mRNA_P-wetherbeei_contig59205.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59205.1.1
Unique NamemRNA_P-wetherbeei_contig59205.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: UPI001E456C52 (glutathione S-transferase family protein n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E456C52)

HSP 1 Score: 283 bits (723), Expect = 3.290e-94
Identity = 144/166 (86.75%), Postives = 152/166 (91.57%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYALKSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E VFVDIH+RLSQQQPDYVRLNP MTVPTLVLADR+L +SRDIAEYAL S  D ETKAW+DLHY YPIEELTFGG+LARNPLAR+MIPKRLEA RRQLLAHAA NPDLA VY ARAAVFA R++TFEPDAVVKLSERRR EAIGFMDRLEQTLRDGRAVLVPPAYG
Sbjct:   38 ERVFVDIHYRLSQQQPDYVRLNPGMTVPTLVLADRILVESRDIAEYALGSTSDPETKAWVDLHYAYPIEELTFGGLLARNPLARIMIPKRLEAARRQLLAHAAANPDLAAVYRARAAVFARRIATFEPDAVVKLSERRRAEAIGFMDRLEQTLRDGRAVLVPPAYG 203          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A259MQB3_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MQB3_9PROT)

HSP 1 Score: 272 bits (696), Expect = 4.190e-90
Identity = 138/166 (83.13%), Postives = 149/166 (89.76%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYALKSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E VFVDIH+RLSQQQPDYVRLNP MTVPTLVLADRVL +SRDIA+YAL +  D ETKAW+DLHY YPIEELTFGGILARNPLAR+MIPKRL+A RRQLLAHAA NPDLA+VYEARAAVFA R+  FEPDAVV LS+RRRTEAIGFMDRLEQ L+DGR VL PPAYG
Sbjct:   38 ERVFVDIHYRLSQQQPDYVRLNPGMTVPTLVLADRVLVESRDIAQYALGAPTDAETKAWVDLHYAYPIEELTFGGILARNPLARIMIPKRLDAARRQLLAHAAENPDLASVYEARAAVFAGRIKAFEPDAVVALSQRRRTEAIGFMDRLEQALQDGRPVLAPPAYG 203          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A1E4HPM8_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HPM8_9PROT)

HSP 1 Score: 256 bits (654), Expect = 8.570e-84
Identity = 126/169 (74.56%), Postives = 148/169 (87.57%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E   +DIH +L+QQQPDYVRLNP+MTVPTLVL DR+L QSRDIAEYAL   ++ +DG+TK+WLDLHYGYPIEELTFGG+LARNP+AR+M+PKRLE+  R+LL  AA+NPDLA VYE RAAVFA R+ TF+P+AV +LSERRR EA+GFMDRLEQTLRDGRAVLVPP YG
Sbjct:   32 ESTVMDIHLKLAQQQPDYVRLNPNMTVPTLVLPDRILDQSRDIAEYALGVGEATIDGDTKSWLDLHYGYPIEELTFGGLLARNPMARIMVPKRLESIHRRLLERAAQNPDLAKVYEERAAVFAGRIHTFDPEAVARLSERRRAEAVGFMDRLEQTLRDGRAVLVPPVYG 200          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A1H8VFY4_9PROT (Tetrachloro-p-hydroquinone reductive dehalogenase n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8VFY4_9PROT)

HSP 1 Score: 250 bits (639), Expect = 1.980e-81
Identity = 124/169 (73.37%), Postives = 148/169 (87.57%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E V VDIH ++ QQ+PDYVRLNP+MTVPTLVL DR+L QSRDIAEYAL   ++ +DG+TKAWLD+HYGYPIEELTFGG+LAR+PLAR+++P+RLE+TRR+LL  A +NPDLA VY+ARAAVFA RV  F+PD+VV+LSE+RR EAIGFMDRLE TL DGR VLVPPAYG
Sbjct:   38 EAVVVDIHLKMVQQRPDYVRLNPNMTVPTLVLPDRILDQSRDIAEYALGVSEATIDGDTKAWLDVHYGYPIEELTFGGLLARSPLARILVPRRLESTRRRLLERAKQNPDLAKVYDARAAVFAGRVRAFDPDSVVRLSEKRRAEAIGFMDRLEHTLGDGRGVLVPPAYG 206          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A512N9B2_9HYPH (Uncharacterized protein n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512N9B2_9HYPH)

HSP 1 Score: 238 bits (606), Expect = 1.670e-76
Identity = 120/169 (71.01%), Postives = 142/169 (84.02%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E V +DIH ++ QQ+PDYVRLNP+MTVPTLVL +R L QSRDIAEYAL   ++ LDG+T+AWLDLHYGY +E+LTFG +LA NPLAR++IPKRLEA RR+LL  AA+NPDLA VYEARA  FA R+  F+P AVV+L+E RR EAIGFMDRLEQTL DGRAV+VPPAYG
Sbjct:   32 ESVVIDIHLKMVQQRPDYVRLNPNMTVPTLVLPNRNLDQSRDIAEYALGVSEATLDGDTRAWLDLHYGYEVEQLTFGKLLATNPLARIVIPKRLEAVRRRLLKRAAQNPDLAKVYEARAEAFAARIRAFDPTAVVRLAETRRAEAIGFMDRLEQTLNDGRAVIVPPAYG 200          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A522GKX8_9HYPH (Glutathione S-transferase family protein n=1 Tax=Beijerinckiaceae bacterium TaxID=1978229 RepID=A0A522GKX8_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 3.500e-69
Identity = 114/169 (67.46%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E VFVDIH R SQQ+PDYVRLNP+MTVP+  L  R+L QSR+IAEYAL     ALD ETK W+DLHY YPIEELTFGG L+RNP+AR+MIP+ L A  R+LLA  A  PDLA VY+ARAAVFAERV  F+PD  V LS+ RR EAIGFMD++E  L DGR  LVPP YG
Sbjct:   33 ERVFVDIHLRASQQRPDYVRLNPNMTVPSPTLPGRILDQSRNIAEYALGVADGALDAETKFWVDLHYDYPIEELTFGGFLSRNPMARIMIPRMLAAAHRRLLARVAAYPDLAGVYKARAAVFAERVRVFDPDKAVHLSQTRRAEAIGFMDQIESHLADGRGTLVPPTYG 201          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A8F7WQZ7_9HYPH (Tetrachloro-P-hydroquinone reductive dehalogenase n=2 Tax=Methylovirgula sp. HY1 TaxID=2822761 RepID=A0A8F7WQZ7_9HYPH)

HSP 1 Score: 218 bits (555), Expect = 9.980e-69
Identity = 115/167 (68.86%), Postives = 132/167 (79.04%), Query Frame = 1
Query:    7 VFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            VF+DIH  +SQQ PDYVRLNP+MTVPTLVL  RVL QSRDIAE+AL     ALD ET+ WLDLHY YPI+ELTFGGIL+RNPLAR MIPK L  + R+LLA AA +PDLA  Y ARAA+FAER   F+PD  V+LS++RR EAI FM +LE  L DGRAV+VPPAYG
Sbjct:   35 VFMDIHVHMSQQLPDYVRLNPNMTVPTLVLPARVLDQSRDIAEFALGVSDVALDPETRRWLDLHYSYPIDELTFGGILSRNPLARFMIPKLLVKSHRRLLAMAAAHPDLAEAYNARAALFAERARIFDPDDAVRLSQKRRAEAIDFMSQLEHNLADGRAVIVPPAYG 201          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: UPI0003FED0A1 (glutathione S-transferase family protein n=1 Tax=Methylocapsa acidiphila TaxID=133552 RepID=UPI0003FED0A1)

HSP 1 Score: 217 bits (552), Expect = 3.220e-68
Identity = 112/169 (66.27%), Postives = 133/169 (78.70%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E VFVDIHFRL+Q+QPDYVRLNP+MTVPTLVLADRVL QSRDIAEYA    ++ L  + K+WLDLHY  PIEELTFG  LARNPLAR+MIPK L  + R+LL  A +NPDLA +Y+ARA VFAER+  F P A  +L++RRR +AI  +DR+E+ L DGRA L PPAYG
Sbjct:   38 EPVFVDIHFRLNQEQPDYVRLNPNMTVPTLVLADRVLDQSRDIAEYAFGVSEATLSADAKSWLDLHYALPIEELTFGTFLARNPLARLMIPKVLARSHRRLLERAVQNPDLAPLYQARAKVFAERLRIFSPAAAEQLADRRRAQAIDILDRMERALGDGRATLTPPAYG 206          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A2J7THJ1_METSI (GST N-terminal domain-containing protein n=1 Tax=Methylocella silvestris TaxID=199596 RepID=A0A2J7THJ1_METSI)

HSP 1 Score: 213 bits (542), Expect = 1.050e-66
Identity = 112/169 (66.27%), Postives = 129/169 (76.33%), Query Frame = 1
Query:    1 ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            E VFVDIHFRLSQ+QPDYVRLNP+MTVPTLVLADRVL QSRDIAEYA    ++ +  E KAWLDLHY  PIEELTFG  LAR+ LAR+M+PK L    R LL HAA  PDLA VY ARA VFA+R+  F+P A   L+ERRR +AI  ++R+E+ L DGRA L PPAYG
Sbjct:   38 ERVFVDIHFRLSQEQPDYVRLNPNMTVPTLVLADRVLDQSRDIAEYAFGVNEATVGAEAKAWLDLHYALPIEELTFGLFLARSRLARIMVPKVLARVHRHLLKHAAETPDLAAVYRARAEVFAKRLRIFDPAAAGPLAERRRAQAIDILERMERALSDGRATLTPPAYG 206          
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Match: A0A4U8Z5J3_METTU (Uncharacterized protein n=2 Tax=Methylocella tundrae TaxID=227605 RepID=A0A4U8Z5J3_METTU)

HSP 1 Score: 177 bits (448), Expect = 2.840e-53
Identity = 95/145 (65.52%), Postives = 109/145 (75.17%), Query Frame = 1
Query:   73 MTVPTLVLADRVLSQSRDIAEYAL---KSALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLAHAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLEQTLRDGRAVLVPPAYG 498
            MTVPTLVLADRVL QSRDIAEYAL   ++ L  E KAWLDLHY  PIEELTFG  LAR+ LAR+M+PK L    R+LL HAA NPDLA VY ARA VFAER+  F+P    +L+ERRR +AI  +DR+E+ L DGRA L PPAYG
Sbjct:    1 MTVPTLVLADRVLDQSRDIAEYALGVNEATLGAEAKAWLDLHYALPIEELTFGIFLARSRLARIMVPKVLARVHRRLLKHAAENPDLAAVYRARADVFAERLRIFDPATAGRLAERRRAQAIDILDRMERALSDGRATLTPPAYG 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59205.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
UPI001E456C523.290e-9486.75glutathione S-transferase family protein n=2 Tax=R... [more]
A0A259MQB3_9PROT4.190e-9083.13Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A1E4HPM8_9PROT8.570e-8474.56Uncharacterized protein n=4 Tax=Alphaproteobacteri... [more]
A0A1H8VFY4_9PROT1.980e-8173.37Tetrachloro-p-hydroquinone reductive dehalogenase ... [more]
A0A512N9B2_9HYPH1.670e-7671.01Uncharacterized protein n=1 Tax=Reyranella soli Ta... [more]
A0A522GKX8_9HYPH3.500e-6967.46Glutathione S-transferase family protein n=1 Tax=B... [more]
A0A8F7WQZ7_9HYPH9.980e-6968.86Tetrachloro-P-hydroquinone reductive dehalogenase ... [more]
UPI0003FED0A13.220e-6866.27glutathione S-transferase family protein n=1 Tax=M... [more]
A0A2J7THJ1_METSI1.050e-6666.27GST N-terminal domain-containing protein n=1 Tax=M... [more]
A0A4U8Z5J3_METTU2.840e-5365.52Uncharacterized protein n=2 Tax=Methylocella tundr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59205contigP-wetherbeei_contig59205:1..498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1205680.CAKO01000002_gene2511
Preferred namepcpC
PFAMsGST_C_2,GST_N
Model size498
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC01363
KEGG koko:K15241
KEGG ReactionR05402,R05403
KEGG Pathwayko00361,ko01100,ko01120,map00361,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.02e-80
EggNOG OGsCOG0625@1|root,COG0625@2|Bacteria,1N0A3@1224|Proteobacteria,2UIXQ@28211|Alphaproteobacteria
DescriptionGlutathione S-transferase, C-terminal domain
Cds size498
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186875.2718043-CDS-P-wetherbeei_contig59205:0..4981683186875.2718043-CDS-P-wetherbeei_contig59205:0..498Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59205 1..498 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59205.1.1prot_P-wetherbeei_contig59205.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59205 1..498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59205.1.1

>prot_P-wetherbeei_contig59205.1.1 ID=prot_P-wetherbeei_contig59205.1.1|Name=mRNA_P-wetherbeei_contig59205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
ECVFVDIHFRLSQQQPDYVRLNPDMTVPTLVLADRVLSQSRDIAEYALKS
ALDGETKAWLDLHYGYPIEELTFGGILARNPLARVMIPKRLEATRRQLLA
HAARNPDLATVYEARAAVFAERVSTFEPDAVVKLSERRRTEAIGFMDRLE
QTLRDGRAVLVPPAYG
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mRNA from alignment at P-wetherbeei_contig59205:1..498+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59205.1.1 ID=mRNA_P-wetherbeei_contig59205.1.1|Name=mRNA_P-wetherbeei_contig59205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59205:1..498+ (Phaeothamnion wetherbeei SAG_119_79)
GAGTGCGTCTTCGTCGACATCCATTTCCGCCTGAGCCAGCAGCAACCGGA TTATGTGCGGCTCAATCCGGACATGACGGTACCGACGCTGGTGCTGGCCG ATCGCGTCCTCAGTCAGAGTCGCGATATCGCCGAGTATGCGCTCAAGTCG GCGCTCGACGGTGAGACGAAAGCCTGGCTCGACCTTCACTACGGTTATCC GATCGAGGAATTGACCTTCGGCGGGATTCTCGCCCGCAATCCCCTCGCGC GGGTCATGATCCCGAAGCGGCTTGAGGCGACCCGCCGCCAACTCCTCGCG CATGCGGCCAGAAATCCCGATCTCGCGACCGTCTATGAGGCGCGCGCCGC GGTCTTTGCCGAGCGCGTCAGCACCTTCGAACCGGACGCCGTCGTAAAGC TTTCGGAGCGGCGTCGCACTGAGGCCATCGGCTTCATGGACCGGCTCGAG CAGACACTACGCGATGGCCGTGCAGTGTTGGTACCGCCCGCCTATGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59205:1..498+

>mRNA_P-wetherbeei_contig59205.1.1 ID=mRNA_P-wetherbeei_contig59205.1.1|Name=mRNA_P-wetherbeei_contig59205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59205:1..498+ (Phaeothamnion wetherbeei SAG_119_79)
GAGTGCGTCTTCGTCGACATCCATTTCCGCCTGAGCCAGCAGCAACCGGA
TTATGTGCGGCTCAATCCGGACATGACGGTACCGACGCTGGTGCTGGCCG
ATCGCGTCCTCAGTCAGAGTCGCGATATCGCCGAGTATGCGCTCAAGTCG
GCGCTCGACGGTGAGACGAAAGCCTGGCTCGACCTTCACTACGGTTATCC
GATCGAGGAATTGACCTTCGGCGGGATTCTCGCCCGCAATCCCCTCGCGC
GGGTCATGATCCCGAAGCGGCTTGAGGCGACCCGCCGCCAACTCCTCGCG
CATGCGGCCAGAAATCCCGATCTCGCGACCGTCTATGAGGCGCGCGCCGC
GGTCTTTGCCGAGCGCGTCAGCACCTTCGAACCGGACGCCGTCGTAAAGC
TTTCGGAGCGGCGTCGCACTGAGGCCATCGGCTTCATGGACCGGCTCGAG
CAGACACTACGCGATGGCCGTGCAGTGTTGGTACCGCCCGCCTATGGT
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