mRNA_P-wetherbeei_contig59032.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59032.1.1
Unique NamemRNA_P-wetherbeei_contig59032.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A7Y4XSR2_9BACT (Amidohydrolase n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XSR2_9BACT)

HSP 1 Score: 261 bits (666), Expect = 2.910e-82
Identity = 121/163 (74.23%), Postives = 140/163 (85.89%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T++IDLKG TM PGFIE H H MG+GY+E+ LDLM +KSYDEL+ KVK+AVAK QPGQWILGRGWHQDKW+ KP+K+VKGFQTH+LLS VSPNNPV L HASGHAAFANAKAM+IAGVN LS EKL++  GEGGEIIRD+LGNPTGIFNE +  L +  IPE+
Sbjct:   35 TEMIDLKGATMTPGFIESHGHIMGLGYTELRLDLMYIKSYDELIQKVKEAVAKAQPGQWILGRGWHQDKWDKKPEKIVKGFQTHDLLSEVSPNNPVFLSHASGHAAFANAKAMQIAGVNQLSIEKLESNLGEGGEIIRDQLGNPTGIFNERAQGLISKFIPEN 197          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A401UA46_9BACT (Amidohydrolase n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UA46_9BACT)

HSP 1 Score: 261 bits (668), Expect = 3.550e-82
Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T++I+L+G  M PGFIEGH H MG+GY+E+NLDLMNVKSY+E+V KVK+AVAK QPGQWILGRGWHQDKW+VKPDKMVKGFQTH+LLS  SPNNPV L HASGHAA AN KAME+AGVN LSKE L   + +GGEII+DELGNPTGIFNE +M+L  + IPE+
Sbjct:   69 TEVINLEGKIMTPGFIEGHGHIMGVGYNELNLDLMNVKSYEEMVEKVKEAVAKAQPGQWILGRGWHQDKWDVKPDKMVKGFQTHQLLSEASPNNPVFLRHASGHAAIANEKAMELAGVNQLSKEALSQTSEDGGEIIKDELGNPTGIFNERAMTLVASKIPEN 231          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A1M5LG07_9BACT (Amidohydro_3 domain-containing protein n=2 Tax=Chryseolinea TaxID=1433993 RepID=A0A1M5LG07_9BACT)

HSP 1 Score: 259 bits (663), Expect = 1.930e-81
Identity = 117/163 (71.78%), Postives = 140/163 (85.89%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T +I+L+G T+ PGFIEGH H MG+GY+E+NLDLM+VKS+DE+VA+VKDAV+K QPGQWI+GRGWHQDKW+VKP KMVKGF  H+ LS+VSPNNPV L HASGHA FANAKAMEIAGVN LS EKLK +  EGGEI+RDE+GNPTG+FNE + SL   HIP++
Sbjct:   70 TTVINLEGKTLTPGFIEGHGHIMGVGYNELNLDLMDVKSFDEIVARVKDAVSKAQPGQWIVGRGWHQDKWDVKPAKMVKGFPLHQALSAVSPNNPVFLRHASGHAGFANAKAMEIAGVNQLSPEKLKKEQNEGGEILRDEMGNPTGLFNERAQSLIADHIPDN 232          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: UPI00191EEF33 (amidohydrolase n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191EEF33)

HSP 1 Score: 259 bits (663), Expect = 2.070e-81
Identity = 118/161 (73.29%), Postives = 136/161 (84.47%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIP 483
            T +IDLKG TM PGFIEGH H MGIGY+E+NLDLM+ KS+DE+VA+VK+A +K QPGQWI+GRGWHQDKW+VKP+KMVKGF  H+ LS  SPNNPV L HASGHA FANAKAMEIAGVN LS EKLK++  EGGEI+RDELGNPTG+FNE + SL   HIP
Sbjct:   71 TNVIDLKGKTMTPGFIEGHGHIMGIGYNELNLDLMDAKSFDEIVARVKEAASKAQPGQWIVGRGWHQDKWDVKPEKMVKGFPLHQKLSEASPNNPVFLRHASGHAGFANAKAMEIAGVNQLSAEKLKHEQNEGGEILRDELGNPTGLFNERAQSLIADHIP 231          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A136M1B7_9BACT (Amidohydrolase n=1 Tax=Bacteroidetes bacterium OLB12 TaxID=1619897 RepID=A0A136M1B7_9BACT)

HSP 1 Score: 256 bits (653), Expect = 1.030e-80
Identity = 116/163 (71.17%), Postives = 134/163 (82.21%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T +IDL G TM PGFIEGH HFMG+GYSE+NLDLM+V SY+E+V KVK+AVAK QPGQWI+GRGWHQDKW  KP+K +KGFQTH LLS  SP+NPV L HASGHA FANAKAM++AGVN LS EKL    GEGGEI+ DELGNPTG+FNE +  L T HIP++
Sbjct:   72 TTVIDLAGKTMTPGFIEGHGHFMGLGYSELNLDLMSVTSYEEMVEKVKEAVAKAQPGQWIIGRGWHQDKWTKKPEKQIKGFQTHHLLSEASPDNPVFLSHASGHAGFANAKAMQLAGVNQLSVEKLSRNLGEGGEILLDELGNPTGLFNERAQYLITQHIPDN 234          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A7Y4QWL5_9BACT (Amidohydrolase n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4QWL5_9BACT)

HSP 1 Score: 256 bits (655), Expect = 3.240e-80
Identity = 118/161 (73.29%), Postives = 137/161 (85.09%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIP 483
            T+++DLKG  + PG+IEGH HFMG+G++E+ LDLMNVKSY+ELV KVK+AVAK +PGQWILGRGWHQDKW+ KP KMVKGFQTHELLS+VSPNNPV L HASGHA FANAKAM++AGVN LS EKL     EGGEII+DELGNPTGIFNE + SL   +IP
Sbjct:   70 TQMLDLKGKVLTPGWIEGHGHFMGLGFTELELDLMNVKSYEELVEKVKEAVAKAKPGQWILGRGWHQDKWDQKPSKMVKGFQTHELLSAVSPNNPVFLRHASGHAGFANAKAMQMAGVNQLSLEKLSKDMNEGGEIIKDELGNPTGIFNERAQSLIAKYIP 230          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A1T5K4A3_9BACT (Amidohydro_3 domain-containing protein n=1 Tax=Ohtaekwangia koreensis TaxID=688867 RepID=A0A1T5K4A3_9BACT)

HSP 1 Score: 251 bits (642), Expect = 2.680e-78
Identity = 114/163 (69.94%), Postives = 140/163 (85.89%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T++IDL+G TM PGFIEGHAH  G+GY+E+NLDLMN+K++DELV KV++AV K +PGQWI+GRGWHQDKW+VKP+K+VKGF  H  LS VSP+NPV L+H+SGHAA ANAKAMEIAGV+LLSKE +     EGGEIIRDELGNPTG+FNE +M+L + +IPES
Sbjct:   70 TQLIDLEGRTMTPGFIEGHAHMFGVGYNELNLDLMNIKNFDELVQKVEEAVHKAKPGQWIVGRGWHQDKWDVKPEKIVKGFPVHNKLSEVSPDNPVFLWHSSGHAALANAKAMEIAGVSLLSKENIAQGNTEGGEIIRDELGNPTGLFNERAMTLISKNIPES 232          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A355BQK9_9BACT (Amidohydrolase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A355BQK9_9BACT)

HSP 1 Score: 251 bits (640), Expect = 4.740e-78
Identity = 119/163 (73.01%), Postives = 138/163 (84.66%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T++IDL+G+TM PGFIE H H MG+GY E+NLDL  VKS+DELV KV+ A A+  PGQWILG GWHQDKW VKP+KMVKGFQTHE+LS+VSPNNPV L HASGHA FANAKAME+AGVN LSKE L N A EGGEII+D++GNPTGIFNE +M+L T HIPE+
Sbjct:   68 TEVIDLQGSTMTPGFIESHGHIMGLGYFELNLDLSTVKSFDELVEKVRVAAAQAPPGQWILGNGWHQDKWEVKPEKMVKGFQTHEMLSAVSPNNPVWLRHASGHAGFANAKAMELAGVNPLSKEGL-NIAVEGGEIIKDKVGNPTGIFNERAMALITKHIPEN 229          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: A0A3B8W897_9BACT (Amidohydrolase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8W897_9BACT)

HSP 1 Score: 250 bits (639), Expect = 7.160e-78
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T+++DL G T+ PGFIE H H MG+GY+E+NLDLM+VKSY+ELV +V+ A +K QPGQWI+GRGWHQDKW+ KP KMVKGFQTHELLSSVSP+NPV L HASGHA FANA+AM++AGVN LS E+L+    EGGEIIRD+LGNPTGIFNE + SL T  IPES
Sbjct:   69 TQVVDLGGRTLTPGFIETHGHIMGLGYNELNLDLMDVKSYEELVERVRQAASKAQPGQWIVGRGWHQDKWDTKPAKMVKGFQTHELLSSVSPDNPVYLRHASGHAGFANARAMQMAGVNQLSVEQLREANSEGGEIIRDDLGNPTGIFNERAQSLITRFIPES 231          
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Match: UPI001916DBBF (amidohydrolase n=1 Tax=Marivirga sp. S37H4 TaxID=2802615 RepID=UPI001916DBBF)

HSP 1 Score: 248 bits (634), Expect = 4.790e-77
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 1
Query:    1 TKIIDLKGNTMIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWILGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANAKAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHIPES 489
            T++IDLKG TM PG IEGH HFMG+GY+E+N+DL++ KSY E++ K+K AVA  +PGQWI GRGWHQ KW   PD MV GFQTHELLS VSP+NPV L HASGHA FANAKAM+IAGV  LSKE L NQ  EGGEI RDE GNPTGIFNE +MSL T HIPES
Sbjct:   76 TQLIDLKGATMTPGLIEGHGHFMGLGYNELNVDLLDTKSYQEIIEKIKIAVANAEPGQWITGRGWHQSKWTEMPDDMVNGFQTHELLSEVSPDNPVYLRHASGHAGFANAKAMQIAGVMPLSKESLNNQEVEGGEIFRDENGNPTGIFNERAMSLITQHIPES 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59032.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y4XSR2_9BACT2.910e-8274.23Amidohydrolase n=1 Tax=Cyclobacteriaceae bacterium... [more]
A0A401UA46_9BACT3.550e-8273.62Amidohydrolase n=1 Tax=Chryseotalea sanaruensis Ta... [more]
A0A1M5LG07_9BACT1.930e-8171.78Amidohydro_3 domain-containing protein n=2 Tax=Chr... [more]
UPI00191EEF332.070e-8173.29amidohydrolase n=1 Tax=Chryseolinea sp. Jin1 TaxID... [more]
A0A136M1B7_9BACT1.030e-8071.17Amidohydrolase n=1 Tax=Bacteroidetes bacterium OLB... [more]
A0A7Y4QWL5_9BACT3.240e-8073.29Amidohydrolase n=1 Tax=Cyclobacteriaceae bacterium... [more]
A0A1T5K4A3_9BACT2.680e-7869.94Amidohydro_3 domain-containing protein n=1 Tax=Oht... [more]
A0A355BQK9_9BACT4.740e-7873.01Amidohydrolase n=1 Tax=Cytophagales bacterium TaxI... [more]
A0A3B8W897_9BACT7.160e-7870.55Amidohydrolase n=1 Tax=Cytophagales bacterium TaxI... [more]
UPI001916DBBF4.790e-7771.17amidohydrolase n=1 Tax=Marivirga sp. S37H4 TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59032contigP-wetherbeei_contig59032:1..489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1237149.C900_02654
PFAMsAmidohydro_3
Model size489
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.23e-69
EggNOG OGsCOG1574@1|root,COG1574@2|Bacteria,4NFMV@976|Bacteroidetes,47TV8@768503|Cytophagia
DescriptionAmidohydrolase family
Cds size459
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186873.1092706-UTR-P-wetherbeei_contig59032:0..301683186873.1092706-UTR-P-wetherbeei_contig59032:0..30Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig59032 1..30 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186873.1240923-CDS-P-wetherbeei_contig59032:30..4891683186873.1240923-CDS-P-wetherbeei_contig59032:30..489Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59032 31..489 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59032.1.1prot_P-wetherbeei_contig59032.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59032 31..489 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59032.1.1

>prot_P-wetherbeei_contig59032.1.1 ID=prot_P-wetherbeei_contig59032.1.1|Name=mRNA_P-wetherbeei_contig59032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MIPGFIEGHAHFMGIGYSEINLDLMNVKSYDELVAKVKDAVAKIQPGQWI
LGRGWHQDKWNVKPDKMVKGFQTHELLSSVSPNNPVLLYHASGHAAFANA
KAMEIAGVNLLSKEKLKNQAGEGGEIIRDELGNPTGIFNELSMSLFTAHI
PES
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mRNA from alignment at P-wetherbeei_contig59032:1..489+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59032.1.1 ID=mRNA_P-wetherbeei_contig59032.1.1|Name=mRNA_P-wetherbeei_contig59032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig59032:1..489+ (Phaeothamnion wetherbeei SAG_119_79)
ACAAAGATTATTGATTTGAAGGGCAACACCATGATCCCCGGATTCATTGA AGGTCATGCGCATTTTATGGGCATAGGCTATAGTGAGATCAATCTCGATT TAATGAATGTTAAAAGCTATGATGAACTTGTCGCGAAGGTAAAAGACGCA GTAGCGAAAATACAGCCTGGTCAATGGATATTGGGAAGAGGCTGGCACCA GGATAAATGGAATGTAAAGCCTGATAAAATGGTGAAAGGATTTCAAACAC ATGAGTTACTGAGTAGTGTATCGCCTAATAATCCAGTGCTTCTCTATCAT GCGAGCGGACATGCGGCATTCGCCAACGCCAAAGCCATGGAGATAGCGGG CGTTAATCTGCTATCGAAAGAAAAATTGAAAAATCAGGCGGGAGAAGGTG GAGAGATTATCCGTGATGAGTTAGGCAATCCTACTGGAATTTTTAACGAG CTCTCGATGTCGTTATTTACTGCACATATTCCGGAGAGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59032:1..489+

>mRNA_P-wetherbeei_contig59032.1.1 ID=mRNA_P-wetherbeei_contig59032.1.1|Name=mRNA_P-wetherbeei_contig59032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig59032:1..489+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCCCGGATTCATTGAAGGTCATGCGCATTTTATGGGCATAGGCTA
TAGTGAGATCAATCTCGATTTAATGAATGTTAAAAGCTATGATGAACTTG
TCGCGAAGGTAAAAGACGCAGTAGCGAAAATACAGCCTGGTCAATGGATA
TTGGGAAGAGGCTGGCACCAGGATAAATGGAATGTAAAGCCTGATAAAAT
GGTGAAAGGATTTCAAACACATGAGTTACTGAGTAGTGTATCGCCTAATA
ATCCAGTGCTTCTCTATCATGCGAGCGGACATGCGGCATTCGCCAACGCC
AAAGCCATGGAGATAGCGGGCGTTAATCTGCTATCGAAAGAAAAATTGAA
AAATCAGGCGGGAGAAGGTGGAGAGATTATCCGTGATGAGTTAGGCAATC
CTACTGGAATTTTTAACGAGCTCTCGATGTCGTTATTTACTGCACATATT
CCGGAGAGT
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