mRNA_P-wetherbeei_contig5926.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A836CL44_9STRA (Heat shock protein Hsp33 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL44_9STRA) HSP 1 Score: 373 bits (957), Expect = 8.570e-127 Identity = 189/285 (66.32%), Postives = 231/285 (81.05%), Query Frame = 1
Query: 19 ETSPMSNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSL--PYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQK-STAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
E SPM+NRDDH++S LSGN EV+VK ITAR+LVQDA++KQDLRPLAADALGRVM+CTLL +SGLKD+ETLQ TF GDGPL G++AI+DG GG+RGYVG+G V L PY DVS GIG G+LKV+RNHP+YERPYSGIV+LRNS+VA+DVAGYL+DS+Q S AI AGV V GA+VRQAGG+L+ETLPGAS+ET + N+ L+ EDP++LL G+TP +A LLEG+GGI+S+T+ P YKCHCSSERV+RALRLLG EEV+ I+ E +EV E
Sbjct: 22 EPSPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPY------DVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCE 300
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: D8LMK8_ECTSI (Heat shock protein 33 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK8_ECTSI) HSP 1 Score: 351 bits (900), Expect = 1.220e-116 Identity = 171/288 (59.38%), Postives = 219/288 (76.04%), Query Frame = 1
Query: 1 GVLFASETSPMSNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
G A T+P+ N DH+VS ++GN +VV +A+TARNL+QDALI+QDL PLAADALGRVM+CT+LM+ GLKD+ET QL+F G GPL GV+AISDGEGG+RGYV +G+V LP +NG DV+ GIG GLLKV+RNHP+Y+RPY+GI L+ EVA+D A YL +SEQKS AIAAG V A+VRQAGG+++ETLP AS+ETE+ I N+ L+ + DPS L+G G+TP + LLEGLGG+ +IT + P + CHCS ERVY AL+LL EV +VK+ E +EV E
Sbjct: 109 GKAIADNTAPVGNDADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLSFSGSGPLGGVVAISDGEGGVRGYVTNGKVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKEETIEVKCE 396
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE) HSP 1 Score: 353 bits (905), Expect = 9.050e-114 Identity = 172/288 (59.72%), Postives = 221/288 (76.74%), Query Frame = 1
Query: 1 GVLFASETSPMSNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
G A T+P++N DH+VS ++GN +VV +A+TARNL+QDALI+QDL PLAADALGRVM+CT+LM+ GLKD+ET QLTF G GPL GV+AISDGEGG+RGYV +G+V LP +NG DV+ GIG GLLKV+RNHP+Y+RPY+GI L+ EVA+D A YL +SEQKS AIAAG V A+VRQAGG+++ETLP AS+ETE+ I N+ L+ + DPS L+G G+TP + LLEGLGG+ +IT + P + CHCS ERVY AL+LL EV +VK++E +EV E
Sbjct: 397 GKTIADITAPVANNADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLTFSGSGPLGGVVAISDGEGGVRGYVTNGKVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKAVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKDEAIEVKCE 684
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A1E7EWZ2_9STRA (Hsp33 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWZ2_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.860e-65 Identity = 114/274 (41.61%), Postives = 179/274 (65.33%), Query Frame = 1
Query: 34 SNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGD---GRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLIN-DAED--PSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKE 837
SNR+D + S LS + V + A TARN+V D +I + + ADA+GR ++C L+MS+G+++++T Q+TF DGPL+GV+AISDG G +RGYVG G + LP +G G+++V++NHP++ PY+GI +R+ ++ D+ YL +SEQ+S A+AA +++G + AGG+LIE LP A+ ET +NL +L+ D D P+ LL G+TP +A +L+GLG + + +P ++C CSS+R+ RALRL+ +EV I++E
Sbjct: 72 SNRNDQVFSALSEDGSVKITACTARNIVNDLMIMHTMTAVPADAIGRTVVCALMMSNGMQEEQTCQITFNADGPLRGVVAISDGVGNVRGYVGSPMLGDIELPE----------ALGQGMVQVVKNHPDWSNPYNGITSIRHGDIDRDIGAYLAESEQRSCALAAATSINGILCTAAGGYLIEQLPNATPETLARVEKNLATLVEKDGSDKLPANLLLNGVTPLEIAETILDGLGMVPLQQI-SPKFQCSCSSDRLIRALRLIPRKEVDEILEE 334
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A448ZMK1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK1_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.040e-63 Identity = 116/280 (41.43%), Postives = 178/280 (63.57%), Query Frame = 1
Query: 34 SNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLIN-DAED--PSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
SNRDD + S +S + V V A TARNLV D +I L + ADA+GR +C L+MS+G++ ++T Q+T DGPL+GV+AISDG G ++ YVG V G ++ +G G+++V++NHP++ PY+GI +R+ ++ D+ YL +SEQ+S A+AAG++V+G + AGG+LIE LP A+ ET +NL L+ D + P+ LL G+TP +A +L+GLG + + +P ++C CSS+R+ RALRL+ EV I++ E +E E
Sbjct: 96 SNRDDQVFSAISEDGSVKVTACTARNLVNDLMIMHTLTAVPADAIGRTAVCALMMSNGMQAEQTCQITLNADGPLRGVVAISDGVGHVKAYVGSPMV-------GDIELPEAVGKGMVQVVKNHPDWNNPYNGITAIRHGDIDRDIGAYLAESEQRSCALAAGISVNGILCTAAGGYLIEQLPNATPETLSRVEKNLGKLVEKDGGNKLPTGLLLKGVTPLEIAETILDGLGMVPLQQI-SPEFECKCSSDRLIRALRLIPRSEVDEILESEEKIEARCE 367
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A0G4ETJ1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETJ1_VITBC) HSP 1 Score: 211 bits (538), Expect = 9.390e-63 Identity = 119/279 (42.65%), Postives = 183/279 (65.59%), Query Frame = 1
Query: 34 SNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYV-GDGRVSLPYNENGRPDVST--GIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGID-SITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVS 858
SN D +VS LS + +VV+A++ARNLVQDALI+ L P+ A ALG V +C LL++SGLKD+E LQLT G+GP+ G+ +I+DG G ++ + GD + + + +G + S GIG G ++++R+HP++ +P+ I ++RN + +VA L ++EQ+++AI AGV V GA+V+ A G+ +E LP AS+ET + NL+ L ND+ S L +GLT L R+LEG+G + + + APSYKC CS ER L+ L E+ I+ + EI+E++
Sbjct: 10 SNAHDTLVSALSADGGIVVRAVSARNLVQDALIRLQLSPVPAQALGEVAVCNLLLASGLKDREQLQLTIAGNGPISGITSIADGHGDVKAMLQGDRKFTGQQDASGSREKSIRRGIGRGQIQLVRSHPDWIQPFQSITEIRNVSIPINVAFALLETEQRTSAIDAGVEVSGALVQAAAGYYVERLPDASEETLQRVEENLKGLKNDSL--STLFRSGLTAPDLVDRILEGVGVMHGTYSTGAPSYKCSCSPERFLYRLKALPRPELEQIILKQEILEMT 286
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A7S4KX66_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KX66_GUITH) HSP 1 Score: 210 bits (534), Expect = 5.140e-62 Identity = 123/288 (42.71%), Postives = 175/288 (60.76%), Query Frame = 1
Query: 46 DHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKD--------QETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVD----GAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSI---TVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
D +V +LS N EV KA+ A LV+ A Q P+ + ALGR MIC LLM+ G KD +ETLQ+ +GDGP++ V AI+DG G +RGY + V LP N+ G+ DVS +G G + V+RN+P +++PY+GI + + E+A D+A YL +SEQ A+ AGV V+ G VV AGGWL++ LPGASDET + +N+ +L P+ L+ +G T + L +GL +SI T++ P Y C CS E+VYR + LL E++ I+KE +EV E
Sbjct: 79 DELVGMLSDNGEVSFKAVVATGLVRGACGMQKTSPVCSAALGRTMICALLMAQGKKDAEMYGDQAKETLQIDIRGDGPIKQVFAIADGAGEVRGYTANPFVLLPPNDKGKLDVSRAVGKGFITVVRNNPFWKQPYNGITSIVSGEIAEDMANYLTESEQTPCALGAGVLVETETEGVVV--AGGWLVQMLPGASDETISIVEKNIMNL---QMSPTSLIKSGKTARDICDMLSQGLRSAESIPAYTIK-PKYSCKCSIEKVYRTVALLPESEMQEILKEKGCIEVRCE 360
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: M2VZG8_GALSU (Molecular chaperone Hsp33 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZG8_GALSU) HSP 1 Score: 207 bits (527), Expect = 1.210e-60 Identity = 114/264 (43.18%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 46 DHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAV--DGAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIV 831
D + +S N +V +K++ A LV A Q+ +P+A ALGR +IC LL+S+G K ET+ + F+G GPL+ V+A++DG G +RGYVGD V LP N G+ DVS IG G+++V RNH +++PY G+ ++ + EVA D+A YL SEQ +A+AAGV V DG+V AGG+L++ LPGAS+ET +L L SL P+ ++ G+ T + +L EGL I + P Y+CHCS +RV R + LL +E+ +V
Sbjct: 122 DELARTISCNGKVSLKSLVATGLVDGAARIQETKPVATAALGRTLICALLLSAGKKSDETVNIEFRGSGPLRTVVAVADGLGQVRGYVGDRNVDLPPNRKGKLDVSRAIGEGIVRVTRNHYTWKQPYQGLTRIVSGEVAEDIANYLYQSEQIFSAVAAGVFVKPDGSV-SAAGGYLVQLLPGASEETLKLLEETLYSL---EYSPTEMIRLGMNSTDIVNKLAEGLN-IQQVHKSRPLYRCHCSIDRVERTVALLPKDEIDQLV 380
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: A0A6T6L864_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6L864_9RHOD) HSP 1 Score: 203 bits (516), Expect = 1.820e-60 Identity = 115/272 (42.28%), Postives = 169/272 (62.13%), Query Frame = 1
Query: 55 VSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVD--GAVVRQAGGWLIETLPGASDETERLTIRNLQSLINDAEDPSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVEVSAE 864
V ++ N EV + +T LV A Q P+A+ ALGR MIC LL+S+G K+ ET+QL +GDGPL+ +AIS+G G +RGYVGD V LP N G DV +G G+L V+RNHP ++ PY+G+ + + EVA DVA YL DSEQ +A+ AGV VD G VV AGG+L+ LPGA++++ R +N++SL P+ L+ +G++ T + +L++ L ++ + P Y C C ERV R + LLG +++ ++ E VE + E
Sbjct: 1 VRTIAANGEVSCRVVTGTGLVNAAANVQRTSPVASAALGRAMICGLLLSAGKKEGETVQLELRGDGPLKTTVAISNGRGEVRGYVGDPSVVLPPNSEGHLDVGKAVGKGILAVVRNHPMWKNPYTGLTTIVSGEVAEDVASYLADSEQTPSALGAGVLVDKKGEVVA-AGGFLVSMLPGATEDSIRTVEQNVKSL---KMTPTELIRSGMSATDIVGKLMKDLDPLE-VAESYPKYYCSCGRERVRRTVVLLGRKDIEDLIAEQGHVEATCE 267
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Match: B5Y5I8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5I8_PHATC) HSP 1 Score: 204 bits (518), Expect = 7.570e-60 Identity = 105/276 (38.04%), Postives = 174/276 (63.04%), Query Frame = 1
Query: 34 SNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMICTLLMSSGLKDQETLQLTFQGDGPLQGVMAISDGEGGIRGYVGDGRVSLPYNENGRPDVSTGIGSGLLKVIRNHPEYERPYSGIVKLRNSEVAFDVAGYLKDSEQKSTAIAAGVAVDGAVVRQAGGWLIETLPGASDETERLTIRNLQSLIN-DAED--PSLLLGAGLTPTGLATRLLEGLGGIDSITVRAPSYKCHCSSERVYRALRLLGVEEVRSIVKENEIVE 852
+NRDD + S +SG+ + V A T RNL+ D ++ + DA+GR + C LL+++G++D++ +Q+T GDGP++G++AI+ G G +RGYVG + G ++ +G G +++++NHP++ RPY+GI +R+ ++ D+ YL +SEQ+S A+AA A++G + AGG+LIE LPG ET +NL L+ D D P+ LL +G+TP +A +L+GL + + P CHC+ +R++R+LRLL EEV I+++ E +E
Sbjct: 62 NNRDDQVFSAMSGDGGIKVTAATVRNLLNDISLQHTMTATPTDAMGRTVTCGLLLANGIQDEQIVQITMNGDGPIRGIVAIASGTGQVRGYVGSPGL-------GEMSLTDAVGKGSVQIVKNHPDWPRPYNGITAIRHGDIDRDIGIYLAESEQRSCALAAATAMNGILCTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGGDELPANLLLSGVTPLDMAAIILDGLD-MQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEVDDILEKEEQIE 329 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5926.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5926.1.1 >prot_P-wetherbeei_contig5926.1.1 ID=prot_P-wetherbeei_contig5926.1.1|Name=mRNA_P-wetherbeei_contig5926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp MSNRDDHIVSVLSGNREVVVKAITARNLVQDALIKQDLRPLAADALGRVMback to top mRNA from alignment at P-wetherbeei_contig5926:92..2231- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5926.1.1 ID=mRNA_P-wetherbeei_contig5926.1.1|Name=mRNA_P-wetherbeei_contig5926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2140bp|location=Sequence derived from alignment at P-wetherbeei_contig5926:92..2231- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5926:92..2231- >mRNA_P-wetherbeei_contig5926.1.1 ID=mRNA_P-wetherbeei_contig5926.1.1|Name=mRNA_P-wetherbeei_contig5926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig5926:92..2231- (Phaeothamnion wetherbeei SAG_119_79)back to top |