVAERSAVFSRGNKEYVVNSTLKILNYLISTback to top mRNA from alignment at P-wetherbeei_contig600:5209..7456- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig600.4.1 ID=mRNA_P-wetherbeei_contig600.4.1|Name=mRNA_P-wetherbeei_contig600.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2248bp|location=Sequence derived from alignment at P-wetherbeei_contig600:5209..7456- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig600:5209..7456- >mRNA_P-wetherbeei_contig600.4.1 ID=mRNA_P-wetherbeei_contig600.4.1|Name=mRNA_P-wetherbeei_contig600.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1194bp|location=Sequence derived from alignment at P-wetherbeei_contig600:5209..7456- (Phaeothamnion wetherbeei SAG_119_79)back to top |