mRNA_P-wetherbeei_contig5900.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI) HSP 1 Score: 561 bits (1446), Expect = 3.510e-192 Identity = 291/566 (51.41%), Postives = 383/566 (67.67%), Query Frame = 1
Query: 196 SVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
S + +FR FKL GL R DA RA++R++ RE D A+ A++ +K ++ER +L S+VVDV+TVS+VVADL+ +++L + S Q +AF PR+ +DP R TL +ED KR MH A ++ +M+R+RFL+ +QRVQR+ LF P+I SSRRE+++L+ LD+LVG+ + +LGMLTQP+EG+Y LED +++PLD S A +T G+FTEH VV+VEG+M GV +V M+G PP EARE++L LG DLFG GV PQQ R+ +L +A DAMFVI+SDV+LD+P V++KL ALF GF PPP FVLMGNF S+P++HA +SV Q F +L +I + P LA SA+FVFVPGP DPGAG+TLPRPPLP FT +LRE +KH +FATNPCRLRF+ QEMV FR+D+L KMQRH++ PS PD MD TEH KTL QGHLCPLPL+ RPI W+LD L+LYPLPHVAVLAD +QY+W + + NPGSF +D SF+VYRPAT V+FS ++
Sbjct: 2 SSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPD------MDVTEHCT-------------------------------------------KTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA) HSP 1 Score: 508 bits (1308), Expect = 3.010e-171 Identity = 275/566 (48.59%), Postives = 366/566 (64.66%), Query Frame = 1
Query: 199 VVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGA--GNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGAS-AFNPGSFQADFSFIVYRPATCEVDFSS 1887
+++ + + F+L GL +A++A+I ++ E D AL AV+ IKDK+ER +L+S+V+D V++V DLS + +L SL+ L+AF R+ YDP RK+L E +HA A+ +M RDR LL QQR QR++LF PVIASSR++ ++LT+LD+L+G+ G K ++GMLTQP EG Y +EDLT QVP+D S AG TAGMFTE+ VVV EGEMVDG R+ MMG PPPE R+ T +G DLFG G+T QQ L L A ++MF++LSDVHLD+P V++KLR +F GF+ + PP+FVLMG+F+S P++ ESV Q+A F AL ++IAE P LA+ A FV VPGPNDP G LPR P+P F L E V + AT+PCRLRFY QE+VLFR+D+ KMQRH ++ P P D P +MDA+EHLV KTL DQGHLCPLPL+ RPI Q D L LYPLP V +LAD ++Q+ W+YH ++ A NPGSF +DFSF+VYRP++ +V+FSS
Sbjct: 3 LMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAP--NMDASEHLV-------------------------------------------KTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFSS 523
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA) HSP 1 Score: 395 bits (1015), Expect = 2.830e-127 Identity = 223/530 (42.08%), Postives = 308/530 (58.11%), Query Frame = 1
Query: 181 TQMDPSVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADS 1770
T M + K + FK G+SAR DA+RA+ +L REP+ D A+ +++ + TV VVA+L++D++++ +ES++ +P+ Y+ RKT + D G +H A M+R+R+ L +QRV RN +F PV+ SS+RE+ QLT L++L+G GTK VLGML QP+EGRYC+ED +S+VP+D S A T+G+FTE S+V+ +GE+ +G V MMG PPPE R ++L +G D G TP + ++ L A +MFVILSDVHLD P V DK++AL GFA + P V V MGNF S P H + A + LA +IA P LA ++FVFVPG +DPG G+ LPR P+P +FT ALR V++ FA+NPCRLRFY+Q++VLFR DL+ KM+RH+V+ P+ T E TEHLVR T+ DQGHLCP+ +P+ W DH L LYPLP VA+LADS
Sbjct: 42 TAMSARLAKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPAG---LHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPD-VIVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEI----TEHLVR-------------------------------------------TVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILADS 519
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL) HSP 1 Score: 385 bits (989), Expect = 3.490e-123 Identity = 228/569 (40.07%), Postives = 325/569 (57.12%), Query Frame = 1
Query: 205 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRR-EHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPES--VGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGA---VGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
K + R KL GLS PDA+R L+ L EP + L V+ +K+ ++R + SSVV +E + S + L +E ES+Q DAF PR+ Y+ E R +HA A +R Q+ RDRF L RV+RNK+F P I+ S ++++L+ +++L+G G + V+GML Q + RY LEDLTS++ ++ + A T G+FT + VV+VEGE++D +L VH MG PPPE++ E+ +LG D G V+ QQ ++ L A F++LSDVHLD P V+ L LF+G + P +F+LMG+F STPV S + L + L +I + P+LAE ++FV VPGPNDPG+ PR PLP+L T L V + TNPCR+R+Y Q++V+FREDL KM RH++L P PD+ EA+ DA + V SG+ A + +VKT+ DQ HLCP+PL PI W D + L+PLP V +L DS +QYQ Y + F+PG F DFSF++YRP+T +FS +E
Sbjct: 4 KQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAIL-PVLPDEVTEANGDAMD--------------------------------VDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS) HSP 1 Score: 382 bits (982), Expect = 1.530e-122 Identity = 227/559 (40.61%), Postives = 321/559 (57.42%), Query Frame = 1
Query: 223 FKLNGLSARPDAIRALIRLLLREPDW--DRALSAVLGGIKDKLER---GDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSR---REHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQ-TAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLG--HTDLFGR--GVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRP 1860
FK+ GLS + A+ +++ +L EP D L A++ IK+K+ G + VV + + VVAD+S+ K++ EE++Q LDAF PR+ YD RK V +V G + + A + MF R+ L QR+ R +F +P + ++R H LT +++L+G G + +LGM+ Q +EG+Y LED TSQV L+FSQA T G TE+SVV+VEGE +DGVL VH MG P E R +++ +G +TD+F ++ ++ R E+ + D MFV+LSDVHLD P V++K+ + G++ +P P+FV MGNFTS P+S A + + G+F LAAVI + P +A RFVFVPGPNDPG LPR P+P FT++LR VKH FA+NPCR+RF+++E+V FR+DL+ KM+RH +L P ++ H + F VKT+ DQGHL PLPL+ PI WQ DH L LYP P ++ D DQY Y A NPG F A F+F+VYRP
Sbjct: 1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRK---VFSLVEGGKSVCGEAVDKVDMFSQRYSLIHQRILRQDIF-QPKLITARGGGTTHT-LTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEM-KHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPR-----------SSVHKLSQFA--------------------------------------VKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA) HSP 1 Score: 377 bits (969), Expect = 5.840e-120 Identity = 228/585 (38.97%), Postives = 325/585 (55.56%), Query Frame = 1
Query: 217 RVFKLNGLSARPDAIRALIRLLLREPDW--DRALSAVLGGIKDKL----ERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRP--VIASSRRE------HLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAG-QTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLG--HTDLFGR--GVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPA--------TCEVDFSSI 1890
R FK+ GL+ + A+ A++ +L RE L +L IK+++ L VV +S VVAD+S+D + +E++Q LDAF MPR+ YD RK + +R + A A + M+ R+ L QQR+ R LF RP V A RR H+ LT +++L+G G K +LGM+ Q +EGRY LED T+QVP+D + A T G TE+ +V+VEGEMVDG+ +V MG P E R++ L +G +TD+F + Q++ R E+ R D FVILSD+HLD P V +KL +F + L+P P+FV MGNF+S P++ A E + +F LA +I + P+LA+ RF+FVPGPNDPG G+ LPRPP+P FT A+R V H F +NPCR+R+++QE+V R+D++ K++R++++SPS D E +H ++S + DQGHL PLP + PICWQ DH L LYPLP+ ++ D Q Y A NPGSF +DFSF+VYRP +V+FS I
Sbjct: 13 RAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLF-RPRLVTADGRRSDESNATHV-LTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEI-RHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKS-------------------------------------------MLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRPVGECNGDEIKSDVEFSQI 551
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A662YDB3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDB3_9STRA) HSP 1 Score: 372 bits (954), Expect = 7.450e-118 Identity = 227/571 (39.75%), Postives = 315/571 (55.17%), Query Frame = 1
Query: 205 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGD-----LKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIA-SSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
K +FR KL GLS DA+R L L E + L VL +K+ ++R L SSVV +E + S + L E + E +Q DAF PR+ ++ ++ RR+HA AR ++ RDRFL RV+RN+LF P A SS EH++L+ +++L+G G + V+GML Q + R LEDLTS++ +D + A T G+FT + VV+VEGE++D VL VH MG PPPE + +L VLG D G V+ QQ ++ A F++LSDVHLD P V+ +L LF G L P +FVLMG+F S + S+ L + L +I + P L E++RFV VPGPNDPG+ PR PLP L T L + + T +TNPCR+R+Y Q++V+FREDL KMQRH++L P P++ EA+ SG++ + + KTL DQ HLCP+PL PI W D +L L+PLP V VL DS +QYQ Y + F+PG F DFSF++YRP+T +FS +E
Sbjct: 4 KRIFRACKLQGLSLHADALRRLTEELTDETSLE--LDDVLYALKNNIDRSKSAYATLTSSVVTLEALESALDTLLAVSAENEFEQIQVFDAFDTPRLHFNSHSNAYELK--ADATRRLHAGPEARLRLLRDRFLSVDLRVKRNRLFSAPTAAVSSSFEHIELSRIESLLGVTGVRRVIGMLGQDERKRMYLEDLTSRIVIDLTSAAYTDGLFTVNCVVLVEGEVIDDVLHVHSMGFPPPETKATSLDVLGGIDPLGVEVSSQQLEQIRVQEAEDHHATFIVLSDVHLDDPQVMKQLDKLFEGLESLQPT-LFVLMGDFMSASIGGGAGSNSLQDLREYLEELGNLILKYPGLVEASRFVLVPGPNDPGSSRAFPRHPLPELCTRELLRKLPNVTCSTNPCRIRYYTQDLVIFREDLHQKMQRHAILPPM-PEEEEEAAXXXXXXXXXXXA--------------------------LSGASVDISKHLAKTLIDQAHLCPMPLMACPINWDFDASLQLFPLPDVLVLGDSTEQYQLGYSAVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 542
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: H3GZH2_PHYRM (DNA polymerase epsilon subunit n=27 Tax=Phytophthora TaxID=4783 RepID=H3GZH2_PHYRM) HSP 1 Score: 370 bits (951), Expect = 1.590e-117 Identity = 222/566 (39.22%), Postives = 316/566 (55.83%), Query Frame = 1
Query: 205 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIA-SSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
K + R KL GLS DA+R L L E L V+ IK+ ++R + +SVV + + S + L E D E +Q AF PR+ ++ + ++ RR+HA +R Q+ RDRF+ RV+RN+LF P A ++ E+++L+ +++L+G G + V+GML Q + R LED TS++ +D + A T G+FT + VV+VEGE++D VL V MG PPPE +E +L VLG D G V+ QQ+ ++ L A F++LSDVHLD P V+ KL LF+G + P +F+LMG+F ST + S+ L + L +I + P +AE++RFV VPGPNDPG+ PR PLP L T L V + +TNPCR+R+Y Q++V+FR+DL KMQRH++L P P + EA+MD ++ E QS S + + KTL DQ HLCPLPL PI W D +L L+P P V +L DS +QYQ Y F+PG F ADFSF+ YRP+T +FS +E
Sbjct: 4 KRVLRACKLQGLSLHADALRRLTDELTNESSLQ--LEDVIYAIKNNIDRSKMTTSVVTLGALESALDTLLAVSAENDFEQIQVFGAFDTPRLHFNTHNNSYELK--ADAHRRLHAGPESRIQLLRDRFMSVDLRVKRNRLFAPPSAALANTTEYMELSRIESLLGMTGLRRVIGMLGQDERNRMYLEDFTSRIIIDLTNAVYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKETSLEVLGGIDPLGVEVSAQQREQIRTLEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLDSVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEDLGNLILKYPGIAENSRFVLVPGPNDPGSSRAFPRHPLPDLCTRELVRKVPNVMCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPM-PSEHEEAAMDESD------------------------------EAGQSVSQTDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPTPDVLILGDSTEQYQLGYSSVGVFHPGPFHADFSFVFYRPSTNTTEFSRVE 533
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN) HSP 1 Score: 369 bits (947), Expect = 6.080e-117 Identity = 221/566 (39.05%), Postives = 318/566 (56.18%), Query Frame = 1
Query: 205 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRR-EHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
K + R KL GLS DA+R L L E L V+ IK+ ++R + SSVV +E + S + L E D E +Q AF PR+ ++ + + RR+HA AR Q+ R+RF+ RV+RN+LF P A + E+++L+ +++L+G G + V+GML Q + R+ LED TS++ +D + A T G+FT + VV+VEGE++D VL V MG PPPE +E +L LG D G V+ QQ+ ++ EL A F++LSDVHLD P V+ KL LF+G + P +F+LMG+F ST + S+ L + L ++I + P +AE++RF+ VPGPNDPG+ PR PLP L T L V + T +TNPCR+R+Y Q++V+FR+DL KMQRH++L P+ P + EA +++G E V S S + + KT+ DQ HLCPLPL PI W D +L L+P P V +L DS +QYQ Y F+PG F AD+SF+ YRP+T +FS +E
Sbjct: 4 KRVLRACKLQGLSLHADALRRLTEELNNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR--ADTHRRLHAGPEARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPT-PSEQGEAM------------DEDG-------------------ETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA) HSP 1 Score: 367 bits (942), Expect = 2.580e-116 Identity = 217/570 (38.07%), Postives = 322/570 (56.49%), Query Frame = 1
Query: 196 SVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASS--RREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPE--SVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 1893
+ K +FR FKL GL+ DA++ L+R + +P L V+ IK+ ++R L +SVV E + S + L E D +++Q A P++ Y+ KT E V RR+HA R +FR+RF ++RV+R+K F +PV+A++ +RE+L+LT +++L+G G K VLGML Q + LEDLT+++ ++ + GM+T +SVV+VEG++ D V V MG PPPE R +++++LG D G V+ QQ T++ EL + A FVILSDVHLD P V+ +L LF G+A P +FVLMGNFTSTPV + + S+ LAA++ + P L E ++FV VPGP+DPGA + LPR PLP + T + T A+NPCR+R++ +++V+ R+DL KM+R+ ++ D + + + LV KT+ DQGHLCPL L+ +PI W D +L L+PLP V VLAD DQ+Q Y G +A +PG F D+SF++YRPAT + S I+
Sbjct: 2 AAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLV-------------------------------------------KTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5900.1.3 >prot_P-wetherbeei_contig5900.1.3 ID=prot_P-wetherbeei_contig5900.1.3|Name=mRNA_P-wetherbeei_contig5900.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=586bp MEVEYGQGQTNPAATQMDPSVVKDLFRVFKLNGLSARPDAIRALIRLLLRback to top mRNA from alignment at P-wetherbeei_contig5900:579..3482+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5900.1.3 ID=mRNA_P-wetherbeei_contig5900.1.3|Name=mRNA_P-wetherbeei_contig5900.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2904bp|location=Sequence derived from alignment at P-wetherbeei_contig5900:579..3482+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5900:579..3482+ >mRNA_P-wetherbeei_contig5900.1.3 ID=mRNA_P-wetherbeei_contig5900.1.3|Name=mRNA_P-wetherbeei_contig5900.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1758bp|location=Sequence derived from alignment at P-wetherbeei_contig5900:579..3482+ (Phaeothamnion wetherbeei SAG_119_79)back to top |