mRNA_P-wetherbeei_contig59015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59015.1.1
Unique NamemRNA_P-wetherbeei_contig59015.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7C4TWU2_9BACT (mRNA interferase n=1 Tax=Caldisericum exile TaxID=693075 RepID=A0A7C4TWU2_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 6.710e-19
Identity = 41/87 (47.13%), Postives = 63/87 (72.41%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + +  ++NPN P T+V+A+S++GR  P H+++  +E NGL + SYIKCEQI T+SKERL  +IG+L+     K++ ALK VL+L
Sbjct:   29 LIIQTDAGNTNPNYPNTIVVAISTKGRPVPFHIRVEPSEENGLKSISYIKCEQILTISKERLVEKIGVLEEEYRSKIEEALKLVLNL 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A2H9N6N2_9BACT (mRNA interferase n=4 Tax=Caldiserica TaxID=67814 RepID=A0A2H9N6N2_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 8.130e-18
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + +  + NPN P T+V+A+S++GR  P H+K+  +  NGL + S+IKCEQI T+SKERL  +IG L+   L+ V+ ALK +LSL
Sbjct:   29 LIIQTDAGNINPNYPNTIVVAISTKGREVPFHIKVKPSSTNGLKSLSFIKCEQILTISKERLVEKIGTLEEHYLKLVEEALKLILSL 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7V4EIS7_9BACT (mRNA interferase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4EIS7_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 1.120e-17
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + + A+     P T+V+AVS  G+  P HV +  + +NGL   SYIKCEQI TVS++RLA RIG L   DL +VD AL+KVL L
Sbjct:   30 LVVQTDAANQVQRYPNTIVVAVSRSGKPVPFHVPVSPDPLNGLRDSSYIKCEQIMTVSRDRLAERIGRLSETDLARVDEALRKVLGL 116          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7V6PTU6_9BACT (mRNA interferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V6PTU6_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 4.650e-17
Identity = 38/87 (43.68%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + +  + NPN P T+++A+S++GR  P H+KI  +  NGL + S++KCEQI T+SKERL  +IG L+   ++KV+ A++ VL L
Sbjct:   29 LIIQTDAGNINPNYPNTIILAISTKGREIPFHIKIEPSITNGLKSVSFVKCEQILTISKERLVEKIGSLEPKYIEKVETAVRLVLGL 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7T1AP03_9BACT (mRNA interferase n=2 Tax=Atribacterota TaxID=67818 RepID=A0A7T1AP03_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 6.590e-17
Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + ++A+ NP  P  +++ +S++GR  P H+ +    +NGL   SYIKCEQI T+SK+RL    G L+A  L+KVD+ALK VL++
Sbjct:   31 LVVQTDLANQNPKYPNVIIVTISTKGRPLPFHISVTPTALNGLNQISYIKCEQILTISKDRLFRYCGFLEADILKKVDVALKGVLNI 117          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7C6EB78_DESAE (mRNA interferase n=1 Tax=Desulfurella acetivorans TaxID=33002 RepID=A0A7C6EB78_DESAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.090e-17
Identity = 37/87 (42.53%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + +  + N N P T+V+ +S++G+  P H+K+  ++ NGL++ SY+KCEQI T+SKERL  ++G+L+    +KV+ ALK VL+L
Sbjct:   29 LIIQVDSGNINQNYPNTIVVTISTKGKSIPFHIKVSPSKENGLSSISYVKCEQILTISKERLTKKLGILEEQYKEKVEEALKSVLNL 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A7C3M4M1_9FIRM (mRNA interferase n=2 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3M4M1_9FIRM)

HSP 1 Score: 76.6 bits (187), Expect = 3.960e-16
Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + +  + NP+ P T+V+ +S++GR  P H+KI  +  NGL + S++KCEQI T+SKERL  +IG LD    +KV+ A+K VL L
Sbjct:   29 LVIQTDAGNMNPDYPNTIVLGISTKGREIPFHIKIEPSINNGLKSVSFVKCEQIFTISKERLVEKIGSLDPQYAEKVETAIKLVLGL 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A2H5X4F6_9BACT (mRNA interferase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5X4F6_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 4.600e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSL 261
            L+ + + A+ NP  P T+V+A+S++GR  P H+ I   E NGL   SY+KCEQI T+SKERL  R+G L    +++V  AL  VL +
Sbjct:   39 LVVQTDAANQNPRYPNTIVVAISTKGRQVPFHILIQPAEENGLTMPSYVKCEQILTISKERLEERVGRLSEQGMKRVKEALSLVLDI 125          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A524KXH0_9DELT (mRNA interferase n=1 Tax=Syntrophobacterales bacterium TaxID=2282155 RepID=A0A524KXH0_9DELT)

HSP 1 Score: 73.9 bits (180), Expect = 4.190e-15
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 1
Query:   10 RANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLS 258
            + + A+ NP  P T+V+ VS++G+  P HV +  +  NGL   S++KCEQI T+SKERL  R+G LD   ++ +  A+++VLS
Sbjct:   33 QTDAANRNPRYPNTIVLTVSTKGQEVPFHVPVNPSAGNGLQEKSFVKCEQIMTISKERLIRRMGCLDEEQMETIAAAMRRVLS 115          
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Match: A0A353MGF4_9DELT (mRNA interferase n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MGF4_9DELT)

HSP 1 Score: 73.9 bits (180), Expect = 4.300e-15
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIKCEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVL 255
            L+ + + A+SN   P T+V+AVS++G+  P HV I  N  NGL   S+IKCEQ+ TV+KERL  ++G ++  +LQ+++ A++ VL
Sbjct:   30 LIIQTDAANSNAGYPNTIVLAVSTKGKPVPFHVAIKPNRRNGLTDASFIKCEQLLTVAKERLVRKLGSVEDGELQQINRAVRLVL 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TWU2_9BACT6.710e-1947.13mRNA interferase n=1 Tax=Caldisericum exile TaxID=... [more]
A0A2H9N6N2_9BACT8.130e-1847.13mRNA interferase n=4 Tax=Caldiserica TaxID=67814 R... [more]
A0A7V4EIS7_9BACT1.120e-1749.43mRNA interferase n=1 Tax=Armatimonadetes bacterium... [more]
A0A7V6PTU6_9BACT4.650e-1743.68mRNA interferase n=1 Tax=bacterium TaxID=1869227 R... [more]
A0A7T1AP03_9BACT6.590e-1743.68mRNA interferase n=2 Tax=Atribacterota TaxID=67818... [more]
A0A7C6EB78_DESAE9.090e-1742.53mRNA interferase n=1 Tax=Desulfurella acetivorans ... [more]
A0A7C3M4M1_9FIRM3.960e-1644.83mRNA interferase n=2 Tax=Firmicutes bacterium TaxI... [more]
A0A2H5X4F6_9BACT4.600e-1644.83mRNA interferase n=2 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A524KXH0_9DELT4.190e-1542.17mRNA interferase n=1 Tax=Syntrophobacterales bacte... [more]
A0A353MGF4_9DELT4.300e-1543.53mRNA interferase n=2 Tax=Geobacteraceae TaxID=2134... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59015contigP-wetherbeei_contig59015:231..497 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog485913.Krac_9032
PFAMsPemK_toxin
Model size267
Max annot lvl200795|Chloroflexi
KEGG koko:K07171
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.54e-12
EggNOG OGsCOG2337@1|root,COG2337@2|Bacteria,2G9EZ@200795|Chloroflexi
DescriptionPemK-like, MazF-like toxin of type II toxin-antitoxin system
Cds size267
COG categoryL
BRITEko00000,ko01000,ko02048
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.9869492-CDS-P-wetherbeei_contig59015:230..4971683186872.9869492-CDS-P-wetherbeei_contig59015:230..497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59015 231..497 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59015.1.1prot_P-wetherbeei_contig59015.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59015 231..497 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59015.1.1

>prot_P-wetherbeei_contig59015.1.1 ID=prot_P-wetherbeei_contig59015.1.1|Name=mRNA_P-wetherbeei_contig59015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp
LLPRANVASSNPNCPLTMVIAVSSQGRIFPTHVKILANEINGLAADSYIK
CEQIQTVSKERLAHRIGLLDAADLQKVDLALKKVLSLT*
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mRNA from alignment at P-wetherbeei_contig59015:231..497-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59015.1.1 ID=mRNA_P-wetherbeei_contig59015.1.1|Name=mRNA_P-wetherbeei_contig59015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig59015:231..497- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTTCCGCGAGCGAACGTGGCGAGTTCGAATCCTAACTGTCCGTTGAC CATGGTCATAGCGGTTTCGAGCCAGGGTAGAATTTTTCCGACCCACGTAA AAATTCTAGCTAACGAGATCAACGGTTTGGCGGCCGATTCATACATTAAG TGCGAACAGATCCAGACGGTATCGAAAGAGAGGCTGGCTCATCGCATTGG ACTGCTCGATGCTGCGGATTTGCAGAAAGTTGATCTTGCGTTGAAGAAAG TGTTGTCTCTCACCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59015:231..497-

>mRNA_P-wetherbeei_contig59015.1.1 ID=mRNA_P-wetherbeei_contig59015.1.1|Name=mRNA_P-wetherbeei_contig59015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig59015:231..497- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTTCCGCGAGCGAACGTGGCGAGTTCGAATCCTAACTGTCCGTTGAC
CATGGTCATAGCGGTTTCGAGCCAGGGTAGAATTTTTCCGACCCACGTAA
AAATTCTAGCTAACGAGATCAACGGTTTGGCGGCCGATTCATACATTAAG
TGCGAACAGATCCAGACGGTATCGAAAGAGAGGCTGGCTCATCGCATTGG
ACTGCTCGATGCTGCGGATTTGCAGAAAGTTGATCTTGCGTTGAAGAAAG
TGTTGTCTCTCACCTAG
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