mRNA_P-wetherbeei_contig600.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: D7G4C9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C9_ECTSI) HSP 1 Score: 170 bits (431), Expect = 6.160e-46 Identity = 116/266 (43.61%), Postives = 134/266 (50.38%), Query Frame = 1
Query: 1 MFESPKPNMRDTCERDESGTRPVLEE--GEEVLYECRDVTFALAPDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLD-EDDDVLKEAFFAPSD--ETLLSLLFAAFSRAAELNPDLPEAGGDDFGGGEFGEDELFVGDGDGGGNWGGXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXVGGAGYETYAGGLDGLIVDEAGLAGIGPEQASVLDRLKSVLTIGPG--AQEGQFEDAD 777
MF P P MR CER+E GT PVL+E GEEVL +VT A +P++ EG GSL VT+ RVVWLS KAFDFDV YICLHA+S+DP TFP PCIYCQL E++DVLKEAFFAPSD L LF AFS+AAELNP E G + G GE E GG GL+ D + + EQ VL L SVL + G A GQF+DAD
Sbjct: 1 MFSPPAPMMRQYCERNELGTGPVLDEDEGEEVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNP---EPGDEGAGAGEE------------------------------------------------------------EGLGGGAGGLVFDHG--SALSAEQERVLAHLDSVLVVPEGMEAVNGQFDDAD 201
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A7S3HJ42_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ42_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.260e-23 Identity = 60/126 (47.62%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 64 PVLEEGEEVLYECRDVTFALA-PDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLD-----------EDDDVLKEAFFAPSDETLLSLLFAAFSRAAELNPD 405
P L E E + YE DV + + GSG +VTSKRV+WL + A+DFDVPYI LHA++RDP ++P PCIYCQLD E+ +VL E F APS E L +F A S AA NPD
Sbjct: 24 PELWEDETIDYELNDVELSFGGAKPVIGSGKFIVTSKRVLWLG--VGESAYDFDVPYIALHAITRDPDSYPKPCIYCQLDCEEXXXXXSDEEETEVLDEMFLAPSSEEHLQAMFNALSAAALNNPD 147
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A812X7B4_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X7B4_SYMMI) HSP 1 Score: 101 bits (251), Expect = 5.910e-22 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 82 EEVLYECRDVTFALAPDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDD-----DVLKEAFFAPSDETLLSLLFAAFSRAAELNPD 405
E ++Y V F P+ G+L +TS+RV+W S + A+DFDVPYI LHAV+ DP +FP PC+YCQLD ++ D E +F P+ E L +F AFS+AA LNPD
Sbjct: 2 ETLMYTKEGVDFTFNPETPTIPGTLYITSRRVIW---ASEELAYDFDVPYIVLHAVTHDPSSFPRPCLYCQLDVEEGEGAEDEPTEMYFVPASEGDLQEMFDAFSQAAVLNPD 111
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: W7TSH4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSH4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 9.670e-20 Identity = 60/152 (39.47%), Postives = 86/152 (56.58%), Query Frame = 1
Query: 70 LEEG-EEVLYECRDV--TFALAPDALEGSGSLVVTSKRVVWLSGTSADKA-------------FDFDVPYICLHAVSRDPHTFPLPCIYCQL-----DEDDDVLKEAFFAPSDETLLSLLFAAFSRAAELNPDLPEAGGDDFGGGEFGEDEL 462
+E+G EE+L+E DV ++ + E G L +TSKR+ W + D+ ++ ++P I LHA+S+DP +FP PC+YCQ+ DED+D KE +F P D L LF A SRAA +NPD PEAG ++ G+DEL
Sbjct: 1 MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENE------GDDEL 146
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: F0WL16_9STRA (Uncharacterized protein AlNc14C139G7205 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL16_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.010e-18 Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 46 DESGTRPVLE---------EGEEVLYECRDVTFAL-------APDALEGSGSLVVTSKRVVWLSGTSAD--KAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDDDVLKEAFFAPSDETLLSLLFAAFSRAAELNPD---LPEAGGDDFGGGEFGEDEL 462
D++GT P+L+ E E VL +DV ++ +++ G + VT++R +W+S TS+D + + +D+ I LHA+SRDP FP+PC+YCQ++ +D E F PS L+ L+ AFS++AE+NPD +PE G++ G + EDE+
Sbjct: 10 DDNGT-PILDAETLQEEHIEPEIVLDTFQDVELSINLFSSKPVDESVLNKGKVYVTTRRAIWISNTSSDTSRGYSWDIKCITLHAISRDPAAFPVPCLYCQIEAED--ATEVRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPEGAGEE-GNWIYDEDEI 165
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A024GHY1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHY1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.810e-18 Identity = 61/160 (38.12%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 46 DESGTRPVLEEG---------EEVLYECRDVTFALAPDA---LEGS----GSLVVTSKRVVWLSGTSAD--KAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDDDVLKEAFFAPSDETLLSLLFAAFSRAAELNPD---LPEAGGDDFGGGEFGEDEL 462
D++G +P+L+ G E VL DV A+ ++ +EGS G + VTS+R VW++ TS D + + +D+ I LHA+SRDP FP+PC+YCQ++ ++ E F PS L+ L+ AFS++AE+NPD +PE G++ G + EDE+
Sbjct: 10 DDNG-KPILDTGSLQEGNVEPEIVLDTFDDVKLAICTNSCKPVEGSELSEGKVYVTSRRAVWIANTSTDAFRGYSWDIKCITLHAISRDPTAFPVPCLYCQIEAEN--ATEMRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPEGAGEE-GDWIYDEDEI 165
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: ICLN_ARATH (Chloride conductance regulatory protein ICln n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=ICLN_ARATH) HSP 1 Score: 92.4 bits (228), Expect = 1.360e-17 Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 25 MRDTCERDESGT-RPVLEE--GEEVLYECRDVTFALAPDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDDDV----------------LKEAFFAPSDETLLSLLFAAFSRAAELNPD 405
+RD R E G+ +PVL+E GEE+++ V AL +E G+L +TS++++WLS K + D I LHAVSRDP + PCIY Q++ ++D ++E PSD T L LF F AELNP+
Sbjct: 5 LRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIWLSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDXXXXXXXXSTEVLDLSKIREMRLVPSDSTQLETLFDVFCECAELNPE 150
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A6S7PGD5_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7PGD5_LACSI) HSP 1 Score: 92.0 bits (227), Expect = 1.670e-17 Identity = 54/133 (40.60%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 64 PVLE--EGEEVLYECRDVTFALAPDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDDDV-----------------LKEAFFAPSDETLLSLLFAAFSRAAELNPD 405
PVL+ GEE+++ +V+ L SG+L +T+K+VVWLS T K + D + LHAVSRDP F PCIY QLD D+D +KE PSD T L LF F AELNP+
Sbjct: 20 PVLDTDNGEELMHVQPNVSIVLGNRPPYSSGTLYITTKKVVWLSDTERTKGYAVDFLSVSLHAVSRDPEAFESPCIYTQLDTDEDYESESYHSESNETLDLSKIKEMRLVPSDPTQLDTLFRIFCECAELNPE 152
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A8J5FS89_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FS89_ZINOF) HSP 1 Score: 92.0 bits (227), Expect = 1.890e-17 Identity = 60/154 (38.96%), Postives = 84/154 (54.55%), Query Frame = 1
Query: 61 RPVLE--EGEEVLYECRDVTFALAPDALEGSGSLVVTSKRVVWLSGTSADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQL---DED-----------DDV----LKEAFFAPSDETLLSLLFAAFSRAAELNPDLPEAGGDDFGGGEFGEDEL 462
RP+LE +GEE+++ V AL +E G+L VTS+RV+WLS +K + D + LHAVSRDP T+P PCIY Q+ DED DD+ + E PSD L LF F + AELNP+ P G++ FG++++
Sbjct: 18 RPLLESDDGEELMHVEPGVAVALGSRPMESPGTLYVTSRRVIWLSDADKEKGYAVDFLSLSLHAVSRDPETYPFPCIYTQIEIGDEDXXXXXXXXXXNDDLELSKVTEMRLLPSDAGKLDTLFDIFCQCAELNPE-PHQEGEEENTWFFGDEKI 170
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Match: A0A067D7X7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7X7_SAPPC) HSP 1 Score: 90.9 bits (224), Expect = 2.290e-17 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 139 EGSGSLVVTSKRVVWLSGTS--ADKAFDFDVPYICLHAVSRDPHTFPLPCIYCQLDEDDDVLKEAFFAPSDET-LLSLLFAAFSRAAELNPDLPEAGGDDFGGGEFGEDELFVG 471
+G+G+LVVT+KRVVW++ A+ + +D+ Y+ LHA+SRD +FP PC+YC LD +DDV +E F P D + L +F AFS +A LNPD E D+ G + EDE+ G
Sbjct: 48 KGAGNLVVTTKRVVWITSQPGMAEVGYAWDMRYLSLHAISRDTSSFPEPCLYCHLDVEDDV-QEVRFVPDDSSKTLQAMFDAFSASAALNPDDDED--DEEGEWIYNEDEVEAG 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig600.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig600.1.2 >prot_P-wetherbeei_contig600.1.2 ID=prot_P-wetherbeei_contig600.1.2|Name=mRNA_P-wetherbeei_contig600.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MFESPKPNMRDTCERDESGTRPVLEEGEEVLYECRDVTFALAPDALEGSGback to top mRNA from alignment at P-wetherbeei_contig600:2288..4199+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig600.1.2 ID=mRNA_P-wetherbeei_contig600.1.2|Name=mRNA_P-wetherbeei_contig600.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1912bp|location=Sequence derived from alignment at P-wetherbeei_contig600:2288..4199+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig600:2288..4199+ >mRNA_P-wetherbeei_contig600.1.2 ID=mRNA_P-wetherbeei_contig600.1.2|Name=mRNA_P-wetherbeei_contig600.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig600:2288..4199+ (Phaeothamnion wetherbeei SAG_119_79)back to top |