mRNA_P-wetherbeei_contig59020.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59020.1.1
Unique NamemRNA_P-wetherbeei_contig59020.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A7V9B1C6_9CHLR (ParA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9B1C6_9CHLR)

HSP 1 Score: 77.8 bits (190), Expect = 5.220e-16
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSS 138
            R+VALANQKGGVGKTTT VN AA LA RG+R LLIDIDPQGNATSS
Sbjct:    5 RIVALANQKGGVGKTTTAVNTAAALAARGYRTLLIDIDPQGNATSS 50
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A2V5KZ27_9BACT (Sporulation initiation inhibitor Soj (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5KZ27_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 7.880e-16
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF 141
            R+VALANQKGGVGKTTT VN  A LA+ G R+LL+D+DPQ NATSSF
Sbjct:    2 RIVALANQKGGVGKTTTAVNLGAALAELGHRILLVDLDPQANATSSF 48
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A7W1I648_9CHLR (ParA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1I648_9CHLR)

HSP 1 Score: 77.8 bits (190), Expect = 8.910e-16
Identity = 39/45 (86.67%), Postives = 41/45 (91.11%), Query Frame = 1 
Query:    4 VVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSS 138
            +VALANQKGGVGKTTT VN A  LA+RGFRVLLIDIDPQGNATSS
Sbjct:   20 IVALANQKGGVGKTTTAVNTAVALARRGFRVLLIDIDPQGNATSS 64
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A7W1HLZ8_9BACT (AAA family ATPase (Fragment) n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1HLZ8_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 1.090e-15
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF 141
            +V+A+ANQKGGVGKTTT VN AA LA++  R+LL+D+DPQGNATSSF
Sbjct:    2 KVIAIANQKGGVGKTTTAVNLAAALAEKKQRILLVDLDPQGNATSSF 48
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A838DI46_9BACT (ParA family protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A838DI46_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 2.490e-15
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF 141
            +++A+ANQKGGVGKTTT VN    +AQRG+RVLLID+DPQGNATSSF
Sbjct:    2 KIIAVANQKGGVGKTTTAVNLGCAVAQRGYRVLLIDLDPQGNATSSF 48
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A6J4VZN9_9CHLR (Chromosome (Plasmid) partitioning protein ParA n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VZN9_9CHLR)

HSP 1 Score: 76.6 bits (187), Expect = 2.520e-15
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSS 138
            R++ALANQKGGVGKTT+TVN +A LA RGFR LLIDIDPQGNATSS
Sbjct:   42 RILALANQKGGVGKTTSTVNLSAYLAARGFRTLLIDIDPQGNATSS 87
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A6J4VMX3_9CHLR (Chromosome (Plasmid) partitioning protein ParA n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VMX3_9CHLR)

HSP 1 Score: 75.9 bits (185), Expect = 2.990e-15
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSS 138
            RV+ALANQKGGVGKTTT VN +A LA RG RVLLIDIDPQGNATSS
Sbjct:    3 RVLALANQKGGVGKTTTAVNLSAYLAARGLRVLLIDIDPQGNATSS 48
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A838I3B1_9BACT (ParA family protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A838I3B1_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 3.100e-15
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF 141
            +++A+ANQKGGVGKTTT VN    LAQR FR+LLID+DPQGNATSSF
Sbjct:    2 KIIAIANQKGGVGKTTTAVNLGCALAQRDFRILLIDLDPQGNATSSF 48
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A0G0DD62_9BACT (Sporulation initiation inhibitor n=1 Tax=Parcubacteria group bacterium GW2011_GWA2_36_10 TaxID=1618808 RepID=A0A0G0DD62_9BACT)

HSP 1 Score: 73.2 bits (178), Expect = 3.260e-15
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF 141
            RV+A+ NQKGGVGKTTTTVN AA LA+ G RVL+IDIDPQGNA+S F
Sbjct:    3 RVIAIVNQKGGVGKTTTTVNLAAYLAEAGKRVLVIDIDPQGNASSGF 49
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BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Match: A0A359KPM7_9CHLR (Chromosome partitioning protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A359KPM7_9CHLR)

HSP 1 Score: 75.5 bits (184), Expect = 3.850e-15
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1 
Query:    1 RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSS 138
            +V+ALANQKGGVGKTTT VN A  LA+RG+RVLLID+DPQGNATSS
Sbjct:    3 KVLALANQKGGVGKTTTAVNVACNLAERGYRVLLIDLDPQGNATSS 48
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59020.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V9B1C6_9CHLR5.220e-1684.78ParA family protein n=1 Tax=Chloroflexia bacterium... [more]
A0A2V5KZ27_9BACT7.880e-1674.47Sporulation initiation inhibitor Soj (Fragment) n=... [more]
A0A7W1I648_9CHLR8.910e-1686.67ParA family protein n=1 Tax=Chloroflexia bacterium... [more]
A0A7W1HLZ8_9BACT1.090e-1572.34AAA family ATPase (Fragment) n=1 Tax=Chthoniobacte... [more]
A0A838DI46_9BACT2.490e-1574.47ParA family protein n=1 Tax=Chthoniobacterales bac... [more]
A0A6J4VZN9_9CHLR2.520e-1582.61Chromosome (Plasmid) partitioning protein ParA n=1... [more]
A0A6J4VMX3_9CHLR2.990e-1584.78Chromosome (Plasmid) partitioning protein ParA n=1... [more]
A0A838I3B1_9BACT3.100e-1574.47ParA family protein n=1 Tax=Chthoniobacterales bac... [more]
A0A0G0DD62_9BACT3.260e-1576.60Sporulation initiation inhibitor n=1 Tax=Parcubact... [more]
A0A359KPM7_9CHLR3.850e-1580.43Chromosome partitioning protein n=3 Tax=Chloroflex... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59020contigP-wetherbeei_contig59020:288..428 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog479434.Sthe_2464
PFAMsAAA_31
Model size141
Max annot lvl189775|Thermomicrobia
KEGG koko:K03496
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.34e-15
EggNOG OGsCOG1192@1|root,COG1192@2|Bacteria,2G62U@200795|Chloroflexi,27Y51@189775|Thermomicrobia
DescriptionAnion-transporting ATPase
Cds size141
COG categoryD
BRITEko00000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186873.0785344-CDS-P-wetherbeei_contig59020:287..4281683186873.0785344-CDS-P-wetherbeei_contig59020:287..428Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59020 288..428 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59020.1.1prot_P-wetherbeei_contig59020.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59020 288..428 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59020.1.1

>prot_P-wetherbeei_contig59020.1.1 ID=prot_P-wetherbeei_contig59020.1.1|Name=mRNA_P-wetherbeei_contig59020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
RVVALANQKGGVGKTTTTVNAAAILAQRGFRVLLIDIDPQGNATSSF
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mRNA from alignment at P-wetherbeei_contig59020:288..428+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59020.1.1 ID=mRNA_P-wetherbeei_contig59020.1.1|Name=mRNA_P-wetherbeei_contig59020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig59020:288..428+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGTCGTCGCGCTGGCGAACCAGAAGGGCGGCGTCGGCAAGACCACGAC
AACCGTCAATGCCGCCGCGATCCTCGCCCAGCGCGGTTTCCGCGTCCTGC
TGATCGACATCGATCCCCAGGGCAACGCGACCTCCTCCTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59020:288..428+

>mRNA_P-wetherbeei_contig59020.1.1 ID=mRNA_P-wetherbeei_contig59020.1.1|Name=mRNA_P-wetherbeei_contig59020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=141bp|location=Sequence derived from alignment at P-wetherbeei_contig59020:288..428+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGTCGTCGCGCTGGCGAACCAGAAGGGCGGCGTCGGCAAGACCACGAC
AACCGTCAATGCCGCCGCGATCCTCGCCCAGCGCGGTTTCCGCGTCCTGC
TGATCGACATCGATCCCCAGGGCAACGCGACCTCCTCCTTC
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