mRNA_P-wetherbeei_contig5904.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5904.3.1
Unique NamemRNA_P-wetherbeei_contig5904.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: B7FYW7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYW7_PHATC)

HSP 1 Score: 131 bits (330), Expect = 1.510e-32
Identity = 116/297 (39.06%), Postives = 145/297 (48.82%), Query Frame = 1
Query:    1 MAEGPPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEG-LTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYGTPGGATQPPAY--PQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDF-SQMPSLEKEREEAAAAAPA-----PVYSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGI 858
            MA+ P  G  ISL+S KNIRYEG+LYSI+  +A++AL+ VRS GTEGR A E  L  +   + VH F+ FRGQDIKDLHVHE  A      P PP          T  PA   P PAPT +     XXXX                P++   +  + +R+  G         PGTG +LL R++     G+                       GD       DFDF S +   +KE EEA  AA         Y+K  FFDSISCDA+D  SG+  R  GAEER LNT+TFG   +
Sbjct:    1 MAQNPLIGKNISLISKKNIRYEGVLYSINEQNATVALQNVRSFGTEGREATEQWLAFVGPSDDVHPFLMFRGQDIKDLHVHEAGAEAVTPAPPPPEP--------TSKPAVQAPIPAPTHSX---VXXXXAATTKPEAAPQNSATIPQKSMERGHNDNRRPRGKSGA----APGTGASLLNRKA----RGV--------------------VTEGDAVQPPRDDFDFQSNLEQFKKEDEEADEAAETLDRGPSAYAKDDFFDSISCDAIDKQSGVNNRLRGAEERSLNTETFGAVAL 258          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A7S2RDI4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDI4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.940e-25
Identity = 105/326 (32.21%), Postives = 135/326 (41.41%), Query Frame = 1
Query:    1 MAEGPPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGL-TEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYGTPGGATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXX-----------------------------PRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQMPSLEKEREEAAAAAPAPVYSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPRSSGR 882
            MA  P  GSRISL+S KNIRYEG LYSI+   A++AL+ VR+ GTEGR   +   T +  Q+ VH ++ FRG DIKDLHVHE A+ P              P   T PP  P    T APP+ T                                                 PR   R +   S    G  +     M GTG +LL R++     G+ G D                     +  +   D D     + E++     A +   VY+K  FFD ISCD LD  +G+  R  GA ER LNT+TFG   +   R  GR
Sbjct:    1 MAHNPLLGSRISLISKKNIRYEGTLYSINELDATVALQNVRAFGTEGREKIDPTCTFVSPQDAVHPYLLFRGCDIKDLHVHESASTPEI------------PTTDTPPPTDPAILSTSAPPEVTKQRGSGKNADPINKEREDAKKSNKDDNITNPEKTIPSSSKNAVKPSSQPPRIKSRDS---STNKKGRQIKSTQKMIGTGASLLNRKARGAVEGVEGPDQTHVGDFDFESNLAEFSKVNIIAGENDTDEDEEDDSNDEQDN---IAGSGTCVYTKDDFFDEISCDVLDKQNGIDNRLRGAAERSLNTETFGAVSLGTDRRGGR 308          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A1V9Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z4Q3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.510e-22
Identity = 115/348 (33.05%), Postives = 145/348 (41.67%), Query Frame = 1
Query:    4 AEGPPP-GSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYG------------------------------------TPGGATQPP-AYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQ-MPSLEKEREEAA-----AAAPAPV----YSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPRS--SGRGGG 891
            +EG P  GSRISL+S  +IRYEGLL++IDT  + +AL+ VRS GTEGR        IP  +TV  + TF+  +IKDLHV E AAP     P PP  Y                                      TPG  +    A P+P P                            P++ +  +    RQ   H    H  +PG G  LL R+    G   S                         E +++ DFDFS  +    KE+E        A A  PV    Y KSSFFD+ISCDALD   G+  R    EER+LNT+TFG  G+   RS   GR GG
Sbjct:    6 SEGIPYIGSRISLISKTDIRYEGLLFNIDTRQSMVALQNVRSFGTEGRRP----DHIPPSDTVLQYATFKASEIKDLHVCEAAAP---MPPPPPMQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPASSTLLTPGAMSNAQQAVPKPLPV-----------QQQSPASAVPELANVEPKQVQVNSTPSPRQPIRHEAESHRTIPGMGGHLLKRKERRIGGDTSM-----------------------TESELAADFDFSVGLHDFNKEQEYNKMSMDNADAVRPVLKGSYQKSSFFDTISCDALDRLEGVNGRMRAHEERKLNTETFGAVGLNNRRSYRGGRSGG 312          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A7S2JUH1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUH1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 8.360e-22
Identity = 102/315 (32.38%), Postives = 133/315 (42.22%), Query Frame = 1
Query:    1 MAEGPPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGL--TEIPAQETVHDFVTFRGQDIKDLHVHEPA--APPXXXVPLPPFAYYGT--PGGATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGH--------------VLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQMPSL---EKEREEAAAAAPAPV---YSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIK 861
            MA  P  GSRISL+S K+IRYEG LYSI+   A++AL+ VRS GTEGR   +    T IP Q TVH ++ FRG DIKDLHVHE A  A     VP  P     T  P  A +  +    A       P                       + +  A   S +G                      + + GTG +LL R+ +    G +                          P V +DFD     +    + E E+     P P+   Y K  FFD ISCD  D  +G+  R  GAEER++NT+TFG   +K
Sbjct:    1 MANNPLLGSRISLISKKDIRYEGTLYSINETDATVALQNVRSFGTEGREKRDDAAGTFIPPQATVHPYLLFRGMDIKDLHVHEKASDAAKKEDVPSDPAILSATAPPEVANKQASADSTAAKKKVDTPGNDDVFDKEPDTKPEKKTTKTLTKADSNASXSSAKGQREPSQXXXXXXXXXXXXXXXKNELVGTGASLLNRKVLGTVDGEA--------------------------PKVGEDFDLESATAKFDKDAEYEQINGENPEPIESSYKKDDFFDEISCDVTDKMNGVHTRLRGAEERKVNTETFGAVSLK 289          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A1Z5JPN3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPN3_FISSO)

HSP 1 Score: 103 bits (257), Expect = 8.770e-22
Identity = 122/298 (40.94%), Postives = 145/298 (48.66%), Query Frame = 1
Query:   13 PPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAE-GLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYGTPGGATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQMPSLEKEREEAA---AAAPAPVYSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPRSSGRGG 888
            P  G RISLVS KNIRYEG+LYSI+  +A++AL+ V++ GTEGR  AE G   +   +TVH ++ FRGQDIKDLHVHE  A         P                    P     QP XXXXXXXXXXXXXXXXXXXX            R  +          PGTG +LL R +     G+ G                              +FDF    SLEK +E++           Y K  FFDSISCDALD  SG   R  GAEERRLNT+TFG   +   +S  RGG
Sbjct:    4 PLLGKRISLVSKKNIRYEGVLYSINEQNATVALQNVKTFGTEGRELAEEGCIFVAPADTVHPYLLFRGQDIKDLHVHEQPAEEQPTQTTEPXXXXXXXXXXXXXXXXXXXPPAA---QPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARNSKAA------PGTGASLLNRTA----RGVVGDTATPQG-----------------------EFDFQS--SLEKFKEQSDDNDEPIAETAYEKDDFFDSISCDALDKQSGTDNRLKGAEERRLNTETFGAVALNT-QSRRRGG 262          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.650e-21
Identity = 110/313 (35.14%), Postives = 141/313 (45.05%), Query Frame = 1
Query:   22 GSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGLTEIPAQETVHDFVTFRGQDIKDLHVHE-PAAPPXXXVPLPPFAYYGTPGGATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLG--GHHPMPG----TGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDF-SQMPSLEKEREE--------AAAAAPA-----------------PVYSKSSFFDSISCDALDSGLGR-RFGGAEERRLNTDTFGVAGI 858
            GSRISL+S K+IRYEG+LY ID  ++S+ L+ V+S GTE R   EG  ++PA + +   + FRGQDIKDLHVH+ PA  P    P+        P GA  PP    P P     Q                      P    +  G G R G     G  G H +PG    TG+ L+ R +  GG GI+                        VE   S++FDF + +   +K+ E         AA AA                     Y+KSSFFD ISCDALD   GR R  G  ER+LNT+TFG  G+
Sbjct:    8 GSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRV--EG-PQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPM-----VAPPPGALGPP----PVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEG-GKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPN-RGGGGIA------------------------VE---SEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALD---GRHRVPGFTERKLNTETFGATGV 276          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A3R7GHF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GHF0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.870e-21
Identity = 103/320 (32.19%), Postives = 136/320 (42.50%), Query Frame = 1
Query:   13 PPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYGTPGG-----------------ATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQ-MPSLEKERE-----EAAAAAPAPVYSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPRS--SGRGGG 891
            P  GSRISLVS  +IRYEG L++IDT  +++AL++VRS GTEGR        +P    +  + TF+  +IKDLHV E AAPP      P                           A   P    PAP     +PT                     +   +Q     ++ HG        +PG G  LL R+     SG  G                     G    D S +F+F++ +   +K++E     E         Y KSSFFD+ISCDALD   G   R  GAEER+LNT+TFG  G+   R+   GRG G
Sbjct:   21 PYLGSRISLVSKTDIRYEGFLFNIDTRQSTVALQSVRSFGTEGRRP----EHVPPSPHILQYATFKASEIKDLHVCE-AAPPQAPQGYPAXXXXXXXXXXXXXXXXXXXXXXXXXMAPSAPLVQAPAPVSTGSKPTLLTPGSVSSAQKQEKTPAPVQQVQMQQQVQVHQRRHGQQSNAARTIPGMGGHLLKRKERRVPSGAEGA--------------------GVGPDDASGEFNFAEGLNDFDKQQEFSKLEENTKTESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRGRG 315          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A484E5S7_BRELC (TFG domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5S7_BRELC)

HSP 1 Score: 100 bits (248), Expect = 1.820e-20
Identity = 98/302 (32.45%), Postives = 131/302 (43.38%), Query Frame = 1
Query:   13 PPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXXVPLPPFAYYGTPGGATQPPAYPQPAPTVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQ-MPSLEKERE-----EAAAAAPAPVYSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPRS-SGRGGG 891
            P  GSRISLVS  ++RYEG L++IDT  + +AL+ VRS GTEGR A      +P    V  + TF+  +IKDLHV E A  P      PP            PP     AP  +P +PT                     R +  ++   ++            +PG G  LL R+      G  G                       V    S +F+F + +   +K++E     E+        Y KS FFD+ISCDALD   G   R  GAEER+LNT+TFG  G+   R+  GRG G
Sbjct:   19 PYLGSRISLVSKTDVRYEGFLFNIDTRQSIVALQNVRSFGTEGRRA----DHVPPSPHVLQYATFKAAEIKDLHVCEAAPQPPAN---PPXXXXXXXXXXXSPPVV---APA-SPRKPTLLTPGSVSSAHNETPEPTPARRHNSNRSAQSNQA---------RTIPGMGGHLLKRKERRAPGGTEGTKV--------------------VPEAASGEFNFEERLHDFDKQQEFVKLEESTKKDSKGSYQKSMFFDTISCDALDRLEGQRSRMSGAEERKLNTETFGAVGLNNRRNLRGRGRG 280          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A067CA65_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA65_SAPPC)

HSP 1 Score: 101 bits (251), Expect = 1.910e-20
Identity = 111/325 (34.15%), Postives = 143/325 (44.00%), Query Frame = 1
Query:    4 AEGPPP-GSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAEGLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPXXX--------------------VPLPPFAYYGTPGGATQPP-AYPQPAP--TVAPPQPTXXXXXXXXXXXXXXXXXXXXPRRDERQAGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGXDXXXXXXXXXXXXXXXXXXXGDVEPDVSKDFDFSQ-MPSLEKEREEAA-----AAAPAPV----YSKSSFFDSISCDALD--SGLGRRFGGAEERRLNTDTFGVAGIKPPR 870
            +EG P  GSRISL+S  +IRYEGLL++IDT  + +AL+ VRS GTEGR        IP  +TV  + TF+  +IKDLHV E A   XXX                    +P  P     T    T P  AY  PA   T+  P                       PR+ ERQ         G   GG+  +PG G  LL R+    G+                         G  + +++ +FDF+  +    KE E +      A A  PV    Y KSSFFD+ISCDALD   G+  R    EER+LNT+TFG  G+   R
Sbjct:    6 SEGIPYIGSRISLISKTDIRYEGLLFNIDTRQSMVALQNVRSFGTEGRRP----DHIPPSDTVLQYATFKASEIKDLHVCEAAXXXXXXXXXXXXXXXXXXXXXXXXXXLPRQPEVAQPTAARPTSPTNAYAAPATSSTLLTPGAMSTAHSVAAQQVQQQQQHAPSPRQPERQD-------QGAQNGGNRTIPGMGGHLLKRKERRVGADT-----------------------GMTDSEIAAEFDFAVGLTDFNKEDEYSKMSMTNAEAVRPVIKGSYQKSSFFDTISCDALDRLEGVNGRLRAHEERKLNTETFGAVGLNNRR 296          
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Match: A0A7S0XMA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XMA5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.090e-19
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 1
Query:    1 MAEGPPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAAAE--GLTE-IPAQETVHDFVTFRGQDIKDLHVHEPAAPP 258
            MA  P  G+RISL+S KNIRYEG+LYSI+ + A++AL+ V+S GTEGR   +  G T  +P Q+TVH ++ FRGQDIKDLHVHE    P
Sbjct:    1 MASNPLIGNRISLISKKNIRYEGVLYSINESDATVALQDVKSFGTEGRELLDTTGQTNFVPPQDTVHTYLLFRGQDIKDLHVHEKQGTP 89          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5904.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7FYW7_PHATC1.510e-3239.06Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2RDI4_9STRA1.940e-2532.21Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1V9Z4Q3_9STRA4.510e-2233.05Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2JUH1_9STRA8.360e-2232.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5JPN3_FISSO8.770e-2240.94Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A836C876_9STRA1.650e-2135.14Scd6-like Sm domain-containing protein n=1 Tax=Tri... [more]
A0A3R7GHF0_9STRA1.870e-2132.19Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A484E5S7_BRELC1.820e-2032.45TFG domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A067CA65_SAPPC1.910e-2034.15Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S0XMA5_9STRA2.090e-1957.30Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5904contigP-wetherbeei_contig5904:2260..3630 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2850.Phatr45848
Model size1008
Max annot lvl2836|Bacillariophyta
KEGG koko:K18749
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.48e-33
EggNOG OGsKOG1073@1|root,KOG1073@2759|Eukaryota,2XH3Z@2836|Bacillariophyta
DescriptionFDF
Cds size1008
COG categoryS
BRITEko00000,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186873.284451-CDS-P-wetherbeei_contig5904:2259..26481683186873.284451-CDS-P-wetherbeei_contig5904:2259..2648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5904 2260..2648 +
1683186873.298478-CDS-P-wetherbeei_contig5904:3011..36301683186873.298478-CDS-P-wetherbeei_contig5904:3011..3630Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5904 3012..3630 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5904.3.1prot_P-wetherbeei_contig5904.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5904 2260..3630 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5904.3.1

>prot_P-wetherbeei_contig5904.3.1 ID=prot_P-wetherbeei_contig5904.3.1|Name=mRNA_P-wetherbeei_contig5904.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
MAEGPPPGSRISLVSNKNIRYEGLLYSIDTASASLALRAVRSMGTEGRAA
AEGLTEIPAQETVHDFVTFRGQDIKDLHVHEPAAPPPPPVPLPPFAYYGT
PGGATQPPAYPQPAPTVAPPQPTQPAAAAAAGSGGSGSAGGAGPRRDERQ
AGHGSRQGHGHVLGGHHPMPGTGEALLGRQSITGGSGISGGDGGNSGGQG
GGGGGGGGRGGGDVEPDVSKDFDFSQMPSLEKEREEAAAAAPAPVYSKSS
FFDSISCDALDSGLGRRFGGAEERRLNTDTFGVAGIKPPRSSGRGGGGRG
GGGRGGGSGGGGGRGYRGGGGSGGGGGGGGNASAAS
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mRNA from alignment at P-wetherbeei_contig5904:2260..3630+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5904.3.1 ID=mRNA_P-wetherbeei_contig5904.3.1|Name=mRNA_P-wetherbeei_contig5904.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1371bp|location=Sequence derived from alignment at P-wetherbeei_contig5904:2260..3630+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGAAGGGCCACCGCCTGGCTCGCGGATCAGCCTCGTCTCCAACAA AAACATTCGTTATGAGGGCCTGCTCTACTCCATCGACACCGCCTCCGCCT CGCTTGCCCTGCGGGCGGTGCGGAGCATGGGCACCGAAGGGAGAGCGGCA GCAGAAGGATTAACTGAGATCCCAGCGCAAGAGACGGTGCACGACTTCGT CACGTTCCGCGGCCAAGACATCAAGGACTTGCACGTCCACGAGCCTGCAG CGCCTCCACCGCCTCCGGTGCCGTTGCCGCCGTTTGCGTACTACGGAACA CCCGGAGGTGCGACGCAGCCACCAGCGTACCCGCAACCAGCACCGACAGT CGCACCACCGCAGCCCACTCAGCCGGCGGCAGCGGCGGCGTGGGTTGCCC AGCAGCAGCCGCCAGTTCCTGCGATTGCGGCGGAGGCGTCAAAGGTATCG CCGTCATCCCCACAGAAATTCCAAAAGCCGGCACAGCCGCAGGCCCAGAC ACAGGCGAAGGCAGCGACGCCGCCGCGACAGGCGGGAGTAGCGGCGGCGG TGCCGGCGGCGGCGGCGGCGGCGGCGATGGCAGTGACGGCGACGGTGGCG GCGCCGCGACAACAGCCTTTGCCGCAGCAGCGGCAGCAACCGCAACCGCA GCCGCCGCAGCAGCAGCAGCAGCAGAGCGCCCGCTCCGGGCAGAACTCGC GCCGCCGGGGAACGCCGGCACAGGGGCAAGGACAGGGTCGCAGCGGCCGC AGCGCGGGTAGTGGCGGCAGCGGCAGCGCCGGCGGCGCCGGGCCGCGGCG GGATGAGCGACAGGCAGGCCATGGTAGCCGCCAGGGCCACGGGCATGTGC TGGGCGGCCACCACCCGATGCCCGGCACCGGCGAGGCGCTGCTCGGACGG CAAAGCATCACCGGCGGCAGCGGCATCAGCGGCGGCGACGGCGGCAACAG CGGCGGCCAGGGTGGTGGCGGCGGCGGTGGTGGCGGCCGTGGCGGCGGTG ACGTCGAACCCGACGTCTCGAAGGACTTTGATTTCTCACAGATGCCCAGC CTGGAGAAAGAGCGCGAGGAGGCGGCGGCGGCGGCACCGGCTCCCGTCTA CTCCAAGTCATCGTTCTTCGACTCCATCAGCTGCGACGCGCTCGACTCGG GCCTCGGCCGGCGCTTCGGCGGCGCGGAGGAGCGGCGCCTCAACACGGAC ACGTTTGGCGTCGCGGGCATCAAGCCGCCGCGCTCCAGCGGTCGCGGCGG CGGCGGACGCGGCGGTGGTGGCCGCGGCGGCGGAAGCGGCGGCGGCGGAG GAAGAGGCTACCGTGGCGGCGGCGGCAGCGGCGGAGGCGGTGGCGGCGGC GGGAATGCCTCTGCCGCTTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5904:2260..3630+

>mRNA_P-wetherbeei_contig5904.3.1 ID=mRNA_P-wetherbeei_contig5904.3.1|Name=mRNA_P-wetherbeei_contig5904.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig5904:2260..3630+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGAAGGGCCACCGCCTGGCTCGCGGATCAGCCTCGTCTCCAACAA
AAACATTCGTTATGAGGGCCTGCTCTACTCCATCGACACCGCCTCCGCCT
CGCTTGCCCTGCGGGCGGTGCGGAGCATGGGCACCGAAGGGAGAGCGGCA
GCAGAAGGATTAACTGAGATCCCAGCGCAAGAGACGGTGCACGACTTCGT
CACGTTCCGCGGCCAAGACATCAAGGACTTGCACGTCCACGAGCCTGCAG
CGCCTCCACCGCCTCCGGTGCCGTTGCCGCCGTTTGCGTACTACGGAACA
CCCGGAGGTGCGACGCAGCCACCAGCGTACCCGCAACCAGCACCGACAGT
CGCACCACCGCAGCCCACTCAGCCGGCGGCAGCGGCGGCCGCGGGTAGTG
GCGGCAGCGGCAGCGCCGGCGGCGCCGGGCCGCGGCGGGATGAGCGACAG
GCAGGCCATGGTAGCCGCCAGGGCCACGGGCATGTGCTGGGCGGCCACCA
CCCGATGCCCGGCACCGGCGAGGCGCTGCTCGGACGGCAAAGCATCACCG
GCGGCAGCGGCATCAGCGGCGGCGACGGCGGCAACAGCGGCGGCCAGGGT
GGTGGCGGCGGCGGTGGTGGCGGCCGTGGCGGCGGTGACGTCGAACCCGA
CGTCTCGAAGGACTTTGATTTCTCACAGATGCCCAGCCTGGAGAAAGAGC
GCGAGGAGGCGGCGGCGGCGGCACCGGCTCCCGTCTACTCCAAGTCATCG
TTCTTCGACTCCATCAGCTGCGACGCGCTCGACTCGGGCCTCGGCCGGCG
CTTCGGCGGCGCGGAGGAGCGGCGCCTCAACACGGACACGTTTGGCGTCG
CGGGCATCAAGCCGCCGCGCTCCAGCGGTCGCGGCGGCGGCGGACGCGGC
GGTGGTGGCCGCGGCGGCGGAAGCGGCGGCGGCGGAGGAAGAGGCTACCG
TGGCGGCGGCGGCAGCGGCGGAGGCGGTGGCGGCGGCGGGAATGCCTCTG
CCGCTTCG
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