mRNA_P-wetherbeei_contig59251.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A3C0TUN6_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUN6_9PROT) HSP 1 Score: 138 bits (347), Expect = 6.480e-37 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 28 AMTLLQAGATRASLEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDARGNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGNGKYQINTTLT 336
A LL+ G T AS EGQI+AA VD+FS+R++ GMLTVNSRGSSDV+A+L D RGNP+ASNDDGG GYNF L P+ PG YLL+V+HCCGG G Y ++ LT
Sbjct: 281 ATPLLRPGETEASREGQIAAAGAVDIFSIRVASMGMLTVNSRGSSDVSARLLDQRGNPIASNDDGGNGYNFALRAPLTPGRYLLAVKHCCGGGGNYHLDAALT 383
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A352KB49_9PROT (PPC domain-containing protein (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KB49_9PROT) HSP 1 Score: 119 bits (299), Expect = 9.430e-33 Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 1 DDYGATARTAMTLLQAGATRASLEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDARGNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGNGKYQINTTL 333
DD+G T TA LL GA AS+ G I A DVDMFSL ++ PG LT+ S G +D+TA L+D+ G V S+D+ G+ YNF + + V PGTY+L+V+HCC G+G+YQ++T L
Sbjct: 1 DDHGDTTATATPLLGGGALTASITGHIGGAGDVDMFSLTVTAPGNLTIASSGPTDITASLSDSDGTLVGSDDNSGSRYNFAVQSAVTPGTYVLTVRHCCSGSGRYQLDTVL 111
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A2E2YC05_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YC05_9PROT) HSP 1 Score: 75.5 bits (184), Expect = 1.150e-13 Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 76 QISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDAR-GNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGNGKYQI 321
+I + +V + L ++EP ++++S G SD+ A+++D R G + ++DDGG GYNF ++ P+ G Y++ VQHCC G G + +
Sbjct: 290 RIGVSGEVKRYKLILNEPQKVSISSNGPSDLIARISDKRTGKVIDTDDDGGKGYNFSISQPLQAGEYIIEVQHCCAGTGTFSL 372
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A2D7CM24_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A2D7CM24_9PROT) HSP 1 Score: 60.5 bits (145), Expect = 2.510e-8 Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 142 VNSRGSSDVTAKLTDARGNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGNGKYQI 321
+NSRG +DV + +G + S+DD G YNF + + PG Y+LSV+HCC G G + +
Sbjct: 316 LNSRGPTDVVGAILTKKGKIILSDDDSGGNYNFAIHQKLPPGDYILSVKHCCFGEGPFSL 375
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A6J4Y492_9DELT (Type IV fimbrial biogenesis protein PilY1 n=1 Tax=Olavius algarvensis Delta 1 endosymbiont TaxID=334747 RepID=A0A6J4Y492_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 3.990e-8 Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 64 SLEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDARGNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGN-GKYQIN 324
S+ G I + D D F + G+LT + SD + L D GNP+A+++DGGAG NF ++ V+PG Y + V+ G+ G Y ++
Sbjct: 838 SIGGNIESGGDEDYFKVVFWGTGILTAYTTDGSDPSGTLLDEAGNPIAADEDGGAGNNFRISQTVDPGVYYVVVKEKNSGDTGSYTLH 925
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A2E9UXE7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9UXE7_9PROT) HSP 1 Score: 57.4 bits (137), Expect = 3.010e-7 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 142 VNSRGSSDVTAKLTDARGNPVASNDDGGAGYNFGLTTPVNPGTYLLSVQHCCGGNGKYQI 321
+ SRG +DV + +G + S+DD G YNF + + PG Y+LSV+HCC G G + +
Sbjct: 306 LKSRGPTDVVGAIFTKKGKIILSDDDSGRNYNFAIHQKLPPGDYILSVRHCCFGEGPFSL 365
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A6L7MV59_9GAMM (PPC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7MV59_9GAMM) HSP 1 Score: 55.1 bits (131), Expect = 2.040e-6 Identity = 33/107 (30.84%), Postives = 54/107 (50.47%), Query Frame = 1
Query: 31 MTLLQAGATRAS---------LEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDARGNPVASNDDGGA-GYNFGLTTPVNPGTYLLSVQHCCGGNGKYQI 321
M++L G TRA+ E + +DVD+F + + + V S G++D A L+D+ G +A+NDD A NF + + G Y L+V+ G G Y++
Sbjct: 130 MSMLDDGNTRATSTVIAFGVRTEASLETRDDVDVFRIELQGRAAVAVQSGGTTDTMAVLSDSEGGTIAANDDASATSLNFRIVETLEGGVYYLTVRGSGGATGAYRV 236
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Match: A0A6L7XSQ2_9GAMM (PPC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XSQ2_9GAMM) HSP 1 Score: 53.1 bits (126), Expect = 9.350e-6 Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 1
Query: 4 DYGATARTAMTLLQAGATRASLEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLTDARGNPVASNDDGGA-GYNFGLTTPVNPGTYLLSVQHCCGGNGKYQI 321
D G T T+ + + ASLE + +DVD+F + + + V S G++D A L+D+ G +A+NDD A NF + + G Y L+V G G Y++
Sbjct: 41 DDGNTRATSTVIAFGVRSEASLETR----DDVDVFRIELQGRAEIAVQSGGTTDTMAALSDSEGGAIATNDDASATSLNFRIVETLEGGVYYLTVSGSNGATGPYRV 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig59251.1.1 >prot_P-wetherbeei_contig59251.1.1 ID=prot_P-wetherbeei_contig59251.1.1|Name=mRNA_P-wetherbeei_contig59251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MTLLQAGATRASLEGQISAANDVDMFSLRISEPGMLTVNSRGSSDVTAKLback to top mRNA from alignment at P-wetherbeei_contig59251:25..369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig59251.1.1 ID=mRNA_P-wetherbeei_contig59251.1.1|Name=mRNA_P-wetherbeei_contig59251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig59251:25..369+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig59251:25..369+ >mRNA_P-wetherbeei_contig59251.1.1 ID=mRNA_P-wetherbeei_contig59251.1.1|Name=mRNA_P-wetherbeei_contig59251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig59251:25..369+ (Phaeothamnion wetherbeei SAG_119_79)back to top |