mRNA_P-wetherbeei_contig592.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig592.1.1
Unique NamemRNA_P-wetherbeei_contig592.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: D8LN21_ECTSI (Threonine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN21_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 3.290e-219
Identity = 327/497 (65.79%), Postives = 385/497 (77.46%), Query Frame = 1
Query:    1 SSEATMRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTD--DAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            SS +T  YCSTRGG+    FE+VVLGGLA D GL+VP+ +P +    +  WR L+FPELA +IMS++IS +EI S +L DL  RSAT F T++VTPVV+VG AWVLELFHGPTFAFKDVALQFLGNLFE+FL RRR  G +A   LTILGATSGDTGSAAIYGLRGK  V+CFIMFP GRVSEIQ ERQMTTV D NIHC+S++G+FDDCQ +VKAAFAD+ FREEV+LGAVNSINWARVLAQMTYYFWA+FRV++  +AA      GS    LS+SVPTGNFGD+LAGYYA+RMGLPV +L+VA NENDILHRFFSTG+YWREGV PTLAPSMDICVSSNFERYLFHL+ D+ +VL               GW++ FE TG+LT+EG+LL +AQ  F S+R+ TE+NLATI++ W +  YL CPHSS+GA AP    +    TVVLATAHPAKFP AV KVV  LP APEAL  L  LP   + +PNDL  V+ F+
Sbjct:   10 SSSSTTSYCSTRGGAKGVSFENVVLGGLAEDRGLYVPEVLPSVSAQELAEWRKLAFPELAFKIMSKYISTEEIPSDDLLDLCKRSATNFRTEEVTPVVRVGKAWVLELFHGPTFAFKDVALQFLGNLFEYFLLRRRAKGEEAG--LTILGATSGDTGSAAIYGLRGKAHVNCFIMFPEGRVSEIQ-ERQMTTVPDANIHCVSVEGSFDDCQDIVKAAFADKPFREEVKLGAVNSINWARVLAQMTYYFWAHFRVSEALEAAGEPLEEGSG---LSYSVPTGNFGDVLAGYYAKRMGLPVDRLVVAVNENDILHRFFSTGKYWREGVVPTLAPSMDICVSSNFERYLFHLSGDDGEVL--------------AGWLKSFEATGQLTLEGELLDQAQSAFSSSRVVTEDNLATIKQFWDEKSYLLCPHSSVGAKAPLQLGMPEGKTVVLATAHPAKFPDAVKKVVPDLPPAPEALQVLWDLPTRSTKMPNDLKKVEEFM 486          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A835Z4E7_9STRA (Threonine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E7_9STRA)

HSP 1 Score: 623 bits (1607), Expect = 1.540e-216
Identity = 323/490 (65.92%), Postives = 375/490 (76.53%), Query Frame = 1
Query:   16 MRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            ++Y STRGG     FEDVVLGGLA D GL+VP++VP +  D IESWR+LSF +LAH I+S+++S DEI S +L  L   S  +F + DVTPVVKVG  WVLEL+HGPTFAFKDVALQFLGNLFEFFL+RRR  G    A LTILGATSGDTGSAAIYG+RGK+ +DCFI+FP GRVS+IQ ERQMTTV D NIHC+S++G+FDDCQA+VKAAF D++FRE V LGAVNSINWARVLAQMTYYFWAYFRVTD      ++ G+    + FSVPTGNFGDILAGYY RRMGLP+ +LLVATNENDILHRFF++G+YWRE  + T++PSMDICVSSNFERYLFHLA D+ DVL                W   FE+TGKLT+EGDLLA+AQ  F SA +  EENLA I+  W  + YLFCPHSSIGAAAP H  L    TVVLATAHPAKFP AV  VV P+P AP  L RL+TLP  K  LPN LA VQ ++
Sbjct:    3 VKYRSTRGGHHGMSFEDVVLGGLATDKGLYVPESVPAVSADEIESWRSLSFADLAHAILSQYVSTDEIPSDDLRRLLHASYKSFRSPDVTPVVKVGGVWVLELWHGPTFAFKDVALQFLGNLFEFFLERRRARG--EQARLTILGATSGDTGSAAIYGMRGKKHMDCFILFPEGRVSQIQ-ERQMTTVEDTNIHCVSVEGSFDDCQAIVKAAFNDKEFRERVSLGAVNSINWARVLAQMTYYFWAYFRVTDQ----QDTKGAP---IHFSVPTGNFGDILAGYYCRRMGLPLGKLLVATNENDILHRFFTSGKYWREANKVTISPSMDICVSSNFERYLFHLAGDDTDVLSQ--------------WFADFEKTGKLTIEGDLLAKAQAEFVSASVAAEENLANIKHQWEKNQYLFCPHSSIGAAAPPHCDLPVTETVVLATAHPAKFPSAVGMVVTPMPPAPVELQRLYTLPTRKHQLPNSLAEVQGYM 468          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A7S3DNA6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNA6_9STRA)

HSP 1 Score: 535 bits (1378), Expect = 1.330e-182
Identity = 279/494 (56.48%), Postives = 343/494 (69.43%), Query Frame = 1
Query:    4 SEATMRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            S  ++ Y STRGG +N  F  VV+ GLA D GLFVP   P +  + IESWR+LS+P++A  ++S+F+ ED++ + +L D+  RS  AF + +VTPV+ VG  +VLELFHGPTFAFKDVALQ LGN FE+FL+     G      L +LGATSGDTGSAAI GLRGK+ VDC I+FP GRVS IQ ERQMTTV D NIHC++++GTFDDCQ LVKA+F    FR++V LGAVNSINW RVLAQ TYY+W+Y RVTD        N        FSVPTGNFGD+LAGYY++ MGLPV +L+VATNENDILHRFF+ G Y RE +  T++PSMDICVSSNFERYLFHLA ++A+ L               GWM+ FE T KLT++G+LLA+AQG F SAR  T   L TIR     H Y+ CPHS++G +A     L    TV LATAH  KFP AV + +DPLP  P  LA L +LP  ++ LPNDL AVQ F+
Sbjct:   29 SMTSVTYSSTRGGQTNLSFRSVVMQGLARDRGLFVPDEFPKVTMEEIESWRSLSYPDMAVEVISKFVKEDQVPAEKLKDIVHRSCAAFRSPEVTPVITVGGHYVLELFHGPTFAFKDVALQMLGNFFEYFLETGSNNG-----RLAVLGATSGDTGSAAISGLRGKKGVDCIILFPNGRVSAIQ-ERQMTTVPDSNIHCVAVEGTFDDCQDLVKASFNTPDFRDKVHLGAVNSINWCRVLAQTTYYYWSYLRVTDQQKDVKEVN--------FSVPTGNFGDVLAGYYSKLMGLPVGRLIVATNENDILHRFFTKGEYHREDIAKTISPSMDICVSSNFERYLFHLAGNDAEKL--------------AGWMKDFETTKKLTIDGELLAKAQGDFGSARADTAMTLDTIREYNEKHNYVLCPHSAVGVSAVHQLSLASLDTVCLATAHEGKFPAAVQRAIDPLPTPPAELAALESLPTRRTELPNDLQAVQNFV 494          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: B7G9C6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9C6_PHATC)

HSP 1 Score: 531 bits (1368), Expect = 5.120e-181
Identity = 276/493 (55.98%), Postives = 342/493 (69.37%), Query Frame = 1
Query:   13 TMRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFIRD 1491
            ++ Y STRGG +N  F DVV+ GLA+D GLFVP  +P +    +ESWR+LS+ ELA  ++++F+ +D++    L D+  RS  AF    VTP+V VG  +VLELFHGPTFAFKDVALQ LGN FE+FL      G      L +LGATSGDTGSAAI GLRGK+ + C I+FP GRVS IQ ERQMTTV D+N+HC++IDGTFDDCQ +VKA+F    FR++V LGAVNSINW RVLAQ TYY+W+Y RVTD             P + FSVPTGNFGD+LAGYYA++MGLPV +L+VATNENDILHRFF+ G Y RE +  T++PSMDICVSSNFERYLFHLA ++A +L                WMQ FE+TG+LT++GDLL +AQ  F S R  T + LATI      H Y+ CPHS++G  A     L  + TV LATAH AKFP AV++VV+P+P  P  LA L  LP  +  LPNDLA VQAF+ +
Sbjct:    3 SVTYSSTRGGQTNLAFRDVVMQGLAHDRGLFVPDRLPTVSTTELESWRSLSYAELAVNVIAKFVGDDQVPLPNLRDIVTRSCAAFRDAQVTPLVHVGGHYVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSNGG-----RLAVLGATSGDTGSAAIAGLRGKKGITCVILFPNGRVSAIQ-ERQMTTVPDENVHCVAIDGTFDDCQDIVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYLRVTDA--------HKDIPEVHFSVPTGNFGDVLAGYYAKQMGLPVGKLIVATNENDILHRFFTAGEYHRESIAETISPSMDICVSSNFERYLFHLAGNDASMLS--------------AWMQAFEKTGQLTIQGDLLRQAQADFDSCRGDTSQTLATIETYHQKHQYVLCPHSAVGVYAIHQLSLVSSATVCLATAHEAKFPAAVAQVVEPMPPPPTELAVLRDLPTRRVELPNDLATVQAFVEE 467          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A7S2NSM0_9STRA (Threonine synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSM0_9STRA)

HSP 1 Score: 527 bits (1358), Expect = 3.090e-179
Identity = 279/494 (56.48%), Postives = 343/494 (69.43%), Query Frame = 1
Query:   13 TMRYCSTRGGSS--NCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFIR 1488
            ++ Y STRG +S  +  F  VV+ GLA+D GLFVP  +P +  D IE+ R  ++ E+A  ++S+F+  D++   +L D+  RS  AF  +DVTPV+ V   +VLELFHGPTFAFKDVALQ LGN FE+FL+     G      L ILGATSGDTGSAAIYGLRGK+ +DC I++P GRVSEIQ ERQMTTV DDNIHC+S+DGTFDDCQ LVKAAF D  FR+EV LGAVNSINW RVLAQ TYY+W+Y RVTD    A         L+++SVPTGNFGDILAGYY+++MGLPV +L+VATNENDILHRFF+ G Y R  +Q T++PSMDICVSSNFERYLFHLA D+   L                W+  FE TGKLT+ G  L EA+  F SAR  T   LATI+     HGY+ CPHS++G +A     +  ++TV LATAH AKFP A S+ VDPLP  P  L++L+ LP   +  PNDLA VQAF+R
Sbjct:   14 SVTYSSTRGDASQKSLSFRQVVMQGLAHDRGLFVPDTMPEMSMDEIEALRGKTYAEVAVAVISKFVKPDQVPKDKLVDIVTRSCKAFRAEDVTPVIDVNGHFVLELFHGPTFAFKDVALQMLGNFFEYFLKTGSNDG-----RLAILGATSGDTGSAAIYGLRGKEGIDCVILYPKGRVSEIQ-ERQMTTVPDDNIHCVSVDGTFDDCQDLVKAAFRDASFRDEVHLGAVNSINWCRVLAQTTYYYWSYLRVTDKHPDAG--------LVNYSVPTGNFGDILAGYYSKKMGLPVGKLIVATNENDILHRFFTKGEYHRYDIQETISPSMDICVSSNFERYLFHLAGDDPATL--------------TSWINAFESTGKLTITGKKLEEARADFGSARADTTATLATIKEYNDKHGYMLCPHSAVGVSAIQQLDMVNSSTVCLATAHEAKFPAACSRAVDPLPTPPPELSKLYALPTRSTDCPNDLAVVQAFMR 479          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: W7TYE5_9STRA (Threonine synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE5_9STRA)

HSP 1 Score: 522 bits (1345), Expect = 6.460e-178
Identity = 287/496 (57.86%), Postives = 346/496 (69.76%), Query Frame = 1
Query:   10 ATMRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGA-AAPAHAKLDPATTVVLATAHPAKFPGAVSK--VVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFIR 1488
            A  RYCSTRG   N  FEDVVLGGLA D GL+VP+ +P L P  +++ R L+FP LA+ I+SRF+ E++I + +L D+  RS + F + DV+PV ++G AW+LELFHGPTFAFKDVALQ LGNLFE+FL +R      A A LTILGATSGDTGSAAIYGLRGK  V CFI++P GR S IQ ERQMTTV D N+ CI+++GTFDDCQ +VKAAF D  FREEV+LGAVNSINWARVLAQ+TYYFWAYFR+TD           S   LSFSVPTGNFGD+LAGYYA+RMGLPV QLLVATN NDILHRFF TG Y +  V  T +PSMDI +SSNFERYL+ LA  +  +L+               WM  FE TG+LT+ G LL  A+  F S R   E+ LATIR+   DHGYL CPHS++G  AA +   L    TV LATAHPAKFP A  +  +   LPA    LA L  +P+   +L NDL  VQ++++
Sbjct:    5 ARTRYCSTRGCVKNATFEDVVLGGLAPDRGLYVPEVLPTLTPVELQAMRCLTFPNLAYAIVSRFVGEEDIPAKDLKDIIDRSYSTFRSPDVSPVKQLGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRS----GAEAFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQ-ERQMTTVPDKNVQCIAVEGTFDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRITDF--------DPSIEQLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFVTGEYHKAEVTQTHSPSMDISISSNFERYLYELADRDHTLLKK--------------WMTNFEATGELTLSGQLLKRARQDFISGRGDEEQTLATIRKWHEDHGYLLCPHSAVGVHAADSLGMLRDGRTVCLATAHPAKFPEATERLGIESDLPAE---LAALADMPMRSILLHNDLVEVQSYVK 470          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A7S4SNE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SNE2_9STRA)

HSP 1 Score: 520 bits (1338), Expect = 3.720e-176
Identity = 280/494 (56.68%), Postives = 338/494 (68.42%), Query Frame = 1
Query:   13 TMRYCSTRGGSS--NCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAAN-SNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            ++ Y STRG S+  +  F DVV+ GLA+D GLFVP + P +  D IESWR LS+ +LA  ++S+++ ED+I    L D+ +RS  AF + +VTP+V++   WVLELFHGPTFAFKDVALQ LGN FE+FLQ     G     HLTILGATSGDTGSAAIYGLRGK+ VDC I+FP GRVS IQ ERQMTTV D NIHC+++DGTFDDCQ +VKA+F D  FRE V+LGAVNSINW RVLAQ TYYFW+Y RVTD        SNG     ++FSVPTGNFGDILAGYYA++MGLPV +L+VATNENDILHRFFS G Y R  +  +++PSMDICVSSNFERYL+HLA D+   L                WM+ FE TG+LT+ G  L  AQ  F SAR  T   L+TI+     H Y+ CPHS++G +A    K    +TV LATAH AKFP A S  V PLP  P  L+ L  +    S  PND   VQAF+
Sbjct:    6 SVTYSSTRGCSTQKHISFRDVVMRGLAHDRGLFVPDSFPTVTLDEIESWRFLSYSDLAVEVISKYVMEDQIPKETLRDIVSRSCAAFRSDEVTPLVEIDGHWVLELFHGPTFAFKDVALQMLGNFFEYFLQTGSNDG-----HLTILGATSGDTGSAAIYGLRGKKGVDCVILFPHGRVSAIQ-ERQMTTVPDSNIHCVAVDGTFDDCQDIVKASFGDADFRERVKLGAVNSINWCRVLAQTTYYFWSYLRVTDKYPNEVKASNG-----VNFSVPTGNFGDILAGYYAKKMGLPVGKLIVATNENDILHRFFSKGEYHRYDINKSISPSMDICVSSNFERYLYHLAGDDPTTLS--------------SWMKAFESTGQLTITGKKLEIAQADFLSARADTSMTLSTIKEYHEKHDYMLCPHSAVGVSAIQQLKEINHSTVCLATAHEAKFPDACSMAVKPLPTPPVELSSLKNMKTRSSRCPNDAKVVQAFV 474          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A7S2UCD3_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCD3_9STRA)

HSP 1 Score: 517 bits (1332), Expect = 1.570e-175
Identity = 266/491 (54.18%), Postives = 341/491 (69.45%), Query Frame = 1
Query:   13 TMRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            ++ Y STRGG     F  VV+ GLA D GL+VP ++P + P+ +E+WR+L + +LA +++ +F+ ED++   +L D+  RS  AF + +VTP+V VG   +LELFHGPTFAFKDVALQ LGN FE+FL+     G      LTILGATSGDTGSAAIYGLRGK+ VDCFI++P GRVSEIQ ERQMTTV DDNIHC++++GTFDDCQ +VKA+FAD +FR  V+LGAVNSINW RVLAQ TYY+W+Y R+TD+A+            +S SVPTGNFGDILAG+Y++ MGLP+ +L+VATNENDILHRFF+ G Y R  +  +++PSMDICVSSNFERYLFHLA ++A  L                WM  FE TGKLT++G  L +AQ  F SAR  T   LA I+  +  + Y+ CPHS++G +A    K+   TT+ LATAH AKFP AV   VDPLP  P+ L+ L  L +  +   NDL AVQ  +
Sbjct:    3 SVTYSSTRGGQKGLGFRQVVMAGLAEDRGLYVPDSIPTVTPEELEAWRSLCYSDLAVQVIRKFVDEDQVPLEKLTDIVTRSCAAFRSPEVTPIVDVGGHPILELFHGPTFAFKDVALQMLGNFFEYFLETGSNGG-----RLTILGATSGDTGSAAIYGLRGKKGVDCFILYPQGRVSEIQ-ERQMTTVPDDNIHCVAVEGTFDDCQDIVKASFADVEFRNRVKLGAVNSINWCRVLAQTTYYYWSYLRITDNASLKGEK-------ISCSVPTGNFGDILAGFYSKEMGLPIDKLIVATNENDILHRFFTKGEYHRHDIAKSISPSMDICVSSNFERYLFHLAGNDAAKLD--------------SWMTNFESTGKLTIDGGELKQAQEHFLSARADTATTLAVIQEYFQKYNYVLCPHSAVGVSAIQQLKMVSPTTICLATAHEAKFPDAVKMAVDPLPQPPKQLSILWDLKIRSTPCANDLTAVQKIV 466          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A6T5LU83_HETAK (Threonine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LU83_HETAK)

HSP 1 Score: 517 bits (1332), Expect = 2.710e-175
Identity = 292/512 (57.03%), Postives = 348/512 (67.97%), Query Frame = 1
Query:   19 RYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDA--WVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATT--VVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFIRDAAAADAL---GVGGAAA 1533
            +Y STRGG     FE+ V+ GLA D GLFVP++VP L  + IE WRAL F +LA  IM  +IS  EI   +L DL  RS   F + +VTPV +VG    + LELFHGPTFAFKDVALQFLGNLFE+FL R+        A LTI+GATSGDTGSAAIYGLRGK+ V+CFI+FPTG+VS IQ ERQMTTV D N+HC+S+ GTFDD Q +VKA+F D  FREEV +GAVNSINWARVLAQM+Y+F+AYFRVT+            K  +SFSVPTGN+GDILAGYYA+RMGL V QL+VATNENDILHRFF+TG+Y R     TLAPSMDICVSSNFERYLFHL+ D+A  L               GW   FE+TG+LTV GDLLA+AQ  F S     E+N+  I++ W ++ Y  CPH+ +GA    H +   A    VVLATA P KFP AV K + PLP  P  LA L  +P  K+ LPND   VQ F+R    +  +   G GGAAA
Sbjct:    7 KYKSTRGGQKGVGFEETVMTGLARDKGLFVPEDVPFLGMEKIEQWRALPFADLAFEIMKCYISPAEIPHEDLKDLVYRSTVNFRSDEVTPVREVGPGAPFFLELFHGPTFAFKDVALQFLGNLFEYFLGRK------PGAKLTIMGATSGDTGSAAIYGLRGKKNVNCFILFPTGKVSPIQ-ERQMTTVPDANVHCVSLAGTFDDAQDIVKASFNDAAFREEVSIGAVNSINWARVLAQMSYFFYAYFRVTERCPG--------KDEVSFSVPTGNYGDILAGYYAKRMGLKVKQLVVATNENDILHRFFTTGKYHRRAFIETLAPSMDICVSSNFERYLFHLSGDDAATL--------------AGWFAEFEKTGQLTVTGDLLAKAQSEFGSGSFRMEDNIKLIKQYWDEYRYALCPHTCVGAGV-VHGRPLAANEAMVVLATASPGKFPAAVGKAIQPLPRPPVQLAVLDRMPTRKTELPNDARTVQDFVRATLRSSGVAPAGQGGAAA 488          
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Match: A0A7S1Z2C3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2C3_TRICV)

HSP 1 Score: 514 bits (1323), Expect = 5.980e-174
Identity = 280/499 (56.11%), Postives = 341/499 (68.34%), Query Frame = 1
Query:    4 SEATMRYCSTRGGSS--NCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALSFPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWVLELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGDTGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDGTFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVTDDAAAAANSNGSSKPLL---SFSVPTGNFGDILAGYYARRMGLPVAQLLVATNENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVLRHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEENLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPGAVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFI 1485
            SE ++ Y STRG +S  +  F +VV+ GLA+D GLFVP  +P +  D +E WR L + ELA  ++++F+ +DE+    LAD+  RS  AF T DVTPVV VG   VLELFHGPTFAFKDVALQ LGN FE+FL      G      LT+LGATSGDTGSAAIYGLRGK+ VDC I++P GRVS IQ ERQMTTV DDNIHC++++GTFDDCQ LVKA+FAD  FRE V+LGAVNSINW RVLAQ TYYFW+Y RVTD             PL+   +FSVPTGNFGDILAGYYA+RMGLPV +L+VATNENDILHRFF+ G Y R  +  T++PSMDICVSSNFERYL+HLA ++   L                WM+ FE TG+LT+ G  L  A+  F S+R  T   L TI+R   ++ Y+ CPHS++G AA   A +    TV LATAH  KFP AV + VDPLP  P  L +L T+ V K+  PNDL A+Q  +
Sbjct:   32 SEKSITYSSTRGCASQRHLPFREVVMRGLAHDRGLFVPDALPTVTRDEVEGWRGLKYHELATEVIAKFVKDDEVPRDVLADIVKRSCDAFRTIDVTPVVDVGGHMVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSNGG-----RLTVLGATSGDTGSAAIYGLRGKKGVDCVILYPEGRVSAIQ-ERQMTTVPDDNIHCVAVEGTFDDCQDLVKASFADAAFRERVKLGAVNSINWCRVLAQTTYYFWSYLRVTD-----------KHPLIGEVNFSVPTGNFGDILAGYYAKRMGLPVGRLVVATNENDILHRFFTKGEYHRLDINKTISPSMDICVSSNFERYLYHLADEDPAAL--------------ADWMKAFESTGELTIAGRKLDRARKDFGSSRCDTAMTLETIKRYSDEYDYVLCPHSAVGVAAIHRAGMVNPGTVCLATAHEGKFPDAVKRAVDPLPDPPAELQKLWTMKVRKTNSPNDLKAIQDLV 499          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig592.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN21_ECTSI3.290e-21965.79Threonine synthase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835Z4E7_9STRA1.540e-21665.92Threonine synthase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S3DNA6_9STRA1.330e-18256.48Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7G9C6_PHATC5.120e-18155.98Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2NSM0_9STRA3.090e-17956.48Threonine synthase n=1 Tax=Leptocylindrus danicus ... [more]
W7TYE5_9STRA6.460e-17857.86Threonine synthase n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S4SNE2_9STRA3.720e-17656.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UCD3_9STRA1.570e-17554.18Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A6T5LU83_HETAK2.710e-17557.03Threonine synthase n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A7S1Z2C3_TRICV5.980e-17456.11Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig592contigP-wetherbeei_contig592:1001..6610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LN21
Preferred nameTHR4
PFAMsPALP,Thr_synth_N
Model size1905
Max annot lvl2759|Eukaryota
KEGG rclassRC00017,RC00526
KEGG koko:K01733
KEGG ReactionR01466,R05086
KEGG Pathwayko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230
KEGG ModuleM00018
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006520,GO:0006566,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016311,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons11
Evalue3.11e-220
EggNOG OGsCOG0498@1|root,KOG2616@2759|Eukaryota
Ec32 ortholog descriptionThreonine synthase
Ec32 orthologEc-13_002160.1
EC4.2.3.1
Description2-oxobutyrate metabolic process
Cds size1602
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig592.1.1prot_P-wetherbeei_contig592.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig592 1289..6595 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186874.9576573-UTR-P-wetherbeei_contig592:1000..12881683186874.9576573-UTR-P-wetherbeei_contig592:1000..1288Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig592 1001..1288 -
1683186875.108765-UTR-P-wetherbeei_contig592:6595..66101683186875.108765-UTR-P-wetherbeei_contig592:6595..6610Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig592 6596..6610 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186874.971188-CDS-P-wetherbeei_contig592:1288..15281683186874.971188-CDS-P-wetherbeei_contig592:1288..1528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 1289..1528 -
1683186874.9793706-CDS-P-wetherbeei_contig592:1872..19961683186874.9793706-CDS-P-wetherbeei_contig592:1872..1996Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 1873..1996 -
1683186874.9877074-CDS-P-wetherbeei_contig592:2325..24691683186874.9877074-CDS-P-wetherbeei_contig592:2325..2469Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 2326..2469 -
1683186874.9975076-CDS-P-wetherbeei_contig592:2769..29251683186874.9975076-CDS-P-wetherbeei_contig592:2769..2925Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 2770..2925 -
1683186875.01209-CDS-P-wetherbeei_contig592:3228..33741683186875.01209-CDS-P-wetherbeei_contig592:3228..3374Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 3229..3374 -
1683186875.0293567-CDS-P-wetherbeei_contig592:3681..38551683186875.0293567-CDS-P-wetherbeei_contig592:3681..3855Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 3682..3855 -
1683186875.0415304-CDS-P-wetherbeei_contig592:4114..41921683186875.0415304-CDS-P-wetherbeei_contig592:4114..4192Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 4115..4192 -
1683186875.0582123-CDS-P-wetherbeei_contig592:4591..46771683186875.0582123-CDS-P-wetherbeei_contig592:4591..4677Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 4592..4677 -
1683186875.0687752-CDS-P-wetherbeei_contig592:5010..52021683186875.0687752-CDS-P-wetherbeei_contig592:5010..5202Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 5011..5202 -
1683186875.0789044-CDS-P-wetherbeei_contig592:5976..61031683186875.0789044-CDS-P-wetherbeei_contig592:5976..6103Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 5977..6103 -
1683186875.0958638-CDS-P-wetherbeei_contig592:6460..65951683186875.0958638-CDS-P-wetherbeei_contig592:6460..6595Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig592 6461..6595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig592.1.1

>prot_P-wetherbeei_contig592.1.1 ID=prot_P-wetherbeei_contig592.1.1|Name=mRNA_P-wetherbeei_contig592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=534bp
MRYCSTRGGSSNCCFEDVVLGGLANDGGLFVPQNVPVLPPDVIESWRALS
FPELAHRIMSRFISEDEISSVELADLTARSATAFATKDVTPVVKVGDAWV
LELFHGPTFAFKDVALQFLGNLFEFFLQRRRRTGWDATAHLTILGATSGD
TGSAAIYGLRGKQFVDCFIMFPTGRVSEIQQERQMTTVADDNIHCISIDG
TFDDCQALVKAAFADEKFREEVQLGAVNSINWARVLAQMTYYFWAYFRVT
DDAAAAANSNGSSKPLLSFSVPTGNFGDILAGYYARRMGLPVAQLLVATN
ENDILHRFFSTGRYWREGVQPTLAPSMDICVSSNFERYLFHLAKDNADVL
RHVILFCCSGGIRRVGWMQGFERTGKLTVEGDLLAEAQGCFCSARITTEE
NLATIRRNWVDHGYLFCPHSSIGAAAPAHAKLDPATTVVLATAHPAKFPG
AVSKVVDPLPAAPEALARLHTLPVSKSVLPNDLAAVQAFIRDAAAADALG
VGGAAASKVCDYWVYVVCPRSFSLRRVFPFFKP*
back to top

mRNA from alignment at P-wetherbeei_contig592:1001..6610-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig592.1.1 ID=mRNA_P-wetherbeei_contig592.1.1|Name=mRNA_P-wetherbeei_contig592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5610bp|location=Sequence derived from alignment at P-wetherbeei_contig592:1001..6610- (Phaeothamnion wetherbeei SAG_119_79)
TCCAGCGAAGCAACCATGCGATACTGCAGCACCCGCGGCGGATCCAGCAA CTGTTGTTTCGAAGATGTGGTCCTCGGCGGGCTTGCCAACGACGGCGGGC TGTTCGTCCCGCAAAACGTCCCTGTCTTGCCACCTGATGTTATCGAGAGC GTAAGTGGGTTGGTCGTCTGGTACTTGGTGTTGTTGTCGCAGATTTATGA GGCAATATGAGCGCGGTTCGCCCGTTCTTTTGAGAATCATTTGCCCGGGA TATCAGCCGCGTGCAACGTTTTCTTCCCCTCTTTCTGAATCACACTTTTC CTCCTGCCTGGGGCCTCTCTGCGGTCAACTCCTGACGGGTTTCCTTCTTA CTGCTATTCAAAACATCTGCAACGGGCTCCAAAAATACCGCGCGGTTGCC ATTTCGGCGGCGACGGCGGCGCTGGACACTAATGGCGGCTGACGGTGTTG GTGGACGTCGGCCGCTGACGACGGTTGCTGCTGATGGCGCGGCGGCCGCT GCTGCAGTGGCGGGCGCTGAGCTTTCCGGAGCTGGCGCACCGGATCATGT CTCGCTTCATCTCGGAGGACGAAATCAGCTCGGTGGAGCTCGCGGACCTC ACCGCCCGCAGCGCGACCGCCTTTGCCACGAAAGGTGTGAAACGGAGGGA GGATTGACTTCGTGGAGTTGGTGGGGTCGCTGCAACCCCAGCAGCAAATG GTCGACAAGCCACTTTGGCTGCTCAAAGAAACAGATGGGGTTGTTTCATC TTTGGGACGGTCGTAAATGGTGACGAACAGGATTGGACCTTTCCTGATTT CAGTAGAGGGTAGGTTCCCGGTGTTGGTGGAGTACCGTTGCCATGTTTTC AGCTATTCAGAAAGAAGGTTTGCCTGCATTGCCCTTCATTGTCTTCCTCC TTTCTATCATGTTATTGCATTCATTGTGTATTCTTTCCGACTGTCGCAAT CCATCCCAAATCGGGTGTTTCCTCGCCATTTTTGTTGCTCTACATTTCTC TTGAGTCAGTCGCTCTGTACTTCCGCCCTCACACTTCGTCACGTGCGCCC CCGCGCTCGCCACGTCTCGCGCGCTCCCGTTTTCTCACGTACTCCCTCCC TCGTCCCTGCTTTTTCCTCCCTTTTGCACCGGCGCCCGGTGTGTGGTCCG ATCCGTCCACGCACCGTTTCTTCGTCGGCCCTGTCCCCGCCCGTGTCCAT ACTTCCGCTTTCCATGCCTGTTTGTACCGCGTATGTCCGCCCGCTGCGAC CCGATCTGTTCCGTCCCGTTTCGGTGGGACTGGCGGTGTTATAACCCCGG AAATGGTGAAACCCGGCGAAAACTGGCGAAAACCGGCGAAAACCGGCGAG AACCGGCCGGAAACCGGCCTGGCATATGGCGATGAATCGACCGACGGTGA AAACGCAGACGTGACGCCGGTGGTGAAGGTGGGCGACGCGTGGGTGCTGG AGCTCTTTCACGGCCCGACATTCGCCTTCAAGGACGTGGCGCTGCAGTTC CTCGGAAACCTTTTCGAGTTCTTTTTGCAGCGGCGGCGCCGGACCGGGTG GGATGCCACCGCTCACCTCACCATCCTTGGCGCCACCTCCGGCGACACCG GTAGGTTTTCTGTCGGCCGGCTTTTCCGGGTTTGTGCGGCGACGACGGGG TTTTTCTAAAACTGGCGGTTATCTGGCATTTTGGCACTGTTTGGATCGTT TGGTGGTTACGGTTCTCTGTAAGCGGCGTAAGCGGCGTTTCGGAAGCAAT TCTGGCAAAGCGGTGTTGGGAGGCGATTTGGGGGTGGAGGGATCGGACCG TGTTGACCCGGCTGGTTTGGGGTCGTGCTTTGTGCTGTTCGTTGCTGTGA TGCTAGTTAGTCCTCGCGAAGTCGTTTGCTCTCCTCTTTCTCGTCTTGCT ACATGCCTATTTTGTCCCCCTTCTTCGCGGCAGGCTCCGCGGCCATATAC GGGCTGCGCGGCAAGCAGTTCGTGGATTGCTTCATCATGTTCCCCACCGG TAGAGTATCGGAGATCCAGGTGAGTGAACTGGCGACATAACCGACAAGGG TAGCCGATAAGACTGATTTTGACGTTCTTCTTGTTCCCCTTCTCTCTCGG GTGATAACACTGCAATGTTCTGGGAAGCGACGAGGCATGCATTCTTCCCA CTCCGACGGCGGTCTGTGTTTGAACCACCCGCGATAAGACTGATTTTGAC GTTCTTCTTGTTCCCCTTCTCTCTCGGGTGATAACGCAATGTTCTGGGAA GCGACGAGGCATGGATTCTTCCCACTCCGACGGCGGTCTGTGTTTGAACC ACCCGTTTTGTGCGCGGGGCCCTTGTTTCTCCTCTGCCCGACCCATGATC AGTATCGCACAAGGAAACTCGTTTAACCTTTTCCTGTGTCGACTGGATTC TACTTTGGCGGGAGGGAGCAGGAGCGGCAGATGACGACGGTGGCGGACGA CAACATCCACTGCATCAGCATCGACGGCACGTTTGACGACTGTCAGGTAT GCAGGAGTAACCAGCCGGCACCGCTTCTTCTTCCTCCTTTTCTTACTTTT TCCTGAAAAAGCTCAGAGCTATCTGTAGCGCCGCTTATTGGCGATACCTT CAAAAGTGCGAAACTCTTTCCAACTTGCCGCCCTCGTGGTTTAGTGCCGT CGCCGCCATTGCCAGCTCTCCTGCGCACGCTCTACCGCCCGGAAGAACGC CGAAACCCGACTCCTGAACCCCCCCCCCCAAAAAAACCTACCCCCACGAT GACAGGCGCTGGTGAAGGCGGCCTTTGCAGACGAGAAGTTCCGCGAGGAA GTACAGCTGGGTGCCGTCAACTCGATCAACTGGGCGCGCGTCCTCGCTCA GATGACGTACTATTTCTGGGCCTACTTCCGGGTCACCGACGACGCTGCCG CCGCCGCCAACAGCAACGGCAGCTCCAAGGTAATTTTCAGTCTGTTTATA AGGTTCTTTTTCGGTACTGGCGGTTTTTGGTCCAGAAAAAAACGGCTTGT GGTACGACTGCCCATCCTTCAGGCTTTTCCGCTTCCTTGCGCGCAGAACC TTTGGCAGAAAACAAGATGCCTCTTTTTACTAACGTCTTCGTCTGCGGTT GGCTTTCACACCTTTCTCCGGCTCCTACTTTTGTGCACCTTGTCTCTATC TGACCTTGCGCGTGCTCGTCGCTCCCTGCCCACACCCGCTGGAACTACTG CCACCACCACGCTGTCACTGTCGACCGTTTTTGCAGCCGTTGCTAAGCTT CTCGGTCCCAACGGGTAACTTCGGAGACATCTTGGCGGGCTACTACGCGC GGCGGATGGGGCTGCCGGTGGCGCAGCTGCTGGTGGCCACCAATGAGAAC GACATCCTGCACCGTTTCTTCTCAACCGGCCGGTGAGCCACTTTTTTCTT GAATTCAGTTTAGTTCCGTTTTCTCTTGGGGTATGGACGGAGCGCGGGGC ATCGGCGAGACTGCGGACAGATAGAGGGAAATTTGAGCGCTGGCTGTATG ACGCTGTCACGGCTGACGACTGTGACTGTCGGCGCTCTCCGCTTTCGTTT TGGGTTGGACTTTAGTTGTTTTGTTGGTTTCAGACTTCGTCATCCTCTTC CCTAAACCCGCTTTTTGCGGCGGCTGCCTTGCCGCTGTCTCAACCACCGC CGCCGCTGTCCTGACTCGGTGTGGGCTCATTGCAGGTACTGGCGGGAGGG CGTTCAGCCGACGCTGGCGCCGTCGATGGATATCTGCGTCAGCAGCAATT TCGAGCGGTACCTCTTCCACCTCGCAAAGGACAACGCCGATGTCCTCAGG CATGTTATTTTATTCTGCTGCAGTGGTGGAATCAGAAGGGTGTTTTATGT GCTGGCGCGTCGCCATGGCGGCGGTGCGAATGATGCCGTTTTCTTGCTGT TTTGTCGACTGGATCGTCGAGGCGCCTGACGGCCGTAGCCGCAGTTTGCG TTCATCTTTCCAGGGCTGCCGCTCACTGGCCACCCCACTGGTTTGCGAGC TTTTCCTACCGCCACCATAACGCAGCATAATTGACTGACACGTTACCTTC CGCCTGCTGCGTGCCTGCGTCGCTACCACTGGCACTTCCTTCCGCTGCCC GCCGGTTTTCCCGCCCATTTGCTCGGCCCGTCTGCATGCAGGGGGTGGAT GCAGGGATTTGAGCGCACGGGCAAGCTGACCGTGGAGGGCGACCTGCTGG CAGAGGCACAGGGCTGTTTCTGCAGTGCGCGCATCACCACTGAGGAGAAC CTCGCCACCATCCGGAGGAATTGGGTGGACCACGGGTGCGTGCGCAGCGT GTCTGTGTCTCTCTACTAAAAGGATTTTATTGTGGTGATGTTTTGTTGTG GCTTTCCCCTCTGGCGTTTCGTCTCAGGTGGACAGCGCAAAGGAGTGTGC TTTTTAAGCCTTTCATAAGGCGTCTTTTCGCGGTTTCGGCTTTTGGTGCT GCTCTTGAGTAGAGGCGGTGGTGCTTCAAGCTGAAGCATAGAAGTGTTGG AATTGCCAAATGCACCGGCTTCCGCCTCTTCCCTGAGCACTCGCACGCGT TTTGTCTTTCTGTCGCCCGTTCCGCGGCACGGCACTGTACCCCACGGCGC CGCCTGCGCGGCAGGTACCTGTTTTGCCCGCACTCTTCTATCGGCGCTGC CGCCCCGGCGCATGCAAAGCTCGACCCAGCGACCACCGTGGTGCTCGCCA CGGCCCACCCGGCCAAGTTCCCTGGGGCCGTCTCCAAGGTGGCGCAAGCG GCGTCGTGGCAAGCGGCAGCCCGCTGCTCGTCTGTTTGCCGGTCTCTTTT GTCGTCGGCTTTTGCCTCAATCACTGGCGGCAATAGCGAGCTGCTTACTT TTTTATTTCTCGCTTGATCCGCCGAGGCGTTCTTCGACTTTGTTTTGTCC GAAGGAAAGCCGCTTGAGGGCGAGAAGCGAGCGTTTCGGCTTATTCTGCC CGGTTGTGGATAGAGGGTATGTATGCCTATTTACACTCTTATAGAAGGAG AAGAGCTGTTGCCCTTCACTCCTTTCTTCCGCTCATTCTTGCTCATGCCT ACTTCCCGTTTCTGGTTCACACCTGTGTGCAGGTGGTGGACCCGCTGCCG GCGGCGCCGGAGGCCCTAGCACGGCTGCATACGCTGCCGGTGAGCAAGTC GGTGCTGCCCAACGACCTCGCGGCCGTGCAGGCCTTCATCCGCGACGCCG CCGCCGCCGATGCCTTGGGGGTAGGAGGGGCAGCTGCCAGTAAGGTTTGT GACTATTGGGTTTATGTCGTCTGTCCGCGGTCTTTTTCGCTGCGTCGCGT TTTCCCCTTCTTTAAACCATAATCCATGCAATATGCCGATTCACGTTCCA GCCAGCTTTTCGGATGGATGGGCGCCCCGTTTCTGTTTACTTCTTGCGCT ACCAATGCGTCGTCTTTCTGGAAAGCAGGATTTGCTGACTCGACAGGCTC ACTTGGTCGGTCGGACTGATGCTCGCCTCATTTCACCTCTTTTCTCCGCC TGCAATGATCTCTTCTGCCGGCAGACGAATGGCAACGACAATTCCCAGAA CGGATGCCGATGCGGCAACGGCTGCCGCTGCAGCGCCTACAGCGGCGACA CGTGCGAATG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig592:1001..6610-

>mRNA_P-wetherbeei_contig592.1.1 ID=mRNA_P-wetherbeei_contig592.1.1|Name=mRNA_P-wetherbeei_contig592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1602bp|location=Sequence derived from alignment at P-wetherbeei_contig592:1001..6610- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGATACTGCAGCACCCGCGGCGGATCCAGCAACTGTTGTTTCGAAGA
TGTGGTCCTCGGCGGGCTTGCCAACGACGGCGGGCTGTTCGTCCCGCAAA
ACGTCCCTGTCTTGCCACCTGATGTTATCGAGAGCTGGCGGGCGCTGAGC
TTTCCGGAGCTGGCGCACCGGATCATGTCTCGCTTCATCTCGGAGGACGA
AATCAGCTCGGTGGAGCTCGCGGACCTCACCGCCCGCAGCGCGACCGCCT
TTGCCACGAAAGACGTGACGCCGGTGGTGAAGGTGGGCGACGCGTGGGTG
CTGGAGCTCTTTCACGGCCCGACATTCGCCTTCAAGGACGTGGCGCTGCA
GTTCCTCGGAAACCTTTTCGAGTTCTTTTTGCAGCGGCGGCGCCGGACCG
GGTGGGATGCCACCGCTCACCTCACCATCCTTGGCGCCACCTCCGGCGAC
ACCGGCTCCGCGGCCATATACGGGCTGCGCGGCAAGCAGTTCGTGGATTG
CTTCATCATGTTCCCCACCGGTAGAGTATCGGAGATCCAGCAGGAGCGGC
AGATGACGACGGTGGCGGACGACAACATCCACTGCATCAGCATCGACGGC
ACGTTTGACGACTGTCAGGCGCTGGTGAAGGCGGCCTTTGCAGACGAGAA
GTTCCGCGAGGAAGTACAGCTGGGTGCCGTCAACTCGATCAACTGGGCGC
GCGTCCTCGCTCAGATGACGTACTATTTCTGGGCCTACTTCCGGGTCACC
GACGACGCTGCCGCCGCCGCCAACAGCAACGGCAGCTCCAAGCCGTTGCT
AAGCTTCTCGGTCCCAACGGGTAACTTCGGAGACATCTTGGCGGGCTACT
ACGCGCGGCGGATGGGGCTGCCGGTGGCGCAGCTGCTGGTGGCCACCAAT
GAGAACGACATCCTGCACCGTTTCTTCTCAACCGGCCGGTACTGGCGGGA
GGGCGTTCAGCCGACGCTGGCGCCGTCGATGGATATCTGCGTCAGCAGCA
ATTTCGAGCGGTACCTCTTCCACCTCGCAAAGGACAACGCCGATGTCCTC
AGGCATGTTATTTTATTCTGCTGCAGTGGTGGAATCAGAAGGGTGGGGTG
GATGCAGGGATTTGAGCGCACGGGCAAGCTGACCGTGGAGGGCGACCTGC
TGGCAGAGGCACAGGGCTGTTTCTGCAGTGCGCGCATCACCACTGAGGAG
AACCTCGCCACCATCCGGAGGAATTGGGTGGACCACGGGTACCTGTTTTG
CCCGCACTCTTCTATCGGCGCTGCCGCCCCGGCGCATGCAAAGCTCGACC
CAGCGACCACCGTGGTGCTCGCCACGGCCCACCCGGCCAAGTTCCCTGGG
GCCGTCTCCAAGGTGGTGGACCCGCTGCCGGCGGCGCCGGAGGCCCTAGC
ACGGCTGCATACGCTGCCGGTGAGCAAGTCGGTGCTGCCCAACGACCTCG
CGGCCGTGCAGGCCTTCATCCGCGACGCCGCCGCCGCCGATGCCTTGGGG
GTAGGAGGGGCAGCTGCCAGTAAGGTTTGTGACTATTGGGTTTATGTCGT
CTGTCCGCGGTCTTTTTCGCTGCGTCGCGTTTTCCCCTTCTTTAAACCAT
AA
back to top