mRNA_P-wetherbeei_contig5964.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5964.1.1
Unique NamemRNA_P-wetherbeei_contig5964.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A1F3A8B9_9PROT (ABC transporter ATP-binding protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A8B9_9PROT)

HSP 1 Score: 427 bits (1097), Expect = 6.830e-150
Identity = 227/244 (93.03%), Postives = 231/244 (94.67%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEE 744
            LL T  LVKRFGGLVATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG+LAPDAGTI F GRDVTRLPTHARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLADAR DERLR PAR GLEAVGLGARADTLAA LSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQ MIGFL+ALK KRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPD IRANAEVRQAYLG+E
Sbjct:    5 LLSTDRLVKRFGGLVATDTVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNLAPDAGTIRFDGRDVTRLPTHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADARYDERLRAPARRGLEAVGLGARADTLAATLSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQRMIGFLQALKGKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDEIRANAEVRQAYLGDE 248          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A259MM61_9PROT (ABC transporter ATP-binding protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MM61_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 4.390e-143
Identity = 214/244 (87.70%), Postives = 225/244 (92.21%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEE 744
            LL T GLVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTL+ QLTG +APD+G IHFAGRDVTRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLADARRDE LRGPAR  LE VGLG RADTLAA+LSHGEQRQLEIAMALAGDP+LLLLDEPMAGMGAEESQ +IGFL+ALK   A+LLIEHDMDAVFQLADRITVLVYGRAIASGTPD IRAN +VRQAYLGEE
Sbjct:    5 LLRTEGLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLIHQLTGVVAPDSGAIHFAGRDVTRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDESLRGPARRLLEEVGLGERADTLAASLSHGEQRQLEIAMALAGDPRLLLLDEPMAGMGAEESQRLIGFLQALKQNHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANPDVRQAYLGEE 248          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A1H8W5T2_9PROT (Branched-chain amino acid transport system ATP-binding protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W5T2_9PROT)

HSP 1 Score: 403 bits (1035), Expect = 1.710e-140
Identity = 209/243 (86.01%), Postives = 221/243 (90.95%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGE 741
            +L   GL+KRFGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG++ PD GTIHFAGRD+T LP HARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLAD RRDE LRGPAR GLE VGL ARADT AA LSHGEQRQLEIAMALAGDP++LLLDEPMAGMG EESQ MIGFL+ LK +R +LLIEHDMDAVFQLADRITVLVYGRAIASGTP  IRANAEVRQAYLGE
Sbjct:    5 MLAASGLIKRFGGLIATDNVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNMQPDTGTIHFAGRDITHLPMHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADVRRDESLRGPARRGLEEVGLAARADTPAANLSHGEQRQLEIAMALAGDPRMLLLDEPMAGMGVEESQRMIGFLQGLKDRRGMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANAEVRQAYLGE 247          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: UPI001E3D4A59 (ABC transporter ATP-binding protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E3D4A59)

HSP 1 Score: 401 bits (1030), Expect = 9.860e-140
Identity = 210/250 (84.00%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 LRTALLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEEVA 750
            ++  LL T  LVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG +APD+GTIHFAG D+TRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLADARRDE LR PAR  L+ VGLGAR   LA+ALSHGEQRQLE+AMALAGDP +LLLDEPMAGMG EESQ +IGFLRALK K A+LLIEHDMDAVFQLADRITVLVYGRAIASGTP  IRANAEVRQAYLGEE+A
Sbjct:    1 MKEPLLRTERLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLVHQLTGVVAPDSGTIHFAGHDITRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDETLRAPARRLLDEVGLGARGSVLASALSHGEQRQLELAMALAGDPTVLLLDEPMAGMGVEESQRLIGFLRALKQKHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPGEIRANAEVRQAYLGEEMA 250          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A521QHV5_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QHV5_9HYPH)

HSP 1 Score: 400 bits (1027), Expect = 3.500e-139
Identity = 211/244 (86.48%), Postives = 222/244 (90.98%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEE 744
            LL T  LVKRFGGL+ATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG+D+TRLPTH RV LGLARSFQITSVLREFTALENVALAVQAH GHSFRFLADAR DE LRGPAR GLE VGLG RA+TLAAALSHGEQRQLEIAMALAGDP LLLLDEPMAGMG EESQ MIGFLRALKSKRA+LLIEHDMDAVFQLADRITVLVYGRAIASGTP  IRAN +VRQAYLG++
Sbjct:    9 LLSTDRLVKRFGGLLATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGQDITRLPTHKRVHLGLARSFQITSVLREFTALENVALAVQAHVGHSFRFLADARNDESLRGPARRGLEEVGLGDRANTLAAALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIGFLRALKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANKDVRQAYLGDD 252          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A521L1E4_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1E4_9HYPH)

HSP 1 Score: 393 bits (1010), Expect = 1.100e-136
Identity = 211/246 (85.77%), Postives = 220/246 (89.43%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEEVA 750
            LL T  LVKR+GGLVATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG DVTRL THARV LGLARSFQITSVLREFTALENVALAVQAHAGHSFRFL DAR DE LRGPAR  LE VGLG+RAD  AAALSHGEQRQLEIAMALAGDP+LLLLDEPMAGMGAEESQ MIGFLRALK +RA+LLIEHDMDAVFQLADRITVLVYGRAIASG P  IRAN +VRQAYLGEE A
Sbjct:    5 LLSTDRLVKRYGGLVATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGHDVTRLKTHARVALGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLRDARSDESLRGPARTLLEEVGLGSRADAPAAALSHGEQRQLEIAMALAGDPQLLLLDEPMAGMGAEESQRMIGFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGPPAEIRANPDVRQAYLGEETA 250          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A1T4RLQ5_9HYPH (Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLQ5_9HYPH)

HSP 1 Score: 388 bits (996), Expect = 1.490e-134
Identity = 204/246 (82.93%), Postives = 222/246 (90.24%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEEVA 750
            LL  +GLVKRFGGL+ATD VSI+V PGEIHALIGPNGAGKTTLVSQLTG+L PD+G+I FAGRDVTRLP HARVRLGLARSFQIT+VLR+FTAL+NVALAVQAH GHSFRFLAD R D RLR  AR GLEAVGL ARA+TLA+ALSHGEQRQLEIAMALAG+P+LLLLDEPMAGMG EESQ ++G LR LKS+  +LLIEHDMDAVF LADRITVLVYGRAIASGTPD IR NA+VRQAYLGEEVA
Sbjct:    5 LLSAQGLVKRFGGLLATDNVSIEVMPGEIHALIGPNGAGKTTLVSQLTGNLRPDSGSIRFAGRDVTRLPLHARVRLGLARSFQITAVLRDFTALDNVALAVQAHDGHSFRFLADVRADRRLRDSARRGLEAVGLQARAETLASALSHGEQRQLEIAMALAGEPRLLLLDEPMAGMGPEESQRLVGMLRNLKSRCGMLLIEHDMDAVFALADRITVLVYGRAIASGTPDQIRGNAQVRQAYLGEEVA 250          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A1Q3KQ47_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KQ47_9PROT)

HSP 1 Score: 372 bits (954), Expect = 3.960e-128
Identity = 199/244 (81.56%), Postives = 213/244 (87.30%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEE 744
            LL T  LVKR+GGL+ATD VSIDV  GEIHALIGPNGAGKTTLV QLTG++APD+GTI FAG+D+TRLPTH RV LGLARSFQITSVL EFTALENVALAVQAHAGHSFRFL D R DE LRGPAR  LE VGL ARA   A+ALSHGEQRQLEIAMALAGDP LLLLDEPMAGMG EESQ MI FLRALK +RA+LLIEHDMDAVFQLADRITVLVYGRAIASGTP  IRA+  VR+AYLG++
Sbjct:    5 LLSTDRLVKRYGGLLATDNVSIDVASGEIHALIGPNGAGKTTLVGQLTGNVAPDSGTIRFAGQDITRLPTHRRVHLGLARSFQITSVLGEFTALENVALAVQAHAGHSFRFLRDVRGDESLRGPARHCLEEVGLDARAGMPASALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIAFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRADEAVRRAYLGDD 248          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A537MS68_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MS68_9PROT)

HSP 1 Score: 365 bits (936), Expect = 2.030e-125
Identity = 196/246 (79.67%), Postives = 209/246 (84.96%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEEVA 750
            LL T  LVK FGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG LAPD+GTI FAGRD+TRLPTHARVRLGL RSFQITSVLREF+AL+NVALAVQAH GHSFRFLAD RRD  LR  A+ GL+AVGLGARA   AAALSHGEQRQLEIAMALAG+PKLLLLDEP AGMG EESQ M+  LR LK    +LLIEHDMDAVF LADRITVLVYGR +  GTPD IR + EVRQAYLGE+ A
Sbjct:    5 LLSTDRLVKHFGGLLATDDVSIDVRPGEIHALIGPNGAGKTTLVGQLTGLLAPDSGTIRFAGRDITRLPTHARVRLGLGRSFQITSVLREFSALDNVALAVQAHQGHSFRFLADVRRDRALRTAAQGGLDAVGLGARAAMPAAALSHGEQRQLEIAMALAGEPKLLLLDEPTAGMGVEESQRMVETLRGLKRSCGMLLIEHDMDAVFALADRITVLVYGRVLFCGTPDEIRRHPEVRQAYLGEDGA 250          
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Match: A0A5C5SA16_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SA16_9HYPH)

HSP 1 Score: 340 bits (873), Expect = 7.050e-116
Identity = 181/243 (74.49%), Postives = 200/243 (82.30%), Query Frame = 1
Query:   13 LLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGE 741
            +L+  GLVKRFGGLVATD +S+DVR GE+HALIGPNGAGKTTL++QL+G L PDAG I F  RD+T LP  ARVRLGLARSFQITSVLR+FTAL+NVALA QA  GHSFRF   AR D  LRGPA   LEAVGL  RAD  AA+LSHGEQRQLE+AMALA DP+LLLLDEPMAGMG EES  M+  LR L+ +R +LLIEHDMDAVF LADRITVLVYGRAIA+GTP  IRAN EVR AYLGE
Sbjct:    1 MLKVEGLVKRFGGLVATDNLSLDVRDGEVHALIGPNGAGKTTLIAQLSGFLRPDAGRITFTDRDITALPAAARVRLGLARSFQITSVLRDFTALDNVALAEQARQGHSFRFWQPARSDRSLRGPASAALEAVGLAHRADDPAASLSHGEQRQLEVAMALACDPRLLLLDEPMAGMGPEESARMVDLLRGLRGQRTMLLIEHDMDAVFALADRITVLVYGRAIATGTPAEIRANPEVRTAYLGE 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5964.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3A8B9_9PROT6.830e-15093.03ABC transporter ATP-binding protein n=2 Tax=Alphap... [more]
A0A259MM61_9PROT4.390e-14387.70ABC transporter ATP-binding protein n=4 Tax=Alphap... [more]
A0A1H8W5T2_9PROT1.710e-14086.01Branched-chain amino acid transport system ATP-bin... [more]
UPI001E3D4A599.860e-14084.00ABC transporter ATP-binding protein n=1 Tax=Reyran... [more]
A0A521QHV5_9HYPH3.500e-13986.48ABC transporter ATP-binding protein n=2 Tax=Reyran... [more]
A0A521L1E4_9HYPH1.100e-13685.77ABC transporter ATP-binding protein n=1 Tax=Reyran... [more]
A0A1T4RLQ5_9HYPH1.490e-13482.93Branched-chain amino acid transport system ATP-bin... [more]
A0A1Q3KQ47_9PROT3.960e-12881.56ABC transporter ATP-binding protein n=1 Tax=Alphap... [more]
A0A537MS68_9PROT2.030e-12579.67ABC transporter ATP-binding protein n=1 Tax=Alphap... [more]
A0A5C5SA16_9HYPH7.050e-11674.49ABC transporter ATP-binding protein n=2 Tax=Reyran... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5964contigP-wetherbeei_contig5964:458..1210 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000002_gene2985
PFAMsABC_tran,BCA_ABC_TP_C
Model size753
Max annot lvl204441|Rhodospirillales
KEGG koko:K01995
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.01e-141
EggNOG OGsCOG0411@1|root,COG0411@2|Bacteria,1MXHT@1224|Proteobacteria,2TSWS@28211|Alphaproteobacteria,2JQJ2@204441|Rhodospirillales
DescriptionCOG0411 ABC-type branched-chain amino acid transport systems, ATPase component
Cds size753
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186878.4280574-CDS-P-wetherbeei_contig5964:457..12101683186878.4280574-CDS-P-wetherbeei_contig5964:457..1210Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5964 458..1210 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5964.1.1prot_P-wetherbeei_contig5964.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5964 458..1210 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5964.1.1

>prot_P-wetherbeei_contig5964.1.1 ID=prot_P-wetherbeei_contig5964.1.1|Name=mRNA_P-wetherbeei_contig5964.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
LRTALLETRGLVKRFGGLVATDAVSIDVRPGEIHALIGPNGAGKTTLVSQ
LTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALEN
VALAVQAHAGHSFRFLADARRDERLRGPARLGLEAVGLGARADTLAAALS
HGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQHMIGFLRALKSKRAI
LLIEHDMDAVFQLADRITVLVYGRAIASGTPDAIRANAEVRQAYLGEEVA
*
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mRNA from alignment at P-wetherbeei_contig5964:458..1210-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5964.1.1 ID=mRNA_P-wetherbeei_contig5964.1.1|Name=mRNA_P-wetherbeei_contig5964.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig5964:458..1210- (Phaeothamnion wetherbeei SAG_119_79)
CTTCGCACGGCCCTCTTGGAAACCAGGGGGCTGGTCAAGCGCTTCGGCGG GCTGGTCGCCACCGACGCGGTCTCGATCGACGTCCGGCCGGGCGAGATCC ATGCCCTGATCGGCCCCAACGGTGCCGGCAAGACAACGCTGGTCAGCCAG CTTACCGGCAGCCTGGCGCCCGATGCCGGCACCATCCACTTCGCCGGCCG CGACGTGACGCGCCTGCCAACCCATGCCCGCGTCCGCCTGGGTCTGGCGC GTTCGTTCCAGATCACGTCGGTGCTGCGCGAGTTCACCGCGCTGGAGAAT GTGGCTTTGGCGGTCCAGGCGCACGCCGGCCACTCGTTCCGGTTCCTGGC CGATGCACGTCGCGACGAACGCCTGCGCGGCCCCGCCCGGCTTGGCCTCG AAGCGGTGGGGCTGGGCGCGCGCGCCGATACGCTGGCCGCCGCTCTCAGC CACGGCGAGCAGCGCCAGCTCGAGATTGCGATGGCCCTGGCGGGCGATCC GAAACTGCTGCTGCTCGACGAACCGATGGCCGGCATGGGGGCTGAGGAGT CGCAGCACATGATCGGCTTCCTGCGCGCGCTCAAGTCCAAGCGCGCCATA CTCCTGATCGAGCACGACATGGATGCCGTATTCCAGCTCGCCGACCGCAT CACCGTGCTGGTCTATGGCCGCGCCATTGCCAGCGGCACGCCCGACGCGA TCCGCGCCAACGCCGAGGTCCGCCAGGCCTATCTCGGCGAGGAGGTCGCC TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5964:458..1210-

>mRNA_P-wetherbeei_contig5964.1.1 ID=mRNA_P-wetherbeei_contig5964.1.1|Name=mRNA_P-wetherbeei_contig5964.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig5964:458..1210- (Phaeothamnion wetherbeei SAG_119_79)
CTTCGCACGGCCCTCTTGGAAACCAGGGGGCTGGTCAAGCGCTTCGGCGG
GCTGGTCGCCACCGACGCGGTCTCGATCGACGTCCGGCCGGGCGAGATCC
ATGCCCTGATCGGCCCCAACGGTGCCGGCAAGACAACGCTGGTCAGCCAG
CTTACCGGCAGCCTGGCGCCCGATGCCGGCACCATCCACTTCGCCGGCCG
CGACGTGACGCGCCTGCCAACCCATGCCCGCGTCCGCCTGGGTCTGGCGC
GTTCGTTCCAGATCACGTCGGTGCTGCGCGAGTTCACCGCGCTGGAGAAT
GTGGCTTTGGCGGTCCAGGCGCACGCCGGCCACTCGTTCCGGTTCCTGGC
CGATGCACGTCGCGACGAACGCCTGCGCGGCCCCGCCCGGCTTGGCCTCG
AAGCGGTGGGGCTGGGCGCGCGCGCCGATACGCTGGCCGCCGCTCTCAGC
CACGGCGAGCAGCGCCAGCTCGAGATTGCGATGGCCCTGGCGGGCGATCC
GAAACTGCTGCTGCTCGACGAACCGATGGCCGGCATGGGGGCTGAGGAGT
CGCAGCACATGATCGGCTTCCTGCGCGCGCTCAAGTCCAAGCGCGCCATA
CTCCTGATCGAGCACGACATGGATGCCGTATTCCAGCTCGCCGACCGCAT
CACCGTGCTGGTCTATGGCCGCGCCATTGCCAGCGGCACGCCCGACGCGA
TCCGCGCCAACGCCGAGGTCCGCCAGGCCTATCTCGGCGAGGAGGTCGCC
TGA
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