mRNA_P-wetherbeei_contig5921.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: D8LCD0_ECTSI (RBR-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD0_ECTSI) HSP 1 Score: 186 bits (472), Expect = 5.270e-50 Identity = 91/171 (53.22%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 1 DDEVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
D V I+ +L+ LM +VV D+++ + I EAATALLRHFSWN+E+LFDQ+Y P+SVM++VGI S+ E L C IC EE +AYAL C HFFC CW YL AKV +GPT VYTTCP HKCP I SES F +F +A +Y ++L SFVDINK LR
Sbjct: 73 DTAVAFIDQAQLKVLMSKVVSDISETVNISAEAATALLRHFSWNRERLFDQYYTSPESVMEKVGIAAGGHKTGSLKDGEKLECRICCEE-FTAKEAYALACKHFFCRGCWAAYLGAKVQEGPTSVYTTCPEHKCPQIASESTFSEFLSAEDLKRYQAFSLTSFVDINKMLR 242
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A6S9ISQ1_HETAK (RBR-type E3 ubiquitin transferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ISQ1_HETAK) HSP 1 Score: 183 bits (464), Expect = 6.200e-49 Identity = 92/180 (51.11%), Postives = 120/180 (66.67%), Query Frame = 1
Query: 1 DDEVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVG-ITESCVAGSSMGAAEM--------LRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
D+++RII+ ELR LM EVV +++ VM +P AATALLR FSWNKEKLFD++Y DP+SV +VG ++ + G S G L C IC +E I G+ A+AL C HFFC CW YL+ KV +GP CVYT CP KCP IV+E +F +F +A KY Q++L+SFVDIN+ LR
Sbjct: 46 DEDIRIIDTKELRALMDEVVGEISGVMALPPSAATALLRFFSWNKEKLFDKYYSDPESVTSKVGDLSAAARMGQSSGPGXXXXXXXXXSLLCRICCDE-IDGATAFALGCAHFFCRVCWAQYLDVKVAEGPACVYTVCPEQKCPRIVTEEIFQEFLSAETFLKYQQFSLDSFVDINRTLR 224
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A836CMB7_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB7_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.550e-47 Identity = 92/183 (50.27%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 4 DEVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVA-------------GSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
D+V I+ +L+ LM VV +++ VM IP +AATALLR FSWN EKL+DQFY +P+S+ +VGIT + + GS A L C IC E +P DA ALPCGHFFC +CWRGYL + GP CVYTTCP HKCP IV E +F A+Y +Y+L SFVDINK+LR
Sbjct: 71 DDVTILSEGDLKVLMHSVVAEISQVMNIPEDAATALLRFFSWNVEKLYDQFYANPESITAKVGITNADLGVSHAAAPVRTASGGSGKAAGAALLCRICCEN-VP--DAEALPCGHFFCEECWRGYLCNAIQQGPACVYTTCPEHKCPQIVPEDVFRAHVTPEELARYQEYSLRSFVDINKRLR 250
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A835Z7M6_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M6_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.460e-39 Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 31 ELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAE---------------------------MLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
++R LM VV+D A V+ +P AA ALLR F WN+E L+D+FY DPDSV +VGI + S +G A +LRC IC ++ DA ALPC HFFC +CW G+L + GP CVYTTCP HKCP IV+E +F +A A+Y +AL SFVD N++LR
Sbjct: 7 DVRALMDAVVDDTAAVVSVPRGAAAALLRFFRWNQESLYDRFYADPDSVTAKVGIGGAGKGMSRIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXGALLRCRICCDDV---EDALALPCAHFFCEECWGGFLRNALASGPPCVYTTCPEHKCPQIVTEDVFRAHLSAQELARYRDFALRSFVDTNRRLR 191
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: K3WFE7_GLOUD (RBR-type E3 ubiquitin transferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFE7_GLOUD) HSP 1 Score: 142 bits (359), Expect = 6.790e-34 Identity = 64/167 (38.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 4 DEVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINK 504
+E R+I+ EL ++ ++A V++I A +LRHF WNKEKL++ +Y DP + G+ + + + +M+ C IC + P ++ + + CGH +C +CW+ YL K+G+GP CV T+CPAH C IVS+ +F KF KY +Y L S+VDINK
Sbjct: 95 EEYRVIDEQELFLEQRGLIHEIAQVLEISPSVAAIMLRHFGWNKEKLYEVYYSDPAKAQEDAGVACASKSAPKLLDGQMVDCMICCDS-YPANEVFGMGCGHLYCVNCWKPYLSLKIGEGPLCVTTSCPAHGCKEIVSDEIFKKFTTPDDFIKYSRYVLRSYVDINK 260
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A5D6YAY3_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAY3_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.150e-33 Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 7 EVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINK 504
E R+I+ EL +V ++A V++I A LLRHF+WNKEKL++ +Y DP G+ S A ++ C IC + P S+ + + CGH FC DCW+ YL KVG+GP CV TTCPAH C V++++F K + +Y +Y L S+VDINK
Sbjct: 121 EYRVIDEEELFLEQRALVLEIAQVLEIAPAVAAVLLRHFAWNKEKLYEGYYADPAQAQADAGVAHSAAAAPTVD------CMICCDS-YPASEVFGMGCGHLFCLDCWKPYLSLKVGEGPLCVATTCPAHGCKEAVTDAIFKKLTSVEDFTRYSRYVLRSYVDINK 279
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: H3GR83_PHYRM (RBR-type E3 ubiquitin transferase n=22 Tax=Phytophthora TaxID=4783 RepID=H3GR83_PHYRM) HSP 1 Score: 140 bits (353), Expect = 3.630e-33 Identity = 66/169 (39.05%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 7 EVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
E +I+ EL Q ++ ++A V++I A+ LLRHF WNKEKLF+ +Y DP G+ + + + CNIC +E P + + + CGH +C +CW+ YL K+ +GP CV TTCPAH C +VS+ +F K KY +Y L SFVDINK ++
Sbjct: 75 EYHVIDEAELLQEQRALISEIAQVLEISSPVASVLLRHFGWNKEKLFEGYYADPVKTQHEAGVEFADKQAPVIPDGTKVDCNICCDE-YPAHEVFGMGCGHVYCLNCWKPYLSLKIQEGPICVTTTCPAHGCKEVVSDIIFKKIVNPEDYRKYARYLLRSFVDINKGVK 242
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: M4BSU2_HYAAE (RBR-type E3 ubiquitin transferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BSU2_HYAAE) HSP 1 Score: 137 bits (345), Expect = 5.860e-32 Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 7 EVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINKKLR 513
E +I+ EL Q ++ ++A V++I A+ LLR+FSWNKEKLF+ +Y DP V G+ + + A+ IC +E SD + + CGH +C CW+ YL K+G GP CV TTCPAH C +VSES+F K A KY +Y L SFVDIN+ ++
Sbjct: 102 EYHVIDEEELLQEQHALIHEIAQVLEISTSEASVLLRYFSWNKEKLFEGYYADPVKVKHEAGVEFADKQAPVIPAST----KICCDE-YTASDVFGMGCGHVYCLGCWKPYLSLKIGGGPICVTTTCPAHGCKEVVSESIFKKIVDAQDYLKYARYLLRSFVDINRGVK 265
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A2D4C1R6_PYTIN (RBR-type E3 ubiquitin transferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R6_PYTIN) HSP 1 Score: 136 bits (343), Expect = 1.450e-31 Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 4 DEVRIIEAVELRQLMGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINK 504
DE R+IE EL ++V +++ V++ A LLRHF WNKEKLF+ +Y DP Q G+ + V+ + + + C IC + P ++ + + C H +C +CW+ YL K+ +GP CV TTCPAH C V +S+F K A A+Y ++ L S+VDINK
Sbjct: 130 DEYRVIEEEELLAQQRKLVAEISQVLETSMSVAAILLRHFGWNKEKLFEGYYLDPTKARQEAGVEFADVSPPTFAEDQEIDCLICCDTYKP-NEIFGMGCQHVYCVNCWKSYLSLKITEGPACVNTTCPAHGCKEAVPDSVFRKMLTAEEFARYSRFVLRSYVDINK 295
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Match: A0A1V9ZW63_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW63_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.590e-31 Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 55 VVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGITESCVAGSSMGAAEMLRCNICTEEGIPGSDAYALPCGHFFCNDCWRGYLEAKVGDGPTCVYTTCPAHKCPLIVSESLFHKFAAAAAAAKYDQYALNSFVDINK 504
++ DVA V+ + A+ LLRHF W+KEKL D+++ DP+ V G + + +GA++ RC IC E+ S+ AL C HFFC++CW YL+ K+ +GP C+ TTCP H C VS+++F K A AKYD+Y L SFVDINK
Sbjct: 84 LIMDVASVLSVSYAKASLLLRHFFWDKEKLLDKYWSDPEGVSAAAGALYTGKE-AELGASKA-RCTICCEDET--SELVALGCKHFFCHECWVFYLQHKISEGPLCITTTCPEHGCKERVSDAIFKKLLPPAEYAKYDKYVLRSFVDINK 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5921.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5921.1.1 >prot_P-wetherbeei_contig5921.1.1 ID=prot_P-wetherbeei_contig5921.1.1|Name=mRNA_P-wetherbeei_contig5921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp MGEVVEDVADVMKIPGEAATALLRHFSWNKEKLFDQFYKDPDSVMQRVGIback to top mRNA from alignment at P-wetherbeei_contig5921:25..2272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5921.1.1 ID=mRNA_P-wetherbeei_contig5921.1.1|Name=mRNA_P-wetherbeei_contig5921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2248bp|location=Sequence derived from alignment at P-wetherbeei_contig5921:25..2272- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5921:25..2272- >mRNA_P-wetherbeei_contig5921.1.1 ID=mRNA_P-wetherbeei_contig5921.1.1|Name=mRNA_P-wetherbeei_contig5921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig5921:25..2272- (Phaeothamnion wetherbeei SAG_119_79)back to top |