mRNA_P-wetherbeei_contig59283.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59283.1.1
Unique NamemRNA_P-wetherbeei_contig59283.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A523P265_9PROT (Hydantoinase/oxoprolinase family protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P265_9PROT)

HSP 1 Score: 313 bits (802), Expect = 1.170e-100
Identity = 148/166 (89.16%), Postives = 156/166 (93.98%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            GMS+LEV LR NGY RPMLLVHNTSGMAQ+NSTH+LQTIHSGP+AGLEAT YL+ QF EPN+IATDMGGTSFDIGLVTADGVKFYDFNPVIDRWL+STPMTYLHTLGAGGGSIARYDRLW AVEVGP+SAGSDPGPACY RGGK PTTTDANLVLGYLD ENYAGG
Sbjct:  234 GMSSLEVVLRQNGYTRPMLLVHNTSGMAQMNSTHALQTIHSGPIAGLEATNYLSKQFAEPNIIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLISTPMTYLHTLGAGGGSIARYDRLWEAVEVGPESAGSDPGPACYGRGGKQPTTTDANLVLGYLDPENYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A257DFP0_9BURK (Hydantoinase n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DFP0_9BURK)

HSP 1 Score: 308 bits (789), Expect = 1.430e-98
Identity = 144/166 (86.75%), Postives = 157/166 (94.58%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            GMSTLE+ALR  GY +PMLLVHNTSGMAQ+NST SLQTIHSGPVAGLEAT YL+ +FK+PN+IATDMGGTSFDIGLVTADGVKFYDFNP+I+RWLVSTPMTYLHTLGAGGGSIAR+DR+W A+EVGP SAGSDPGPACY RGGKLPTTTDANLVLGYLDE+NYAGG
Sbjct:  234 GMSTLEIALRRAGYKKPMLLVHNTSGMAQMNSTSSLQTIHSGPVAGLEATNYLSSEFKQPNLIATDMGGTSFDIGLVTADGVKFYDFNPIIERWLVSTPMTYLHTLGAGGGSIARFDRMWNAIEVGPQSAGSDPGPACYGRGGKLPTTTDANLVLGYLDEKNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: UPI00068AB758 (hydantoinase/oxoprolinase family protein n=1 Tax=Thiomonas sp. FB-Cd TaxID=1158292 RepID=UPI00068AB758)

HSP 1 Score: 307 bits (786), Expect = 4.000e-98
Identity = 145/166 (87.35%), Postives = 156/166 (93.98%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            GM+TLE+ALR  GY +PMLLVHNTSGMAQ+NST SLQTIHSGPVAGLEAT YL+ +F +PN+IATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDR+W A+EVGP SAGSDPGPACY RGGKLPTTTDANLVLGYLDE+NYAGG
Sbjct:  234 GMATLEIALRRAGYKKPMLLVHNTSGMAQMNSTSSLQTIHSGPVAGLEATNYLSKKFDQPNLIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRMWNAIEVGPQSAGSDPGPACYGRGGKLPTTTDANLVLGYLDEKNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: UPI001F4974C3 (hydantoinase/oxoprolinase family protein n=1 Tax=Candidatus Frankia datiscae TaxID=2716812 RepID=UPI001F4974C3)

HSP 1 Score: 299 bits (766), Expect = 2.060e-97
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE+ LR NGY +PMLLVHNT GMAQLNST SLQTIHSGPVAGLEAT YL+  + +PN+IATDMGGTSFDIGLVT+DGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGA+EVGP SAGSDPGPACY RGG+LPTTTD NLVLGYLD +NYAGG
Sbjct:  234 GLASLEIELRRNGYTKPMLLVHNTGGMAQLNSTASLQTIHSGPVAGLEATHYLSKTYDQPNLIATDMGGTSFDIGLVTSDGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAIEVGPQSAGSDPGPACYGRGGRLPTTTDTNLVLGYLDADNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A661H5A6_9GAMM (Hydantoinase/oxoprolinase family protein (Fragment) n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661H5A6_9GAMM)

HSP 1 Score: 298 bits (764), Expect = 2.700e-97
Identity = 141/166 (84.94%), Postives = 154/166 (92.77%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE  LR N Y +PML+VHN+ GMAQ++STH+LQTIHSGPVAGLEAT  L+ QF EPNVIATDMGGTSFDIGLVT+DGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIAR+DRLWGAVEVGP SAGSDPGPACY RGGKLPTTTDANLVLGYLDE+NYAGG
Sbjct:   25 GLASLESVLRKNKYEKPMLVVHNSCGMAQMSSTHALQTIHSGPVAGLEATNSLSSQFDEPNVIATDMGGTSFDIGLVTSDGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARFDRLWGAVEVGPQSAGSDPGPACYGRGGKLPTTTDANLVLGYLDEKNYAGG 190
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: UPI0010415831 (hydantoinase/oxoprolinase family protein n=2 Tax=unclassified Frankia TaxID=2632575 RepID=UPI0010415831)

HSP 1 Score: 303 bits (775), Expect = 1.200e-96
Identity = 141/166 (84.94%), Postives = 154/166 (92.77%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+ +LEV LR NGY +PMLLVHN+ GMAQLNST SLQTIHSGPVAGLEAT YL+G + +PN+IATDMGGTSFDIGLVT+DGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLW A+EVGP+SAGSDPGPACY RGG+LPTTTDANLVLGYLD +NYAGG
Sbjct:  234 GLGSLEVELRRNGYTKPMLLVHNSGGMAQLNSTSSLQTIHSGPVAGLEATNYLSGTYNQPNIIATDMGGTSFDIGLVTSDGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWDAIEVGPESAGSDPGPACYGRGGRLPTTTDANLVLGYLDADNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A062WRI7_9ACTN (N-methylhydantoinase A/acetone carboxylase, beta subunit n=10 Tax=Frankia TaxID=1854 RepID=A0A062WRI7_9ACTN)

HSP 1 Score: 300 bits (769), Expect = 9.390e-96
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE+ LR NGY +PMLLVHNTSGMAQLNST SLQTIHSGPVAGLEAT YL+  + +PN+IATDMGGTSFDIGLVT+DGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLW A+EVGP+SAGSDPGPACY RGG+ PTTTDANLVLGYLD +NYAGG
Sbjct:  234 GLASLEIELRRNGYTKPMLLVHNTSGMAQLNSTSSLQTIHSGPVAGLEATNYLSKTYHQPNIIATDMGGTSFDIGLVTSDGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWEAIEVGPESAGSDPGPACYGRGGRFPTTTDANLVLGYLDADNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A522ABV7_9GAMM (Hydantoinase/oxoprolinase family protein (Fragment) n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A522ABV7_9GAMM)

HSP 1 Score: 292 bits (747), Expect = 5.590e-95
Identity = 136/166 (81.93%), Postives = 152/166 (91.57%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE  LR +GY RPML+VHN+ GMAQ++STHSLQT+HSGPVAGLEAT  L+ QF EPN+IATDMGGTSFDIGLVT DGVKFYDFNPVIDRWLVSTPM+YLHTLGAGGGSIAR+DRLW AVEVGP+SAGSDPGPACY RGG+ PTTTDANL+LGYLDE NYAGG
Sbjct:  234 GLASLERVLRRHGYRRPMLVVHNSGGMAQMSSTHSLQTVHSGPVAGLEATQSLSVQFNEPNLIATDMGGTSFDIGLVTGDGVKFYDFNPVIDRWLVSTPMSYLHTLGAGGGSIARFDRLWNAVEVGPESAGSDPGPACYGRGGRFPTTTDANLILGYLDENNYAGG 399
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BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A0P7BT33_9ACTN (Hydantoinase n=2 Tax=Frankia TaxID=1854 RepID=A0A0P7BT33_9ACTN)

HSP 1 Score: 298 bits (762), Expect = 1.030e-94
Identity = 139/166 (83.73%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE+ LR NGY +PMLLVHNT GMAQLNST SLQTIHSGPVAGLEAT YL+  + +PN+IATDMGGTSFDIGLVT+DGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLW A+EVGP+SAGSDPGPACY RGG+LPTTTD NLVLGYLD +NYAGG
Sbjct:  234 GLASLEIELRRNGYTKPMLLVHNTGGMAQLNSTASLQTIHSGPVAGLEATHYLSKTYDQPNLIATDMGGTSFDIGLVTSDGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWSAIEVGPESAGSDPGPACYGRGGRLPTTTDTNLVLGYLDADNYAGG 399
[Close]
BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Match: A0A496XH54_9GAMM (Hydantoinase/oxoprolinase family protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XH54_9GAMM)

HSP 1 Score: 294 bits (753), Expect = 2.340e-93
Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 1 
Query:    1 GMSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATGYLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMTYLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDANLVLGYLDEENYAGG 498
            G+++LE  LR N Y +PML+VHN+ GMAQ++STHSLQTIHSGPVAGLEA   L+ QF EPNVIATDMGGTSFDIGLVT+DGVKFYDFNP+IDRWL+STPM+YLHTLGAGGGSIAR+DR+WGAVEVGP SAGSDPGPACY RGGKLPTTTDANLVLGYLDE+NYAGG
Sbjct:  234 GLASLESVLRKNKYPKPMLVVHNSCGMAQMSSTHSLQTIHSGPVAGLEAANSLSSQFDEPNVIATDMGGTSFDIGLVTSDGVKFYDFNPIIDRWLISTPMSYLHTLGAGGGSIARFDRVWGAVEVGPQSAGSDPGPACYGRGGKLPTTTDANLVLGYLDEKNYAGG 399
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59283.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523P265_9PROT1.170e-10089.16Hydantoinase/oxoprolinase family protein n=2 Tax=P... [more]
A0A257DFP0_9BURK1.430e-9886.75Hydantoinase n=1 Tax=Burkholderiales bacterium PBB... [more]
UPI00068AB7584.000e-9887.35hydantoinase/oxoprolinase family protein n=1 Tax=T... [more]
UPI001F4974C32.060e-9784.34hydantoinase/oxoprolinase family protein n=1 Tax=C... [more]
A0A661H5A6_9GAMM2.700e-9784.94Hydantoinase/oxoprolinase family protein (Fragment... [more]
UPI00104158311.200e-9684.94hydantoinase/oxoprolinase family protein n=2 Tax=u... [more]
A0A062WRI7_9ACTN9.390e-9684.34N-methylhydantoinase A/acetone carboxylase, beta s... [more]
A0A522ABV7_9GAMM5.590e-9581.93Hydantoinase/oxoprolinase family protein (Fragment... [more]
A0A0P7BT33_9ACTN1.030e-9483.73Hydantoinase n=2 Tax=Frankia TaxID=1854 RepID=A0A0... [more]
A0A496XH54_9GAMM2.340e-9382.53Hydantoinase/oxoprolinase family protein n=2 Tax=G... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59283contigP-wetherbeei_contig59283:3..500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1158292.JPOE01000002_gene2325
PFAMsHydant_A_N,Hydantoinase_A
Model size498
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00040,RC00632
KEGG koko:K01473,ko:K10701
KEGG ReactionR03187,R05453
KEGG Pathwayko00330,ko00642,ko01100,ko01120,ko01220,map00330,map00642,map01100,map01120,map01220
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.92e-98
EggNOG OGsCOG0145@1|root,COG0145@2|Bacteria,1MU2Y@1224|Proteobacteria,2VJUZ@28216|Betaproteobacteria,1KKDD@119065|unclassified Burkholderiales
EC3.5.2.14,6.4.1.8
DescriptionHydantoinase/oxoprolinase N-terminal region
Cds size495
COG categoryEQ
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186876.0413752-UTR-P-wetherbeei_contig59283:2..51683186876.0413752-UTR-P-wetherbeei_contig59283:2..5Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig59283 3..5 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186876.0568023-CDS-P-wetherbeei_contig59283:5..5001683186876.0568023-CDS-P-wetherbeei_contig59283:5..500Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59283 6..500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59283.1.1prot_P-wetherbeei_contig59283.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59283 6..500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59283.1.1

>prot_P-wetherbeei_contig59283.1.1 ID=prot_P-wetherbeei_contig59283.1.1|Name=mRNA_P-wetherbeei_contig59283.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
MSTLEVALRANGYARPMLLVHNTSGMAQLNSTHSLQTIHSGPVAGLEATG
YLAGQFKEPNVIATDMGGTSFDIGLVTADGVKFYDFNPVIDRWLVSTPMT
YLHTLGAGGGSIARYDRLWGAVEVGPDSAGSDPGPACYARGGKLPTTTDA
NLVLGYLDEENYAGG
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mRNA from alignment at P-wetherbeei_contig59283:3..500+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59283.1.1 ID=mRNA_P-wetherbeei_contig59283.1.1|Name=mRNA_P-wetherbeei_contig59283.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59283:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
GGCATGTCGACCCTGGAGGTCGCGCTGCGGGCTAACGGTTATGCGCGTCC
GATGCTGCTGGTGCATAACACCTCGGGCATGGCACAGCTCAACTCGACCC
ATTCGCTGCAGACCATTCATTCGGGCCCGGTCGCAGGCCTTGAAGCCACT
GGCTATCTCGCTGGCCAGTTCAAGGAACCGAACGTCATCGCCACCGACAT
GGGCGGCACCTCCTTCGATATCGGTCTGGTCACCGCCGACGGCGTGAAGT
TCTACGACTTCAACCCGGTCATTGATCGCTGGCTGGTGTCGACGCCGATG
ACTTATCTGCACACGCTTGGCGCCGGTGGCGGTTCCATCGCCCGCTATGA
CCGTCTGTGGGGAGCGGTGGAAGTGGGGCCAGATTCCGCAGGCTCCGATC
CCGGACCGGCGTGCTATGCGCGTGGCGGCAAATTGCCGACTACCACCGAC
GCCAACCTCGTGCTGGGCTATCTCGACGAAGAGAATTACGCCGGTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59283:3..500+

>mRNA_P-wetherbeei_contig59283.1.1 ID=mRNA_P-wetherbeei_contig59283.1.1|Name=mRNA_P-wetherbeei_contig59283.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig59283:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGACCCTGGAGGTCGCGCTGCGGGCTAACGGTTATGCGCGTCCGAT
GCTGCTGGTGCATAACACCTCGGGCATGGCACAGCTCAACTCGACCCATT
CGCTGCAGACCATTCATTCGGGCCCGGTCGCAGGCCTTGAAGCCACTGGC
TATCTCGCTGGCCAGTTCAAGGAACCGAACGTCATCGCCACCGACATGGG
CGGCACCTCCTTCGATATCGGTCTGGTCACCGCCGACGGCGTGAAGTTCT
ACGACTTCAACCCGGTCATTGATCGCTGGCTGGTGTCGACGCCGATGACT
TATCTGCACACGCTTGGCGCCGGTGGCGGTTCCATCGCCCGCTATGACCG
TCTGTGGGGAGCGGTGGAAGTGGGGCCAGATTCCGCAGGCTCCGATCCCG
GACCGGCGTGCTATGCGCGTGGCGGCAAATTGCCGACTACCACCGACGCC
AACCTCGTGCTGGGCTATCTCGACGAAGAGAATTACGCCGGTGGC
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