mRNA_P-wetherbeei_contig595.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A835YZN2_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN2_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.180e-82 Identity = 135/264 (51.14%), Postives = 179/264 (67.80%), Query Frame = 2
Query: 164 SSEIVRRKSEEIVLRPLTAPKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAA---AYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLP-IEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQPPFEEDRDDVSLVSVS 943
+ +VR +E+ + APKL+TFDAEGTL+QL +P+GL RE+LL+AH Y RLPGP F+ + AA A AA PCYGCG GV+SHQWWY V+ E N+P E++ V +ELFD+LFYE F GPEA+EL LE+L WR++G GP+LG+++NADERL T+L NLGIL+ FDFV+TSR+IG E P+R +FDVAL +AG+T EALHCG+DL D+ A AGWQ+C I PP + +++ +S
Sbjct: 6 AGRLVRAGVQELAVPLPPAPKLITFDAEGTLLQLASPKGLILRESLLKAHGYLARLPGPDLFQASHAAYDKALNAATAAQPCYGCGTGVTSHQWWYGVVYDALVETLEAHNIPPSEMVDPVMEELFDELFYETFTGPEAYELRPDAARTLEKLAEWREAGTGPLLGIVTNADERLPTVLLNLGILEVFDFVLTSRQIGSELPARAIFDVALDKAGLTNAAEALHCGDDLERDIGGAAAAGWQSCLIANPPAPQGPQAYTVMGIS 269
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.850e-62 Identity = 111/251 (44.22%), Postives = 159/251 (63.35%), Query Frame = 2
Query: 158 ASSSEIVRRKSEEIVLRP--LTAPKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQPPF 904
A +SEI+ VL P P+L+TFDA GTLIQL P G+ YR+ L++ +RLP P F DAF Y A + SPC+GC +S+ WW +V++ Y +V +P +++ + LFD+L++EVF G + WEL +VL++L+ W+++G+GP LGV+SN DERL +L+ LGI DYFD ++TS+E G EKP RQ+FD+ALTR GI A+H GND DV A AGW A ++++P +
Sbjct: 68 AGASEIMLTSEPAGVLPPPITQKPQLITFDATGTLIQLAEPVGMHYRQVLMKHTG--IRLPRPDIFTDAFKEVYDAKCQASPCFGCSDSISAQDWWASVVRDTYTKV----GVPSDIIDPLFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEWQETGDGPRLGVISNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYERDAAVHVGNDYDTDVKGATAAGWNALYVKEPAY 312
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 191 bits (485), Expect = 4.000e-51 Identity = 103/234 (44.02%), Postives = 141/234 (60.26%), Query Frame = 2
Query: 212 LTAPKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSG--EGPV-LGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQPPF 904
+ P+++TFDA GTL+QLT P G+ YREALL+A +RLP P F+ AF Y A PC+GCG + S WWY V++ Y + +P ++L + E+FD L+ VFAG E WEL VL+ L ++S + P+ LGV+SN DERL +LDNLGI YFD V+TS+E EKP+ +FD+AL+R GI A+H G+ DV A AGW A ++ PP+
Sbjct: 98 ILTPRVVTFDATGTLMQLTEPVGMHYREALLQASG--LRLPSPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKT----GVPEKILDPLLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRSRAVHIGDTFDKDVAGAARAGWNAIFVRAPPY 325
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.110e-48 Identity = 102/234 (43.59%), Postives = 137/234 (58.55%), Query Frame = 2
Query: 221 PKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCE---EFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQPPFEED 913
P+L+TFDA TLIQL + G+ YR L A ++ RLP P F AF A+ PC+GCG G++S +WW ++ YA V E L + + D + + L+ +VFA EAWEL L R + WR+ G GP L VLSN DERL +ILD +G+ D FDFV+TSREIG EKP+R F+VA++RAG+ P +H G+ DV+ A +AGW + I PP D
Sbjct: 89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRFRSRLPTPAVFTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMWREEG-GPQLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPSLCMHVGDGFDSDVVGASNAGWHSVWI--PPINGD 319
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: D8LIY6_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY6_ECTSI) HSP 1 Score: 183 bits (465), Expect = 4.340e-48 Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 2
Query: 221 PKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQ 895
P+L+TF A G L P GL REAL R+H Y R+P P AF+ F ++ A PCYG +SS WW++V Y + EF + +++ + DEL D+L+YE+ GPEA+E+ VVL+RL AWRD+ GP L V+++ D+RL +L+NLG+L YFDFV+TSRE G E M+++AL AG+ ++ LH G D+ + + G +A +++
Sbjct: 105 PELVTFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSVKR 329
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A6H5JZ79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ79_9PHAE) HSP 1 Score: 184 bits (468), Expect = 2.680e-47 Identity = 91/225 (40.44%), Postives = 136/225 (60.44%), Query Frame = 2
Query: 221 PKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQ 895
P+L+TF A G L P GL REAL R+H Y R+P P AF+ F ++ A PCYG +SS WW++V Y + EF + +++ + D+L D+L+YE+ GPEA+E+ VVL+RL AWRD+ GP L V+++ D+RL +L+NLG+L YFDFV+TSRE G E M+++AL AG+ ++ LH G D+ + +AG +A +++
Sbjct: 239 PELITFSAYGVLYNWHLPMGLLMREALGRSHNYVHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKQAKKGLHVGCKYETDITGSCEAGMEAVSVKR 463
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.830e-47 Identity = 113/251 (45.02%), Postives = 143/251 (56.97%), Query Frame = 2
Query: 194 EIVLRPLTAPKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTE---------VQDELFDDLFYEVFA-GPEA--WELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVP-------REALHCGNDLMLDVLAAKDAGWQACHI 889
E+V PKL+TFDA GTL+QL + G+ YR+ LL H +RLP P F AF AYA+ + PC+GCG G++S WW VMQ Y V F + E + E V + LF DL++ +FA GP WEL VL+ LR+ G G LGVLSN D+RL IL++LGI YFDFV+TSRE G EKPS+ MFD+A G++ RE LH G+ L DV A DAGWQ+ I
Sbjct: 269 EMVPTAKPRPKLITFDATGTLMQLRSHIGVIYRDTLLE-HATTLRLPRPDVFSIAFKEAYASQCKAMPCFGCGSGIASFDWWRPVMQGTYDSVFSSFGVTDEEVAEAGGMESKEEVMEMLFQDLYFNIFAKGPPEGMWELRPGVEAVLQNLRSAESCG-GLRLGVLSNFDDRLPGILESLGIAKYFDFVLTSREAGQEKPSQVMFDLARNALGLSADGSGPIETRECLHAGDTLGTDVRGALDAGWQSAFI 517
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: W7TTJ7_9STRA (Haloacid dehalogenase-like hydrolase domain containing 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ7_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.470e-39 Identity = 93/253 (36.76%), Postives = 140/253 (55.34%), Query Frame = 2
Query: 149 EAFASSSEIVRRKSEEIVLRPLTAPKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITVPREALHCGNDLMLDVLAAKDAGWQACHIQQPPFE 907
E A S + E +RP+ P+L+T +A G LI+ T GL +RE ++ + Y VRLP P+ F AF AY A P +G G+S+ +WW + + + V P E L EV +F++L+YE AWE ++++L+ WR G GP LGV+ + DERL+TIL+NL IL YFD VV+SRE G KP + F +A+ +AG+ P++ +H G + DV+ A AG + + P ++
Sbjct: 92 EEEAEESTLAGEAVEAPPVRPV--PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDV----GFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQG-GPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYD 337
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A7S2RCE0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RCE0_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.060e-32 Identity = 76/182 (41.76%), Postives = 105/182 (57.69%), Query Frame = 2
Query: 218 APKLLTFDAEGTLIQLTAPRGLQYREALLRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARV-CEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDSGEGPV-LGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKP 757
+PKL+T DA LIQ A G +R+ L A Y RL P+ + AF AY + PC+G G++S QWW V Q+ YA V E L E+ + +++FD LF++VF EAWE+ L ++ WR+ +GP+ L +LSN DERL IL+ L ++D FDFV+TSREIG P
Sbjct: 64 SPKLITIDAFDILIQTRAEMGWFFRDVLHEATDYNARLVAPEHYTKAFHTAYKEVDDDMPCFGVKDGITSRQWWKIVTQKTYAYVDLTEPGLREELDEWLLEDVFDVLFHDVFMTEEAWEIKPGALEALSYMKKWREEEQGPMALAILSNYDERLHAILEQLDLIDAFDFVLTSREIGSPMP 245
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 137 bits (345), Expect = 3.820e-32 Identity = 91/246 (36.99%), Postives = 125/246 (50.81%), Query Frame = 2
Query: 215 TAPKLLTFDAEGTLIQLTAPRGLQYREAL--------------LRAHKYYVRLPGPQAFEDAFAAAYAAAERTSPCYGCGRGVSSHQWWYNVMQQMYARVCEEFNLPIEVLTEVQDELFDDLFYEVFAGPEAWELTRHCGVVLERLRAWRDS---GEGPVLGVLSNADERLVTILDNLGILDYFDFVVTSREIGCEKPSRQMFDVALTRAGITV----PREALHCGNDLMLDVLAAKDAGWQACHI 889
T P+L+TFDA GTL+++ P G YR+AL L A + P A AF AYAA PC+G G +SS WW +V+++ + E + + L YE FA WEL V+++L WR GE +GV+SN D+RL +L++LG+ YFDFV+TSRE G EKP R +F+ A RAG+ PR +H G+ DVL A AGW+A +
Sbjct: 8 TRPRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAG-SLSSRDWWSSVVREAFVGAGVS-----EAVVRAEMPLLFPTLYESFASTATWELLDASAGVVQQLARWRAQLPPGE-LTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFV 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig595.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig595.3.3 >prot_P-wetherbeei_contig595.3.3 ID=prot_P-wetherbeei_contig595.3.3|Name=mRNA_P-wetherbeei_contig595.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp MADREAFASSSEIVRRKSEEIVLRPLTAPKLLTFDAEGTLIQLTAPRGLQback to top mRNA from alignment at P-wetherbeei_contig595:2702..5876- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig595.3.3 ID=mRNA_P-wetherbeei_contig595.3.3|Name=mRNA_P-wetherbeei_contig595.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3175bp|location=Sequence derived from alignment at P-wetherbeei_contig595:2702..5876- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig595:2702..5876- >mRNA_P-wetherbeei_contig595.3.3 ID=mRNA_P-wetherbeei_contig595.3.3|Name=mRNA_P-wetherbeei_contig595.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig595:2702..5876- (Phaeothamnion wetherbeei SAG_119_79)back to top |